FFCP PHASE1:Hg19::chr9:127023762..127023769,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10783|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7749|TSSclassifier=S|UniProt=Q5TBG1,Q5TBH1|association_with_transcript=10bp_to_ENST00000373596,ENST00000425237_5end|description=CAGE_peak_14_at_NEK6_5end|id=chr9:127023762..127023769,+|ontology_enrichment_celltype=CL:0000839!2.26e-22!70;CL:0000557!4.52e-22!71;CL:0002057!8.60e-20!42;CL:0002009!1.66e-19!65;CL:0002194!5.66e-19!63;CL:0000576!5.66e-19!63;CL:0000040!5.66e-19!63;CL:0000559!5.66e-19!63;CL:0000766!1.78e-18!76;CL:0000860!6.80e-18!45;CL:0000763!2.38e-11!112;CL:0000049!2.38e-11!112;CL:0002031!3.39e-09!124;CL:0000144!2.92e-07!625;CL:0000738!5.06e-07!140|ontology_enrichment_celltype_v019=CL:0000473;4.78e-17;39!CL:0000234;4.78e-17;39!CL:0000235;4.11e-14;6!CL:0000860;3.73e-11;33!CL:0002057;3.73e-11;33|ontology_enrichment_celltype_v019_2=CL:0000473,2.23e-17,48;CL:0000234,2.23e-17,48;CL:0000235,2.62e-14,6;CL:0002194,1.31e-13,59;CL:0000576,1.31e-13,59;CL:0000040,1.31e-13,59;CL:0000559,1.31e-13,59;CL:0002009,4.03e-13,61;CL:0000839,4.96e-12,66;CL:0000557,7.85e-12,67;CL:0000766,6.42e-11,72;CL:0000860,7.56e-10,42;CL:0002057,7.56e-10,42;CL:0000763,8.12e-07,108;CL:0000049,8.12e-07,108|ontology_enrichment_development_v019=UBERON:0000358;8.12e-11;1!CL:0002057;1.13e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.15e-23!80;UBERON:0002405!4.13e-21!115;UBERON:0001474!4.42e-21!86;UBERON:0004765!3.88e-18!101;UBERON:0001434!3.88e-18!101;UBERON:0002390!7.60e-17!102;UBERON:0003061!7.60e-17!102;UBERON:0002193!8.35e-16!112;UBERON:0002204!1.59e-14!167;UBERON:0003081!8.73e-11!216|ontology_enrichment_uberon_v019=UBERON:0007195;2.28e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.68e-15,76;UBERON:0001474,1.10e-13,82;UBERON:0004765,2.59e-12,90;UBERON:0002405,7.39e-12,93;UBERON:0002390,3.67e-11,98;UBERON:0003061,3.67e-11,98;UBERON:0001434,6.68e-11,100;UBERON:0007195,3.61e-10,1;UBERON:0002193,5.85e-10,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.581592955118259,2.26725566213286,0.727752183563449,0.929716147622738,2.05583944010913,0.309706370895104,0.863077176966451,0.256160706529101,0.47296445977717,0,0,0,0.376484679085209,0.272906150057846,1.12361742222542,0.918251677112708,0.641858054152187,1.91801137739712,0.989553900560148,0.797854630486527,0.426224750532694,0.580418477257168,0.56738522469114,0,1.25624332628372,1.0429658368404,0.868755378820466,0,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,0,1.45990461090791,0.0945348171640679,0.221729397462564,0.351339142772504,0.0654895377488563,0,0,0.97364218096405,0.348259474598534,0.531831842075461,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0,1.24484414159907,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0.226864366320042,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0,1.63802985597466,1.78357394746474,0,0,0,0,0,0,0,0.264145302039678,0.414656231081544,0.144119953416961,0.37872730027914,0.126995788584338,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.199945982364114,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0.356857977594324,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0,2.56450125116389,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0.767693373934002,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,0,2.76125442755818,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10783 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7749 | |||
|TSSclassifier=S | |||
|UniProt=Q5TBG1,Q5TBH1 | |||
|association_with_transcript=10bp_to_ENST00000373596,ENST00000425237_5end | |||
|description=CAGE_peak_14_at_NEK6_5end | |||
|id=chr9:127023762..127023769,+ | |||
|ontology_enrichment_celltype=CL:0000839!2.26e-22!70;CL:0000557!4.52e-22!71;CL:0002057!8.60e-20!42;CL:0002009!1.66e-19!65;CL:0002194!5.66e-19!63;CL:0000576!5.66e-19!63;CL:0000040!5.66e-19!63;CL:0000559!5.66e-19!63;CL:0000766!1.78e-18!76;CL:0000860!6.80e-18!45;CL:0000763!2.38e-11!112;CL:0000049!2.38e-11!112;CL:0002031!3.39e-09!124;CL:0000144!2.92e-07!625;CL:0000738!5.06e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.78e-17;39!CL:0000234;4.78e-17;39!CL:0000235;4.11e-14;6!CL:0000860;3.73e-11;33!CL:0002057;3.73e-11;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.23e-17,48;CL:0000234,2.23e-17,48;CL:0000235,2.62e-14,6;CL:0002194,1.31e-13,59;CL:0000576,1.31e-13,59;CL:0000040,1.31e-13,59;CL:0000559,1.31e-13,59;CL:0002009,4.03e-13,61;CL:0000839,4.96e-12,66;CL:0000557,7.85e-12,67;CL:0000766,6.42e-11,72;CL:0000860,7.56e-10,42;CL:0002057,7.56e-10,42;CL:0000763,8.12e-07,108;CL:0000049,8.12e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.12e-11;1!CL:0002057;1.13e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.15e-23!80;UBERON:0002405!4.13e-21!115;UBERON:0001474!4.42e-21!86;UBERON:0004765!3.88e-18!101;UBERON:0001434!3.88e-18!101;UBERON:0002390!7.60e-17!102;UBERON:0003061!7.60e-17!102;UBERON:0002193!8.35e-16!112;UBERON:0002204!1.59e-14!167;UBERON:0003081!8.73e-11!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.28e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.68e-15,76;UBERON:0001474,1.10e-13,82;UBERON:0004765,2.59e-12,90;UBERON:0002405,7.39e-12,93;UBERON:0002390,3.67e-11,98;UBERON:0003061,3.67e-11,98;UBERON:0001434,6.68e-11,100;UBERON:0007195,3.61e-10,1;UBERON:0002193,5.85e-10,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.581592955118259,2.26725566213286,0.727752183563449,0.929716147622738,2.05583944010913,0.309706370895104,0.863077176966451,0.256160706529101,0.47296445977717,0,0,0,0.376484679085209,0.272906150057846,1.12361742222542,0.918251677112708,0.641858054152187,1.91801137739712,0.989553900560148,0.797854630486527,0.426224750532694,0.580418477257168,0.56738522469114,0,1.25624332628372,1.0429658368404,0.868755378820466,0,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,0,1.45990461090791,0.0945348171640679,0.221729397462564,0.351339142772504,0.0654895377488563,0,0,0.97364218096405,0.348259474598534,0.531831842075461,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0,1.24484414159907,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0.226864366320042,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0,1.63802985597466,1.78357394746474,0,0,0,0,0,0,0,0.264145302039678,0.414656231081544,0.144119953416961,0.37872730027914,0.126995788584338,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.199945982364114,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0.356857977594324,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0,2.56450125116389,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0.767693373934002,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,0,2.76125442755818,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,1.0062716070103,0,0,0.756154618816195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.643324774124777,0,0,0.463044948647668,0,0.179088841081487,0.308801447160972,0,0,0,0.168942440653073,0,0,1.21543982470953,0,0,0,0.327130788511688,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0.431855182437243,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785201868921944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0.320568492303233 | |||
|short_description=p14@NEK6 | |||
}} |
Revision as of 07:23, 14 September 2013
Short description: | p14@NEK6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_NEK6_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000373596, ENST00000425237_5end |
EntrezGene: | NEK6 |
HGNC: | 7749 |
UniProt: | Q5TBG1Q5TBH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.23e-17 | 48 |
phagocyte | 2.23e-17 | 48 |
macrophage | 2.62e-14 | 6 |
monopoietic cell | 1.31e-13 | 59 |
monocyte | 1.31e-13 | 59 |
monoblast | 1.31e-13 | 59 |
promonocyte | 1.31e-13 | 59 |
macrophage dendritic cell progenitor | 4.03e-13 | 61 |
myeloid lineage restricted progenitor cell | 4.96e-12 | 66 |
granulocyte monocyte progenitor cell | 7.85e-12 | 67 |
myeloid leukocyte | 6.42e-11 | 72 |
classical monocyte | 7.56e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.56e-10 | 42 |
myeloid cell | 8.12e-07 | 108 |
common myeloid progenitor | 8.12e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.68e-15 | 76 |
bone element | 1.10e-13 | 82 |
skeletal element | 2.59e-12 | 90 |
immune system | 7.39e-12 | 93 |
hematopoietic system | 3.67e-11 | 98 |
blood island | 3.67e-11 | 98 |
skeletal system | 6.68e-11 | 100 |
stroma of bone marrow | 3.61e-10 | 1 |
hemolymphoid system | 5.85e-10 | 108 |
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