FFCP PHASE1:Mm9::chr4:119960275..119960288,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=329934|HGNC=|UniProt=Q5RJI9,Q70KY4|association_with_transcript=-321bp_to_ENSMUST00000063846,ENSMUST00000102656_5end|description=CAGE_peak_2_at_Foxo6_5end|id=chr4:119960275..119960288,-|ontology_enrichment_celltype=CL:0000117!2.46e-10!23;CL:0000337!2.46e-10!23;CL:0000540!1.09e-07!33;CL:0000047!1.09e-07!33;CL:0000031!1.09e-07!33;CL:0000404!1.09e-07!33;CL:0002609!3.17e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,1.00e-21,6;CL:0000117,5.01e-13,23;CL:0000337,5.01e-13,23;CL:0000540,8.73e-09,33;CL:0000047,8.73e-09,33;CL:0000031,8.73e-09,33;CL:0000404,8.73e-09,33;CL:0002608,1.05e-07,3;CL:0000393,2.79e-07,39;CL:0000211,2.79e-07,39;CL:0000120,3.22e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.35e-11!52;UBERON:0005068!1.35e-11!52;UBERON:0006241!1.35e-11!52;UBERON:0007135!1.35e-11!52;UBERON:0002346!1.55e-11!71;UBERON:0003075!1.55e-11!71;UBERON:0007284!1.55e-11!71;UBERON:0001017!1.99e-11!73;UBERON:0005743!1.99e-11!73;UBERON:0002780!6.11e-11!39;UBERON:0001890!6.11e-11!39;UBERON:0006240!6.11e-11!39;UBERON:0000073!9.80e-11!75;UBERON:0001016!9.80e-11!75;UBERON:0004121!1.15e-10!102;UBERON:0000924!1.15e-10!102;UBERON:0006601!1.15e-10!102;UBERON:0003056!1.89e-10!49;UBERON:0003080!2.02e-10!40;UBERON:0002020!5.50e-09!34;UBERON:0002616!7.08e-09!49;UBERON:0000955!1.68e-08!50;UBERON:0006238!1.68e-08!50;UBERON:0000033!4.58e-08!63;UBERON:0002791!5.18e-07!29;UBERON:0003528!5.18e-07!29;UBERON:0001893!5.18e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0003528,4.70e-16,29;UBERON:0002791,4.70e-16,29;UBERON:0001893,4.70e-16,29;UBERON:0000956,1.30e-14,21;UBERON:0001869,1.30e-14,21;UBERON:0000203,1.30e-14,21;UBERON:0002020,1.73e-13,34;UBERON:0001954,1.22e-11,7;UBERON:0003022,1.22e-11,7;UBERON:0002421,1.22e-11,7;UBERON:0000349,1.22e-11,7;UBERON:0002600,1.22e-11,7;UBERON:0002780,1.41e-11,39;UBERON:0001890,1.41e-11,39;UBERON:0006240,1.41e-11,39;UBERON:0003080,2.99e-11,40;UBERON:0002616,1.35e-09,46;UBERON:0000955,2.32e-09,47;UBERON:0006238,2.32e-09,47;UBERON:0003056,6.42e-09,49;UBERON:0001049,2.55e-08,52;UBERON:0005068,2.55e-08,52;UBERON:0006241,2.55e-08,52;UBERON:0007135,2.55e-08,52;UBERON:0001017,4.37e-08,73;UBERON:0000073,5.87e-08,54;UBERON:0001016,8.05e-08,75;UBERON:0002619,3.42e-07,17|phase1_expression=0,1.39590163055744,1.81999695755814,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0.57423196411502,0.430761996159075,0.430942465371778,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0.768436610643109,3.83651565541367,3.91517221161903,3.15487442027073,0.856952953211411,0,1.5923803897944,2.1086003624012,0.919218786610021,0,0,0.307213066512487,0.131886287730194,0.457438218012048,1.04182674111352,0,0,0.763991238884051,0.589257170947335,0.711858403995515,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0.452167921657868,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,2.51308704225729,0.347648640384553,0.511430914660661,0.41557608911912,0.324482526135515,0.407357455401265,0,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.340182495756639,0,0.468508622798644,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,1.05144974282064,2.16099685996497,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.329397909448022,0,0,0,0.898819408654221,0.216138049874694,0.398282546508734,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0.252470927204373,0,0,0.215423397732799,0,0,0.283076530788832,0.809621403349789,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0.340439605753788,0,0.388076051348264,0.214337035031592,0.532020700926821,0.713475270408282,0.329098041204242,0.608929898229199,0,0,0,0,0,0.180938774784468,0.119372344003136,0.328281799490123,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.972255941720238,0.516639293910924,0.675824501963113,1.40828686374905,1.3020438484395,0.629156066554265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0,0.515559547031063,0,0.755393897389701,0,0,0,0,0,0,0,0.243106717068294,0,0,0.666740183404846,0.206035057238894,0,0,0,0,0.187283014939765,0.320125762024346,0.17230640686684,0,0.115884325944855,0,0.824171801606613,0.147198920134397,0.342869252385415,0,0,0,0,0.169229215783353,0.182927972872773,0.526139422875686,0,0,0.593175090620871,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0.467863216890817,0.429742108096597,0,0,0|short_description=p2@Foxo6}} | ||
|EntrezGene=329934 | |||
|HGNC= | |||
|UniProt=Q5RJI9,Q70KY4 | |||
|association_with_transcript=-321bp_to_ENSMUST00000063846,ENSMUST00000102656_5end | |||
|description=CAGE_peak_2_at_Foxo6_5end | |||
|id=chr4:119960275..119960288,- | |||
|ontology_enrichment_celltype=CL:0000117!2.46e-10!23;CL:0000337!2.46e-10!23;CL:0000540!1.09e-07!33;CL:0000047!1.09e-07!33;CL:0000031!1.09e-07!33;CL:0000404!1.09e-07!33;CL:0002609!3.17e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.00e-21,6;CL:0000117,5.01e-13,23;CL:0000337,5.01e-13,23;CL:0000540,8.73e-09,33;CL:0000047,8.73e-09,33;CL:0000031,8.73e-09,33;CL:0000404,8.73e-09,33;CL:0002608,1.05e-07,3;CL:0000393,2.79e-07,39;CL:0000211,2.79e-07,39;CL:0000120,3.22e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.35e-11!52;UBERON:0005068!1.35e-11!52;UBERON:0006241!1.35e-11!52;UBERON:0007135!1.35e-11!52;UBERON:0002346!1.55e-11!71;UBERON:0003075!1.55e-11!71;UBERON:0007284!1.55e-11!71;UBERON:0001017!1.99e-11!73;UBERON:0005743!1.99e-11!73;UBERON:0002780!6.11e-11!39;UBERON:0001890!6.11e-11!39;UBERON:0006240!6.11e-11!39;UBERON:0000073!9.80e-11!75;UBERON:0001016!9.80e-11!75;UBERON:0004121!1.15e-10!102;UBERON:0000924!1.15e-10!102;UBERON:0006601!1.15e-10!102;UBERON:0003056!1.89e-10!49;UBERON:0003080!2.02e-10!40;UBERON:0002020!5.50e-09!34;UBERON:0002616!7.08e-09!49;UBERON:0000955!1.68e-08!50;UBERON:0006238!1.68e-08!50;UBERON:0000033!4.58e-08!63;UBERON:0002791!5.18e-07!29;UBERON:0003528!5.18e-07!29;UBERON:0001893!5.18e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,4.70e-16,29;UBERON:0002791,4.70e-16,29;UBERON:0001893,4.70e-16,29;UBERON:0000956,1.30e-14,21;UBERON:0001869,1.30e-14,21;UBERON:0000203,1.30e-14,21;UBERON:0002020,1.73e-13,34;UBERON:0001954,1.22e-11,7;UBERON:0003022,1.22e-11,7;UBERON:0002421,1.22e-11,7;UBERON:0000349,1.22e-11,7;UBERON:0002600,1.22e-11,7;UBERON:0002780,1.41e-11,39;UBERON:0001890,1.41e-11,39;UBERON:0006240,1.41e-11,39;UBERON:0003080,2.99e-11,40;UBERON:0002616,1.35e-09,46;UBERON:0000955,2.32e-09,47;UBERON:0006238,2.32e-09,47;UBERON:0003056,6.42e-09,49;UBERON:0001049,2.55e-08,52;UBERON:0005068,2.55e-08,52;UBERON:0006241,2.55e-08,52;UBERON:0007135,2.55e-08,52;UBERON:0001017,4.37e-08,73;UBERON:0000073,5.87e-08,54;UBERON:0001016,8.05e-08,75;UBERON:0002619,3.42e-07,17 | |||
|phase1_expression=0,1.39590163055744,1.81999695755814,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0.57423196411502,0.430761996159075,0.430942465371778,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0.768436610643109,3.83651565541367,3.91517221161903,3.15487442027073,0.856952953211411,0,1.5923803897944,2.1086003624012,0.919218786610021,0,0,0.307213066512487,0.131886287730194,0.457438218012048,1.04182674111352,0,0,0.763991238884051,0.589257170947335,0.711858403995515,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0.452167921657868,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,2.51308704225729,0.347648640384553,0.511430914660661,0.41557608911912,0.324482526135515,0.407357455401265,0,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.340182495756639,0,0.468508622798644,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,1.05144974282064,2.16099685996497,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.329397909448022,0,0,0,0.898819408654221,0.216138049874694,0.398282546508734,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0.252470927204373,0,0,0.215423397732799,0,0,0.283076530788832,0.809621403349789,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0.340439605753788,0,0.388076051348264,0.214337035031592,0.532020700926821,0.713475270408282,0.329098041204242,0.608929898229199,0,0,0,0,0,0.180938774784468,0.119372344003136,0.328281799490123,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.972255941720238,0.516639293910924,0.675824501963113,1.40828686374905,1.3020438484395,0.629156066554265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0,0.515559547031063,0,0.755393897389701,0,0,0,0,0,0,0,0.243106717068294,0,0,0.666740183404846,0.206035057238894,0,0,0,0,0.187283014939765,0.320125762024346,0.17230640686684,0,0.115884325944855,0,0.824171801606613,0.147198920134397,0.342869252385415,0,0,0,0,0.169229215783353,0.182927972872773,0.526139422875686,0,0,0.593175090620871,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0.467863216890817,0.429742108096597,0,0,0 | |||
|short_description=p2@Foxo6 | |||
}} |
Revision as of 03:38, 14 September 2013
Short description: | p2@Foxo6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Foxo6_5end |
Coexpression cluster: | NA |
Association with transcript: | -321bp_to_ENSMUST00000063846, ENSMUST00000102656_5end |
EntrezGene: | Foxo6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.00e-21 | 6 |
CNS neuron (sensu Vertebrata) | 5.01e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.01e-13 | 23 |
neuron | 8.73e-09 | 33 |
neuronal stem cell | 8.73e-09 | 33 |
neuroblast | 8.73e-09 | 33 |
electrically signaling cell | 8.73e-09 | 33 |
hippocampal neuron | 1.05e-07 | 3 |
electrically responsive cell | 2.79e-07 | 39 |
electrically active cell | 2.79e-07 | 39 |
granule cell | 3.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 4.70e-16 | 29 |
regional part of telencephalon | 4.70e-16 | 29 |
telencephalon | 4.70e-16 | 29 |
cerebral cortex | 1.30e-14 | 21 |
cerebral hemisphere | 1.30e-14 | 21 |
pallium | 1.30e-14 | 21 |
gray matter | 1.73e-13 | 34 |
Ammon's horn | 1.22e-11 | 7 |
lobe parts of cerebral cortex | 1.22e-11 | 7 |
hippocampal formation | 1.22e-11 | 7 |
limbic system | 1.22e-11 | 7 |
limbic lobe | 1.22e-11 | 7 |
regional part of forebrain | 1.41e-11 | 39 |
forebrain | 1.41e-11 | 39 |
future forebrain | 1.41e-11 | 39 |
anterior neural tube | 2.99e-11 | 40 |
regional part of brain | 1.35e-09 | 46 |
brain | 2.32e-09 | 47 |
future brain | 2.32e-09 | 47 |
pre-chordal neural plate | 6.42e-09 | 49 |
neural tube | 2.55e-08 | 52 |
neural rod | 2.55e-08 | 52 |
future spinal cord | 2.55e-08 | 52 |
neural keel | 2.55e-08 | 52 |
central nervous system | 4.37e-08 | 73 |
regional part of nervous system | 5.87e-08 | 54 |
nervous system | 8.05e-08 | 75 |
regional part of cerebral cortex | 3.42e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.