FFCP PHASE1:Mm9::chr5:66254802..66254889,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74734|HGNC=|MCL_coexpression_id=123|UniProt=Q9D3G9,Q504M6|association_with_transcript=0bp_to_ENSMUST00000031106,NM_001081105,uc008xoe.1_5end|description=CAGE_peak_1_at_Rhoh_5end|id=chr5:66254802..66254889,+|ontology_enrichment_celltype=CL:0000988!2.72e-10!32;CL:0002032!2.72e-10!32;CL:0000037!2.72e-10!32;CL:0000566!2.72e-10!32;CL:0000837!2.72e-10!32;CL:0000838!8.05e-09!12;CL:0002031!3.16e-08!25;CL:0000084!3.31e-08!11;CL:0000827!3.31e-08!11;CL:0000542!9.79e-08!13;CL:0000051!9.79e-08!13;CL:0000738!1.46e-07!17;CL:0002087!1.46e-07!17;CL:0000791!4.54e-07!9;CL:0000789!4.54e-07!9;CL:0002420!4.54e-07!9;CL:0002419!4.54e-07!9;CL:0000790!4.54e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,3.55e-12,32;CL:0002032,3.55e-12,32;CL:0000037,3.55e-12,32;CL:0000837,3.55e-12,32;CL:0002031,6.78e-10,25;CL:0000838,1.07e-09,12;CL:0000084,5.23e-09,11;CL:0000827,5.23e-09,11;CL:0000542,1.97e-08,13;CL:0000051,1.97e-08,13;CL:0000738,3.04e-08,17;CL:0002087,3.04e-08,17;CL:0000791,9.80e-08,9;CL:0000789,9.80e-08,9;CL:0002420,9.80e-08,9;CL:0002419,9.80e-08,9;CL:0000790,9.80e-08,9;CL:0002320,1.45e-07,46;CL:0000134,1.45e-07,46;CL:0000624,5.32e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.53e-19!48;UBERON:0002390!7.49e-18!45;UBERON:0003061!7.49e-18!45;UBERON:0002405!9.91e-17!70;UBERON:0004177!6.41e-12!29;UBERON:0003408!9.47e-10!24;UBERON:0003081!1.37e-09!88;UBERON:0005057!1.38e-09!51;UBERON:0002370!1.98e-09!23;UBERON:0000974!1.98e-09!23;UBERON:0004807!1.98e-09!23;UBERON:0005058!1.98e-09!23;UBERON:0003351!1.98e-09!23;UBERON:0009113!1.98e-09!23;UBERON:0003295!1.98e-09!23;UBERON:0009722!1.98e-09!23;UBERON:0005562!1.98e-09!23;UBERON:0007690!1.98e-09!23;UBERON:0006562!1.08e-08!24;UBERON:0001557!1.08e-08!24;UBERON:0001042!1.08e-08!24;UBERON:0008814!1.08e-08!24;UBERON:0009145!1.08e-08!24;UBERON:0002371!8.88e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.71e-22,48;UBERON:0002405,1.71e-22,48;UBERON:0002390,7.89e-21,45;UBERON:0003061,7.89e-21,45;UBERON:0004177,3.68e-14,29;UBERON:0005057,3.68e-14,29;UBERON:0003408,1.05e-11,24;UBERON:0002370,2.38e-11,23;UBERON:0000974,2.38e-11,23;UBERON:0004807,2.38e-11,23;UBERON:0005058,2.38e-11,23;UBERON:0003351,2.38e-11,23;UBERON:0009113,2.38e-11,23;UBERON:0003295,2.38e-11,23;UBERON:0009722,2.38e-11,23;UBERON:0005562,2.38e-11,23;UBERON:0007690,2.38e-11,23;UBERON:0003081,4.94e-11,87;UBERON:0000077,1.33e-10,35;UBERON:0006562,2.05e-10,24;UBERON:0001557,2.05e-10,24;UBERON:0001042,2.05e-10,24;UBERON:0008814,2.05e-10,24;UBERON:0009145,2.05e-10,24;UBERON:0001004,2.74e-08,42;UBERON:0000072,4.32e-08,27;UBERON:0000065,5.91e-08,41;UBERON:0002384,1.45e-07,46;UBERON:0001041,2.00e-07,80;UBERON:0002371,2.07e-07,16;UBERON:0001474,2.57e-07,22;UBERON:0004765,2.57e-07,22;UBERON:0001434,2.57e-07,22;UBERON:0000926,4.26e-07,120;UBERON:0004120,4.26e-07,120;UBERON:0006603,4.26e-07,120|phase1_expression=0,0,0,0,0,0,0,305.634906586211,65.88912196698,84.0291649495957,70.0281490042315,54.8832453887915,212.288905114695,199.493358320152,18.3210368998615,34.2183201888806,13.2916756844348,156.311502935007,152.059906868764,157.024171165271,6.88850650223665,88.3689465687879,93.2483247225999,10.8794847499517,14.2233754261645,0,0,0,2.66032787238923,3.52842181663903,2.21730510655305,0,0,0,0,0,0,25.1118978442145,17.9707129240474,29.8408534065065,42.352667138233,32.7861832780054,36.8987868303677,0,0,0,0,0,0,0,0,0,139.259563027921,168.284016946632,158.972366994385,0.257259436035947,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0,0,13.9484456178617,18.7884608887725,8.5257613793532,4.19440154725767,1.15265491596466,0.311068836925433,0.270011876663381,0.210324961351382,1.14260393761521,0.441737081903227,0,0.0958454710182364,0,1.10115880999389,0.766124028511126,0.614426133024974,0,0.274462930807229,1.56274011167028,0,1.12552522006336,1.37518422999129,0.294628585473668,0.427115042397309,0.186399445825301,1.13589289999776,0.0755715601067855,0.869593466105033,4.30211938490693,0,0.539703191637817,0,0,10.6737759300131,0,0,0,0.14084341977668,0,0,0,0,0,0,8.79215873836762,116.522047641227,2.67195850316685,1.04091196059682,1.21786191324856,0.691846491768175,0.150722640552623,0.940709657085638,0.251333182659351,0,1.87979163995885,14.153768831198,3.72063754879041,15.2380647737672,15.5160081003271,1.86391761218122,0,0,4.59822699375465,38.4606549664004,47.9922184794726,35.1984528992389,0.299581278809645,1.37250180845588,0,0.869121600961382,0.767146371990992,0.83115217823824,0.648965052271031,1.2220723662038,16.9193480029727,0.505445516867349,0.631325567659422,0.520481771850815,0.689706313300419,0.180062129805349,0.452114453507145,0.204109497453984,0.2562274405697,0.468508622798644,0,0,0.189106080167819,0.351902248327898,1.09597866213787,1.66828349535359,1.39300866608867,2.05782136407943,0.59710280045548,26.6841011179029,21.3598762905214,19.3231179589003,0,0.469052119962192,0.720248245844059,0,1.37734962223183,0.462801338662135,1.16266972375204,0,1.05088808130453,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| ||
|EntrezGene=74734 | |||
|HGNC= | |||
|MCL_coexpression_id=123 | |||
|UniProt=Q9D3G9,Q504M6 | |||
|association_with_transcript=0bp_to_ENSMUST00000031106,NM_001081105,uc008xoe.1_5end | |||
|description=CAGE_peak_1_at_Rhoh_5end | |||
|id=chr5:66254802..66254889,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.72e-10!32;CL:0002032!2.72e-10!32;CL:0000037!2.72e-10!32;CL:0000566!2.72e-10!32;CL:0000837!2.72e-10!32;CL:0000838!8.05e-09!12;CL:0002031!3.16e-08!25;CL:0000084!3.31e-08!11;CL:0000827!3.31e-08!11;CL:0000542!9.79e-08!13;CL:0000051!9.79e-08!13;CL:0000738!1.46e-07!17;CL:0002087!1.46e-07!17;CL:0000791!4.54e-07!9;CL:0000789!4.54e-07!9;CL:0002420!4.54e-07!9;CL:0002419!4.54e-07!9;CL:0000790!4.54e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.55e-12,32;CL:0002032,3.55e-12,32;CL:0000037,3.55e-12,32;CL:0000837,3.55e-12,32;CL:0002031,6.78e-10,25;CL:0000838,1.07e-09,12;CL:0000084,5.23e-09,11;CL:0000827,5.23e-09,11;CL:0000542,1.97e-08,13;CL:0000051,1.97e-08,13;CL:0000738,3.04e-08,17;CL:0002087,3.04e-08,17;CL:0000791,9.80e-08,9;CL:0000789,9.80e-08,9;CL:0002420,9.80e-08,9;CL:0002419,9.80e-08,9;CL:0000790,9.80e-08,9;CL:0002320,1.45e-07,46;CL:0000134,1.45e-07,46;CL:0000624,5.32e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.53e-19!48;UBERON:0002390!7.49e-18!45;UBERON:0003061!7.49e-18!45;UBERON:0002405!9.91e-17!70;UBERON:0004177!6.41e-12!29;UBERON:0003408!9.47e-10!24;UBERON:0003081!1.37e-09!88;UBERON:0005057!1.38e-09!51;UBERON:0002370!1.98e-09!23;UBERON:0000974!1.98e-09!23;UBERON:0004807!1.98e-09!23;UBERON:0005058!1.98e-09!23;UBERON:0003351!1.98e-09!23;UBERON:0009113!1.98e-09!23;UBERON:0003295!1.98e-09!23;UBERON:0009722!1.98e-09!23;UBERON:0005562!1.98e-09!23;UBERON:0007690!1.98e-09!23;UBERON:0006562!1.08e-08!24;UBERON:0001557!1.08e-08!24;UBERON:0001042!1.08e-08!24;UBERON:0008814!1.08e-08!24;UBERON:0009145!1.08e-08!24;UBERON:0002371!8.88e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.71e-22,48;UBERON:0002405,1.71e-22,48;UBERON:0002390,7.89e-21,45;UBERON:0003061,7.89e-21,45;UBERON:0004177,3.68e-14,29;UBERON:0005057,3.68e-14,29;UBERON:0003408,1.05e-11,24;UBERON:0002370,2.38e-11,23;UBERON:0000974,2.38e-11,23;UBERON:0004807,2.38e-11,23;UBERON:0005058,2.38e-11,23;UBERON:0003351,2.38e-11,23;UBERON:0009113,2.38e-11,23;UBERON:0003295,2.38e-11,23;UBERON:0009722,2.38e-11,23;UBERON:0005562,2.38e-11,23;UBERON:0007690,2.38e-11,23;UBERON:0003081,4.94e-11,87;UBERON:0000077,1.33e-10,35;UBERON:0006562,2.05e-10,24;UBERON:0001557,2.05e-10,24;UBERON:0001042,2.05e-10,24;UBERON:0008814,2.05e-10,24;UBERON:0009145,2.05e-10,24;UBERON:0001004,2.74e-08,42;UBERON:0000072,4.32e-08,27;UBERON:0000065,5.91e-08,41;UBERON:0002384,1.45e-07,46;UBERON:0001041,2.00e-07,80;UBERON:0002371,2.07e-07,16;UBERON:0001474,2.57e-07,22;UBERON:0004765,2.57e-07,22;UBERON:0001434,2.57e-07,22;UBERON:0000926,4.26e-07,120;UBERON:0004120,4.26e-07,120;UBERON:0006603,4.26e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,305.634906586211,65.88912196698,84.0291649495957,70.0281490042315,54.8832453887915,212.288905114695,199.493358320152,18.3210368998615,34.2183201888806,13.2916756844348,156.311502935007,152.059906868764,157.024171165271,6.88850650223665,88.3689465687879,93.2483247225999,10.8794847499517,14.2233754261645,0,0,0,2.66032787238923,3.52842181663903,2.21730510655305,0,0,0,0,0,0,25.1118978442145,17.9707129240474,29.8408534065065,42.352667138233,32.7861832780054,36.8987868303677,0,0,0,0,0,0,0,0,0,139.259563027921,168.284016946632,158.972366994385,0.257259436035947,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0,0,13.9484456178617,18.7884608887725,8.5257613793532,4.19440154725767,1.15265491596466,0.311068836925433,0.270011876663381,0.210324961351382,1.14260393761521,0.441737081903227,0,0.0958454710182364,0,1.10115880999389,0.766124028511126,0.614426133024974,0,0.274462930807229,1.56274011167028,0,1.12552522006336,1.37518422999129,0.294628585473668,0.427115042397309,0.186399445825301,1.13589289999776,0.0755715601067855,0.869593466105033,4.30211938490693,0,0.539703191637817,0,0,10.6737759300131,0,0,0,0.14084341977668,0,0,0,0,0,0,8.79215873836762,116.522047641227,2.67195850316685,1.04091196059682,1.21786191324856,0.691846491768175,0.150722640552623,0.940709657085638,0.251333182659351,0,1.87979163995885,14.153768831198,3.72063754879041,15.2380647737672,15.5160081003271,1.86391761218122,0,0,4.59822699375465,38.4606549664004,47.9922184794726,35.1984528992389,0.299581278809645,1.37250180845588,0,0.869121600961382,0.767146371990992,0.83115217823824,0.648965052271031,1.2220723662038,16.9193480029727,0.505445516867349,0.631325567659422,0.520481771850815,0.689706313300419,0.180062129805349,0.452114453507145,0.204109497453984,0.2562274405697,0.468508622798644,0,0,0.189106080167819,0.351902248327898,1.09597866213787,1.66828349535359,1.39300866608867,2.05782136407943,0.59710280045548,26.6841011179029,21.3598762905214,19.3231179589003,0,0.469052119962192,0.720248245844059,0,1.37734962223183,0.462801338662135,1.16266972375204,0,1.05088808130453,0.493679549740441,1.80584210487005,1.29710095273369,2.63159977365598,2.19550115291051,2.54992195644706,0.210289948564127,0.205809224758569,6.93879444265976,1.05780226665418,0.213288250535234,0.232236671860439,1.15980715189884,1.00841762311671,0.444756087689741,0.951128130562796,4.2707615539006,0.988193728344065,1.50801125280162,0.994782360205754,1.75467678407208,4.49409704327111,3.02593269824572,2.19055400579804,0.569003702859245,0.685491075658373,1.1270773567308,0,0.387904974335251,0.140271639780637,0.442655759869801,0.147610147979602,0.784993639206874,0.370191491765402,0.889357881261447,1.66845105716094,0.982794975566015,2.02375901146368,1.42002084971952,2.41177159752417,3.56476192493988,4.89083433666378,7.62035565842666,6.31491250332587,4.31304619582064,4.09355042435354,4.36852742360385,2.27320990152401,0.896987067609561,0,12.7479701214957,0.947457058852424,0,0.169745085775188,1.17345124144251,4.02015017860358,0.238043640886014,1.17080188714679,1.7339865851681,2.87904096543407,4.46473352240964,13.6006551214063,10.0157289482219,8.38964539772767,4.52373851817817,1.08781136763742,5.4094070032094,5.51873492609465,0.321101179975584,1.05490517932983,0,2.27223834483936,0,0,0,0,0,0,0,0,0,0.963963949265421,1.13552068166615,1.6025904330053,1.30309567482861,0.989820737835213,3.98235415019888,0.728341908464944,0.906970670894253,0.754420319023592,0.590603785761546,0.614870295887855,1.03371317267288,1.09060118843252,2.13898427030833,5.68866164284469,1.05418608574999,2.06271086496374,0.340439605753788,0.36012218806262,0.388076051348264,0.643011105094777,0.177340233642274,0.178368817602071,0.822745103010605,0.608929898229199,0.23467170806371,0.21183207086382,0.661585194164886,0.8244312647074,1.29171541356724,0.784068024066026,0.596861720015682,0.492422699235184,3.49777003955821,0.556275906031529,35.5411432059534,5.15967169908056,9.25972636848558,17.8950034154456,35.6771934351876,33.6303914613588,43.0045427884454,55.2808236678449,45.329591407851,0,0.158167996790568,0.203319467126849,0.756037385752609,0.209088296014469,1.09181281873089,0.944050424693745,1.48776220305605,1.04702376793612,2.07383957266869,8.07741107013003,0,0.149516546043979,0.330916980914195,0.388902376688095,1.93739735216597,1.01373675294467,0.821500670520278,0.2604087696879,0.209718688851422,0,0,151.369326780897,25.3406519112705,35.4352802218654,65.2202531348531,76.4443990500146,105.30111803407,110.099031760291,124.797650462518,150.944842672481,117.51089586201,168.581381548797,154.860572495467,177.99190703461,193.898780719223,0.226730383615211,0,0,0,1.15913756419314,2.064507229963,1.28206136987086,1.50057865355346,2.00628841614145,1.12950368523413,1.38097570952153,3.43737308063638,0.171853182343688,0,0.755393897389701,1.35004500046361,0.900642406448441,0.906284817968409,0,0,0,0.682934423016537,1.45864030240976,1.46729213839588,1.2869045591501,1.11123363900808,2.06035057238894,2.56735367673452,1.5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| |||
|short_description=p1@Rhoh | |||
}} |
Revision as of 07:52, 14 September 2013
Short description: | p1@Rhoh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rhoh_5end |
Coexpression cluster: | MCL_coexpression_mm9:123 |
Association with transcript: | 0bp_to_ENSMUST00000031106, NM_001081105, uc008xoe.1_5end |
EntrezGene: | Rhoh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.