FFCP PHASE1:Mm9::chr6:68880751..68880775,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=192|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:68880751..68880775,-|id=chr6:68880751..68880775,-|ontology_enrichment_celltype=CL:0000553!6.74e-10!6;CL:0000556!6.74e-10!6|ontology_enrichment_celltype_v019_2=CL:0000553,1.42e-23,6;CL:0000556,1.42e-23,6;CL:0000050,1.03e-15,9;CL:0000839,7.47e-11,13;CL:0000763,8.55e-09,16;CL:0002027,3.05e-08,3;CL:0002006,3.05e-08,3;CL:0002024,3.05e-08,3;CL:0002031,8.26e-08,25;CL:0000049,2.21e-07,19;CL:0000945,5.34e-07,1;CL:0000236,5.34e-07,1;CL:0000826,5.34e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.91e-09!51;UBERON:0002465!7.28e-08!3;UBERON:0002193!5.16e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.06e-17,3;UBERON:0002193,9.13e-13,48;UBERON:0002405,9.13e-13,48;UBERON:0001962,4.37e-12,2;UBERON:0001961,4.37e-12,2;UBERON:0001744,4.37e-12,2;UBERON:0001155,6.40e-12,2;UBERON:0000059,6.40e-12,2;UBERON:0002106,8.42e-09,6;UBERON:0004457,8.42e-09,6;UBERON:0000042,8.42e-09,6;UBERON:0004854,8.42e-09,6;UBERON:0009034,8.42e-09,6;UBERON:0002095,8.42e-09,6;UBERON:0004782,8.42e-09,6;UBERON:0003281,8.42e-09,6;UBERON:0009664,8.42e-09,6;UBERON:0002296,8.42e-09,6;UBERON:0005602,8.42e-09,6;UBERON:0001179,8.42e-09,6;UBERON:0006293,8.42e-09,6;UBERON:0002371,8.55e-09,16;UBERON:0000029,2.75e-07,1;UBERON:0001097,2.75e-07,1;UBERON:0003968,2.75e-07,1;UBERON:0001467,2.75e-07,1;UBERON:0002390,4.26e-07,45;UBERON:0003061,4.26e-07,45;UBERON:0003199,6.09e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33042690360362,6.88415909125408,0,13.4071420277251,12.7516423253337,13.580468857537,0.17008658030214,0,0,4.47978783821539,8.25873411841812,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,40.3943098489588,0.29688427812965,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0,0,3.72783522436244,0,0,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.528901133327089,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,2.03228509183265,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.6363382323899,0,0,0.565105371014073,1.0935538217682,2.28778173206523,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0,0,0,0.192423683280659,0.116876902181569,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:68880751..68880775,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=192 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:68880751..68880775,- | |||
|id=chr6:68880751..68880775,- | |||
|ontology_enrichment_celltype=CL:0000553!6.74e-10!6;CL:0000556!6.74e-10!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.42e-23,6;CL:0000556,1.42e-23,6;CL:0000050,1.03e-15,9;CL:0000839,7.47e-11,13;CL:0000763,8.55e-09,16;CL:0002027,3.05e-08,3;CL:0002006,3.05e-08,3;CL:0002024,3.05e-08,3;CL:0002031,8.26e-08,25;CL:0000049,2.21e-07,19;CL:0000945,5.34e-07,1;CL:0000236,5.34e-07,1;CL:0000826,5.34e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.91e-09!51;UBERON:0002465!7.28e-08!3;UBERON:0002193!5.16e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.06e-17,3;UBERON:0002193,9.13e-13,48;UBERON:0002405,9.13e-13,48;UBERON:0001962,4.37e-12,2;UBERON:0001961,4.37e-12,2;UBERON:0001744,4.37e-12,2;UBERON:0001155,6.40e-12,2;UBERON:0000059,6.40e-12,2;UBERON:0002106,8.42e-09,6;UBERON:0004457,8.42e-09,6;UBERON:0000042,8.42e-09,6;UBERON:0004854,8.42e-09,6;UBERON:0009034,8.42e-09,6;UBERON:0002095,8.42e-09,6;UBERON:0004782,8.42e-09,6;UBERON:0003281,8.42e-09,6;UBERON:0009664,8.42e-09,6;UBERON:0002296,8.42e-09,6;UBERON:0005602,8.42e-09,6;UBERON:0001179,8.42e-09,6;UBERON:0006293,8.42e-09,6;UBERON:0002371,8.55e-09,16;UBERON:0000029,2.75e-07,1;UBERON:0001097,2.75e-07,1;UBERON:0003968,2.75e-07,1;UBERON:0001467,2.75e-07,1;UBERON:0002390,4.26e-07,45;UBERON:0003061,4.26e-07,45;UBERON:0003199,6.09e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33042690360362,6.88415909125408,0,13.4071420277251,12.7516423253337,13.580468857537,0.17008658030214,0,0,4.47978783821539,8.25873411841812,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,40.3943098489588,0.29688427812965,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0,0,3.72783522436244,0,0,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.528901133327089,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,2.03228509183265,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.6363382323899,0,0,0.565105371014073,1.0935538217682,2.28778173206523,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0,0,0,0.192423683280659,0.116876902181569,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:68880751..68880775,- | |||
}} |
Revision as of 10:29, 14 September 2013
Short description: | p@chr6:68880751..68880775, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:68880751..68880775, - |
Coexpression cluster: | MCL_coexpression_mm9:192 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.42e-23 | 6 |
megakaryocyte | 1.42e-23 | 6 |
megakaryocyte-erythroid progenitor cell | 1.03e-15 | 9 |
myeloid lineage restricted progenitor cell | 7.47e-11 | 13 |
myeloid cell | 8.55e-09 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 3.05e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.05e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.05e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 8.26e-08 | 25 |
common myeloid progenitor | 2.21e-07 | 19 |
lymphocyte of B lineage | 5.34e-07 | 1 |
B cell | 5.34e-07 | 1 |
pro-B cell | 5.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.06e-17 | 3 |
hemolymphoid system | 9.13e-13 | 48 |
immune system | 9.13e-13 | 48 |
gut-associated lymphoid tissue | 4.37e-12 | 2 |
mucosa-associated lymphoid tissue | 4.37e-12 | 2 |
lymphoid tissue | 4.37e-12 | 2 |
colon | 6.40e-12 | 2 |
large intestine | 6.40e-12 | 2 |
spleen | 8.42e-09 | 6 |
cavity lining | 8.42e-09 | 6 |
serous membrane | 8.42e-09 | 6 |
gastrointestinal system mesentery | 8.42e-09 | 6 |
stomach region | 8.42e-09 | 6 |
mesentery | 8.42e-09 | 6 |
gastrointestinal system serosa | 8.42e-09 | 6 |
mesentery of stomach | 8.42e-09 | 6 |
gut mesentery | 8.42e-09 | 6 |
dorsal mesentery | 8.42e-09 | 6 |
dorsal mesogastrium | 8.42e-09 | 6 |
peritoneal cavity | 8.42e-09 | 6 |
spleen primordium | 8.42e-09 | 6 |
bone marrow | 8.55e-09 | 16 |
lymph node | 2.75e-07 | 1 |
axillary lymph node | 2.75e-07 | 1 |
peripheral lymph node | 2.75e-07 | 1 |
shoulder | 2.75e-07 | 1 |
hematopoietic system | 4.26e-07 | 45 |
blood island | 4.26e-07 | 45 |
egg chamber | 6.09e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.