FFCP PHASE1:Mm9::chr8:124866350..124866359,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:124866350..124866359,+|id=chr8:124866350..124866359,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,6.89e-08,3;CL:0000737,6.89e-08,3;CL:0000746,6.89e-08,3;CL:0000513,6.89e-08,3;CL:0000222,2.67e-07,7;CL:0000815,5.73e-07,1;CL:0000792,5.73e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!2.21e-08!33;UBERON:0003104!2.23e-08!131;UBERON:0009142!2.23e-08!131;UBERON:0000926!8.81e-08!193;UBERON:0004120!8.81e-08!193;UBERON:0006603!8.81e-08!193|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.25e-14,6;UBERON:0004457,7.25e-14,6;UBERON:0000042,7.25e-14,6;UBERON:0004854,7.25e-14,6;UBERON:0009034,7.25e-14,6;UBERON:0002095,7.25e-14,6;UBERON:0004782,7.25e-14,6;UBERON:0003281,7.25e-14,6;UBERON:0009664,7.25e-14,6;UBERON:0002296,7.25e-14,6;UBERON:0005602,7.25e-14,6;UBERON:0001179,7.25e-14,6;UBERON:0006293,7.25e-14,6;UBERON:0003887,6.47e-13,10;UBERON:0002075,1.88e-09,19;UBERON:0004872,3.84e-09,33;UBERON:0000945,5.17e-08,16;UBERON:0010039,5.17e-08,16;UBERON:0000998,7.38e-07,1;UBERON:0007194,7.38e-07,1;UBERON:0006868,7.38e-07,1|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.503637815735669,0.934450562382103,2.58246646883153,0.140788722151667,0.468129052643987,0,0.319088635981346,0.342401459862411,1.57356724354195,0.333109761815663,1.01237633694913,0,0,0,0,0.425216450755349,0,0.261199789138935,0.799962113967033,1.37645568640302,0,0,0.430942465371778,0.190023419456374,0,0,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0.336093799142464,0.514518872071894,1.14613375975503,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0.142371680799103,0.186399445825301,0.075726193333184,0.302286240427142,1.44932244350839,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0.41557608911912,0,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0,0,0,0.0680364991513279,0.2562274405697,0,0,0,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.720248245844059,0,0.196764231747404,1.3884040159864,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0,0,0,0.102904612379284,0.330418782983798,0.528901133327089,0,0.232236671860439,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.342745537829186,0,0,0.387904974335251,0.140271639780637,0.126473074248515,0.442830443938806,0.156998727841375,0,0.296452627087149,0,0.589676985339609,0.449724224769707,0.405720242777006,0.241177159752417,1.01850340712568,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0.345369963731791,0.289298117163023,0,0.54390568381871,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0.35613120733451,0,0,1.32745138339963,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0,0.632073515871632,2.10837217149998,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0,1.02522528478712,0.206386867963223,0.370389054739423,1.50694765603753,1.36694227721025,1.14389086603261,0,0,0,1.90934123603023,0.158167996790568,0,0.432021363287205,0.836353184057875,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0,0,0,0,0,0.632022241256357,0.810900861160657,0.410843828659309,0,0,0.39736270956253,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.38983152295901,0.673482891482306,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,2.00628841614145,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0,0,0,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0,0,0,0.231867835620421|short_description=p@chr8:124866350..124866359,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:124866350..124866359,+ | |||
|id=chr8:124866350..124866359,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,6.89e-08,3;CL:0000737,6.89e-08,3;CL:0000746,6.89e-08,3;CL:0000513,6.89e-08,3;CL:0000222,2.67e-07,7;CL:0000815,5.73e-07,1;CL:0000792,5.73e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.21e-08!33;UBERON:0003104!2.23e-08!131;UBERON:0009142!2.23e-08!131;UBERON:0000926!8.81e-08!193;UBERON:0004120!8.81e-08!193;UBERON:0006603!8.81e-08!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.25e-14,6;UBERON:0004457,7.25e-14,6;UBERON:0000042,7.25e-14,6;UBERON:0004854,7.25e-14,6;UBERON:0009034,7.25e-14,6;UBERON:0002095,7.25e-14,6;UBERON:0004782,7.25e-14,6;UBERON:0003281,7.25e-14,6;UBERON:0009664,7.25e-14,6;UBERON:0002296,7.25e-14,6;UBERON:0005602,7.25e-14,6;UBERON:0001179,7.25e-14,6;UBERON:0006293,7.25e-14,6;UBERON:0003887,6.47e-13,10;UBERON:0002075,1.88e-09,19;UBERON:0004872,3.84e-09,33;UBERON:0000945,5.17e-08,16;UBERON:0010039,5.17e-08,16;UBERON:0000998,7.38e-07,1;UBERON:0007194,7.38e-07,1;UBERON:0006868,7.38e-07,1 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.503637815735669,0.934450562382103,2.58246646883153,0.140788722151667,0.468129052643987,0,0.319088635981346,0.342401459862411,1.57356724354195,0.333109761815663,1.01237633694913,0,0,0,0,0.425216450755349,0,0.261199789138935,0.799962113967033,1.37645568640302,0,0,0.430942465371778,0.190023419456374,0,0,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0.336093799142464,0.514518872071894,1.14613375975503,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0.142371680799103,0.186399445825301,0.075726193333184,0.302286240427142,1.44932244350839,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0.41557608911912,0,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0,0,0,0.0680364991513279,0.2562274405697,0,0,0,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.720248245844059,0,0.196764231747404,1.3884040159864,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0,0,0,0.102904612379284,0.330418782983798,0.528901133327089,0,0.232236671860439,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.342745537829186,0,0,0.387904974335251,0.140271639780637,0.126473074248515,0.442830443938806,0.156998727841375,0,0.296452627087149,0,0.589676985339609,0.449724224769707,0.405720242777006,0.241177159752417,1.01850340712568,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0.345369963731791,0.289298117163023,0,0.54390568381871,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0.35613120733451,0,0,1.32745138339963,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0,0.632073515871632,2.10837217149998,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0,1.02522528478712,0.206386867963223,0.370389054739423,1.50694765603753,1.36694227721025,1.14389086603261,0,0,0,1.90934123603023,0.158167996790568,0,0.432021363287205,0.836353184057875,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0,0,0,0,0,0.632022241256357,0.810900861160657,0.410843828659309,0,0,0.39736270956253,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.38983152295901,0.673482891482306,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,2.00628841614145,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0,0,0,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0,0,0,0.231867835620421 | |||
|short_description=p@chr8:124866350..124866359,+ | |||
}} |
Revision as of 15:00, 14 September 2013
Short description: | p@chr8:124866350..124866359, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:124866350..124866359, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 6.89e-08 | 3 |
striated muscle cell | 6.89e-08 | 3 |
cardiac muscle cell | 6.89e-08 | 3 |
cardiac muscle myoblast | 6.89e-08 | 3 |
mesodermal cell | 2.67e-07 | 7 |
regulatory T cell | 5.73e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 7.25e-14 | 6 |
cavity lining | 7.25e-14 | 6 |
serous membrane | 7.25e-14 | 6 |
gastrointestinal system mesentery | 7.25e-14 | 6 |
stomach region | 7.25e-14 | 6 |
mesentery | 7.25e-14 | 6 |
gastrointestinal system serosa | 7.25e-14 | 6 |
mesentery of stomach | 7.25e-14 | 6 |
gut mesentery | 7.25e-14 | 6 |
dorsal mesentery | 7.25e-14 | 6 |
dorsal mesogastrium | 7.25e-14 | 6 |
peritoneal cavity | 7.25e-14 | 6 |
spleen primordium | 7.25e-14 | 6 |
intraembryonic coelom | 6.47e-13 | 10 |
viscus | 1.88e-09 | 19 |
splanchnic layer of lateral plate mesoderm | 3.84e-09 | 33 |
stomach | 5.17e-08 | 16 |
food storage organ | 5.17e-08 | 16 |
seminal vesicle | 7.38e-07 | 1 |
vesicular gland | 7.38e-07 | 1 |
seminal fluid secreting gland | 7.38e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.