FFCP PHASE1:Mm9::chr4:130488215..130488226,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2120|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:130488215..130488226,+|id=chr4:130488215..130488226,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002476,9.43e-09,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.76e-13!29;UBERON:0003104!2.56e-12!131;UBERON:0009142!2.56e-12!131;UBERON:0003408!2.66e-11!24;UBERON:0001004!3.74e-11!42;UBERON:0001041!8.05e-11!92;UBERON:0000926!1.12e-10!193;UBERON:0004120!1.12e-10!193;UBERON:0006603!1.12e-10!193;UBERON:0002370!1.82e-10!23;UBERON:0000974!1.82e-10!23;UBERON:0004807!1.82e-10!23;UBERON:0005058!1.82e-10!23;UBERON:0003351!1.82e-10!23;UBERON:0009113!1.82e-10!23;UBERON:0003295!1.82e-10!23;UBERON:0009722!1.82e-10!23;UBERON:0005562!1.82e-10!23;UBERON:0007690!1.82e-10!23;UBERON:0000065!2.01e-10!41;UBERON:0002390!2.43e-10!45;UBERON:0003061!2.43e-10!45;UBERON:0002193!3.19e-10!48;UBERON:0000077!4.59e-10!97;UBERON:0005057!5.25e-10!51;UBERON:0003081!9.06e-10!88;UBERON:0006562!9.33e-10!24;UBERON:0001557!9.33e-10!24;UBERON:0001042!9.33e-10!24;UBERON:0008814!9.33e-10!24;UBERON:0009145!9.33e-10!24;UBERON:0002405!6.74e-09!70;UBERON:0002530!3.23e-08!65;UBERON:0000072!5.70e-08!27;UBERON:0005911!4.70e-07!69;UBERON:0001048!5.70e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0003408,1.92e-18,24;UBERON:0004177,9.46e-18,29;UBERON:0005057,9.46e-18,29;UBERON:0002193,4.26e-16,48;UBERON:0002405,4.26e-16,48;UBERON:0002370,5.66e-16,23;UBERON:0000974,5.66e-16,23;UBERON:0004807,5.66e-16,23;UBERON:0005058,5.66e-16,23;UBERON:0003351,5.66e-16,23;UBERON:0009113,5.66e-16,23;UBERON:0003295,5.66e-16,23;UBERON:0009722,5.66e-16,23;UBERON:0005562,5.66e-16,23;UBERON:0007690,5.66e-16,23;UBERON:0001004,6.81e-16,42;UBERON:0006562,3.07e-15,24;UBERON:0001557,3.07e-15,24;UBERON:0001042,3.07e-15,24;UBERON:0008814,3.07e-15,24;UBERON:0009145,3.07e-15,24;UBERON:0002390,7.69e-15,45;UBERON:0003061,7.69e-15,45;UBERON:0000077,2.41e-14,35;UBERON:0000065,5.69e-14,41;UBERON:0000072,2.32e-13,27;UBERON:0007811,1.16e-11,36;UBERON:0001041,3.20e-11,80;UBERON:0000153,1.88e-09,43;UBERON:0005911,9.25e-09,69;UBERON:0003081,1.48e-07,87;UBERON:0003929,4.73e-07,55;UBERON:0004921,6.04e-07,114;UBERON:0002530,7.62e-07,65;UBERON:0001007,9.01e-07,116;UBERON:0001555,9.01e-07,116;UBERON:0007026,9.01e-07,116|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0.171217968225505,0.239316476986009,0.856003649656029,0.437102012094987,0,0,0,0.473193248037357,0.411343300817216,0,0.0850432901510698,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,12.1700805314171,0.445326417194474,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0.884610551949874,0.485300549842228,1.76673214768315,0.484875253135222,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0,0.219550115291051,0,0,0.205809224758569,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0,0,0.648540907100142,0,4.31304619582064,0,0.312037673114561,0.252578877947112,0,0,1.10851914099963,0,0.162964976442026,0,0,0,0,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,1.14704320301017,1.55416483679306,0.723245292907558,1.50791283939272,3.80733978673097,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0.683483523191411,0,0.370389054739423,1.13021074202815,2.05041341581538,0.915112692826091,0.169978429993855,0.279902904647316,0.276399947608848,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0.404593039154462,0.0826534557253359,0,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0.352071715937262,0,0,0,0,1.26404448251271,0,0.205421914329655,0.77952493786677,0.716106782669926,1.98681354781265,2.28371354087941,2.51072196196781,3.83672509802961,3.81034033274999,4.03304740547362,2.63136277997332,3.46362629905186,4.67507608726276,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0,0,0,0,1.02860775715625,0,0,0,0,0,0.365855945745545,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.429742108096597,0,0,0|short_description=p@chr4:130488215..130488226,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2120 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:130488215..130488226,+ | |||
|id=chr4:130488215..130488226,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,9.43e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.76e-13!29;UBERON:0003104!2.56e-12!131;UBERON:0009142!2.56e-12!131;UBERON:0003408!2.66e-11!24;UBERON:0001004!3.74e-11!42;UBERON:0001041!8.05e-11!92;UBERON:0000926!1.12e-10!193;UBERON:0004120!1.12e-10!193;UBERON:0006603!1.12e-10!193;UBERON:0002370!1.82e-10!23;UBERON:0000974!1.82e-10!23;UBERON:0004807!1.82e-10!23;UBERON:0005058!1.82e-10!23;UBERON:0003351!1.82e-10!23;UBERON:0009113!1.82e-10!23;UBERON:0003295!1.82e-10!23;UBERON:0009722!1.82e-10!23;UBERON:0005562!1.82e-10!23;UBERON:0007690!1.82e-10!23;UBERON:0000065!2.01e-10!41;UBERON:0002390!2.43e-10!45;UBERON:0003061!2.43e-10!45;UBERON:0002193!3.19e-10!48;UBERON:0000077!4.59e-10!97;UBERON:0005057!5.25e-10!51;UBERON:0003081!9.06e-10!88;UBERON:0006562!9.33e-10!24;UBERON:0001557!9.33e-10!24;UBERON:0001042!9.33e-10!24;UBERON:0008814!9.33e-10!24;UBERON:0009145!9.33e-10!24;UBERON:0002405!6.74e-09!70;UBERON:0002530!3.23e-08!65;UBERON:0000072!5.70e-08!27;UBERON:0005911!4.70e-07!69;UBERON:0001048!5.70e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,1.92e-18,24;UBERON:0004177,9.46e-18,29;UBERON:0005057,9.46e-18,29;UBERON:0002193,4.26e-16,48;UBERON:0002405,4.26e-16,48;UBERON:0002370,5.66e-16,23;UBERON:0000974,5.66e-16,23;UBERON:0004807,5.66e-16,23;UBERON:0005058,5.66e-16,23;UBERON:0003351,5.66e-16,23;UBERON:0009113,5.66e-16,23;UBERON:0003295,5.66e-16,23;UBERON:0009722,5.66e-16,23;UBERON:0005562,5.66e-16,23;UBERON:0007690,5.66e-16,23;UBERON:0001004,6.81e-16,42;UBERON:0006562,3.07e-15,24;UBERON:0001557,3.07e-15,24;UBERON:0001042,3.07e-15,24;UBERON:0008814,3.07e-15,24;UBERON:0009145,3.07e-15,24;UBERON:0002390,7.69e-15,45;UBERON:0003061,7.69e-15,45;UBERON:0000077,2.41e-14,35;UBERON:0000065,5.69e-14,41;UBERON:0000072,2.32e-13,27;UBERON:0007811,1.16e-11,36;UBERON:0001041,3.20e-11,80;UBERON:0000153,1.88e-09,43;UBERON:0005911,9.25e-09,69;UBERON:0003081,1.48e-07,87;UBERON:0003929,4.73e-07,55;UBERON:0004921,6.04e-07,114;UBERON:0002530,7.62e-07,65;UBERON:0001007,9.01e-07,116;UBERON:0001555,9.01e-07,116;UBERON:0007026,9.01e-07,116 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0.171217968225505,0.239316476986009,0.856003649656029,0.437102012094987,0,0,0,0.473193248037357,0.411343300817216,0,0.0850432901510698,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,12.1700805314171,0.445326417194474,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0.884610551949874,0.485300549842228,1.76673214768315,0.484875253135222,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0,0.219550115291051,0,0,0.205809224758569,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0,0,0.648540907100142,0,4.31304619582064,0,0.312037673114561,0.252578877947112,0,0,1.10851914099963,0,0.162964976442026,0,0,0,0,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,1.14704320301017,1.55416483679306,0.723245292907558,1.50791283939272,3.80733978673097,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0.683483523191411,0,0.370389054739423,1.13021074202815,2.05041341581538,0.915112692826091,0.169978429993855,0.279902904647316,0.276399947608848,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0.404593039154462,0.0826534557253359,0,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0.352071715937262,0,0,0,0,1.26404448251271,0,0.205421914329655,0.77952493786677,0.716106782669926,1.98681354781265,2.28371354087941,2.51072196196781,3.83672509802961,3.81034033274999,4.03304740547362,2.63136277997332,3.46362629905186,4.67507608726276,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0,0,0,0,1.02860775715625,0,0,0,0,0,0.365855945745545,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p@chr4:130488215..130488226,+ | |||
}} |
Revision as of 03:56, 14 September 2013
Short description: | p@chr4:130488215..130488226, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:130488215..130488226, + |
Coexpression cluster: | MCL_coexpression_mm9:2120 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 9.43e-09 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.