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FFCP PHASE1:Mm9::chr8:94325847..94325869,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=16373|HGNC=|MCL_coexpression_id=1211|UniProt=P81067|association_with_transcript=-294bp_to_ENSMUST00000093312,NM_001253822,NM_008393_5end|description=CAGE_peak_3_at_Irx3_5end|id=chr8:94325847..94325869,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!5.51e-10!17;UBERON:0005181!5.51e-10!17;UBERON:0002224!5.51e-10!17;UBERON:0000915!5.51e-10!17;UBERON:0008947!5.51e-10!17;UBERON:0003258!5.51e-10!17;UBERON:0005153!1.70e-09!17;UBERON:0002048!8.78e-09!14;UBERON:0000117!8.78e-09!14;UBERON:0000171!8.78e-09!14;UBERON:0000170!8.78e-09!14;UBERON:0005597!8.78e-09!14;UBERON:0000118!8.78e-09!14;UBERON:0003103!4.62e-08!43;UBERON:0005157!7.90e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.29e-11,17;UBERON:0005181,1.29e-11,17;UBERON:0002224,1.29e-11,17;UBERON:0000915,1.29e-11,17;UBERON:0008947,1.29e-11,17;UBERON:0003258,1.29e-11,17;UBERON:0005153,1.66e-10,17;UBERON:0002048,3.49e-10,14;UBERON:0000117,3.49e-10,14;UBERON:0000171,3.49e-10,14;UBERON:0000170,3.49e-10,14;UBERON:0005597,3.49e-10,14;UBERON:0000118,3.49e-10,14;UBERON:0003103,6.08e-08,43;UBERON:0005157,6.92e-08,20;UBERON:0007100,1.89e-07,18;UBERON:0000948,1.89e-07,18;UBERON:0005498,1.89e-07,18;UBERON:0004140,1.89e-07,18;UBERON:0009881,1.89e-07,18;UBERON:0004141,1.89e-07,18;UBERON:0003084,1.89e-07,18;UBERON:0007005,1.89e-07,18;UBERON:0004139,1.89e-07,18;UBERON:0004291,1.89e-07,18|phase1_expression=10.4096750618116,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,1.56478268869608,0,0,1.1665793944457,2.2397827460058,5.75010257459886,0,0,0,0,0.286533439938757,0,9.91350658212029,7.40587370980846,8.23980824558033,0.338844532069132,0.889294796111139,0.899899717281399,0,0.7104801149461,1.49800055259202,0.768436610643109,0.103689612308478,0,0.210324961351382,0.856952953211411,1.54607978666129,0.122490799214954,0,0,2.20231761998777,0.893811366596314,1.84327839907492,2.37395317914349,2.47016637726506,2.08365348222704,1.95428099300967,0,1.98637722109853,1.17851434189467,0.711858403995515,1.67759501242771,0.227178579999552,0.377857800533928,0,0,0,0,0.649776417447669,0.896053774194671,0.421333260395256,1.36344258062446,1.29893002301434,1.41335829804136,7.74638808771743,0,2.54805239706646,0,2.16491041011214,4.05375784760158,6.0662933401774,0.34255163915718,1.29468941823586,0.148442139064825,1.04091196059682,0.608930956624282,1.38369298353635,1.05505848386836,0.823120949949934,1.13099932196708,1.48316980640624,0.433798070759735,0,0.970601099684455,0.441683036920787,1.45462575940567,1.86391761218122,0.878342391034642,0.83778682725382,0,0,0,0,1.79748767285787,0,0.125654352112864,0,0,0.41557608911912,1.46017136760982,0.101839363850316,0.870848794270651,0,4.62972082950243,10.2795149940536,3.90833577536904,3.42118046630164,1.65775299619287,1.42876648217788,1.92170580427275,0.937017245597288,1.29351685369508,1.07783996466421,3.21480336285293,2.28736461413134,2.41115305670332,2.78047249225598,5.2237824978325,7.40815691068596,1.39323986772945,0,0,0,3.72826390563903,5.39409937956521,3.6012412292203,4.02466050494857,2.95146347621106,3.70241070929708,3.48800917125612,2.95100741539581,3.73649095574942,6.08871444679878,5.08919138645195,5.26947262048062,6.57899943413995,5.04965265169416,5.77087600669599,0,0.205809224758569,0,0,0.639864751605702,0.696710015581316,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,2.0863469104839,2.39921876480431,2.25415471346161,3.05476991767971,3.49114476901726,1.82353131714828,1.39120381673366,2.80459281161244,3.45397201251025,1.72756029490521,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0.964887042726734,5.72734889516475,2.65287976478679,6.35563408123901,10.0149600607361,11.0304416695596,11.0554129911598,8.09348379012447,3.12213836572478,6.46304090835383,4.20782910332672,2.87018583583477,5.07976275618788,3.45369963731791,3.61622646453779,0,0,4.91764273019036,10.2096596132751,0.963303539926752,1.87538698547525,0.819674726883377,0.504941854408746,0.315508219416257,0.780877488593277,0,0,0.222798674082394,0,0,0,0,0,3.40656204499845,1.42452482933804,0.162886959353576,0.164970122972535,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0,2.70091641046965,0.646793418913773,1.07168517515796,0.709360934569094,1.07021290561242,1.31639216481697,1.2178597964584,3.28540391289194,4.66030555900404,0.441056796109924,8.244312647074,4.35953952078945,2.11095237248546,2.74556391207214,2.79039529566604,0,2.41052892613663,0,0.206386867963223,0,0,0,0,0,0,0,2.86401185404534,1.89801596148681,1.42323626988794,0.972048067396211,0.627264888043406,1.9652630737156,1.48350781023303,1.48776220305605,1.57053565190418,0,1.24267862617385,0,0.448549638131936,0.66183396182839,0,0.129159823477731,0.337912250981556,0.117357238645754,0,0.419437377702843,0,0,0,0.608175645870493,0.616265742988964,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0.288635524920988,0,0.680191150845634,6.65957860122194,16.776491185972,13.7665385418544,0.19318959403219,0.563047426353546,0,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,10.8976714963385,9.97562183502578,2.73173769206615,1.94485373654635,3.35381060204772,1.65459157605013,1.33348036680969,2.26638562962784,2.56735367673452,2.52697211763797,2.78827229879264,2.45214243801899,2.34103768674706,1.92075457214608,2.46972516509137,3.33405583898152,2.31768651889711,1.15745532278223,2.47251540481984,3.09117732282234,1.37147700954166,2.8396128985494,1.66905332963125,1.59881058295561,2.25862512996793,2.28459441307527,2.0122077016005,2.63069711437843,2.17286582153379,0.561142271657738,2.01679530811096,0.689531376628944,4.50154147486658,2.32405261778949,2.3148793317737,3.74715866906919,1.40358965067245,0.859484216193193,1.3390183244819,0.441182838239031,0.695603506861264|short_description=p3@Irx3}}
|EntrezGene=16373
|HGNC=
|MCL_coexpression_id=1211
|UniProt=P81067
|association_with_transcript=-294bp_to_ENSMUST00000093312,NM_001253822,NM_008393_5end
|description=CAGE_peak_3_at_Irx3_5end
|id=chr8:94325847..94325869,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005178!5.51e-10!17;UBERON:0005181!5.51e-10!17;UBERON:0002224!5.51e-10!17;UBERON:0000915!5.51e-10!17;UBERON:0008947!5.51e-10!17;UBERON:0003258!5.51e-10!17;UBERON:0005153!1.70e-09!17;UBERON:0002048!8.78e-09!14;UBERON:0000117!8.78e-09!14;UBERON:0000171!8.78e-09!14;UBERON:0000170!8.78e-09!14;UBERON:0005597!8.78e-09!14;UBERON:0000118!8.78e-09!14;UBERON:0003103!4.62e-08!43;UBERON:0005157!7.90e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.29e-11,17;UBERON:0005181,1.29e-11,17;UBERON:0002224,1.29e-11,17;UBERON:0000915,1.29e-11,17;UBERON:0008947,1.29e-11,17;UBERON:0003258,1.29e-11,17;UBERON:0005153,1.66e-10,17;UBERON:0002048,3.49e-10,14;UBERON:0000117,3.49e-10,14;UBERON:0000171,3.49e-10,14;UBERON:0000170,3.49e-10,14;UBERON:0005597,3.49e-10,14;UBERON:0000118,3.49e-10,14;UBERON:0003103,6.08e-08,43;UBERON:0005157,6.92e-08,20;UBERON:0007100,1.89e-07,18;UBERON:0000948,1.89e-07,18;UBERON:0005498,1.89e-07,18;UBERON:0004140,1.89e-07,18;UBERON:0009881,1.89e-07,18;UBERON:0004141,1.89e-07,18;UBERON:0003084,1.89e-07,18;UBERON:0007005,1.89e-07,18;UBERON:0004139,1.89e-07,18;UBERON:0004291,1.89e-07,18
|phase1_expression=10.4096750618116,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,1.56478268869608,0,0,1.1665793944457,2.2397827460058,5.75010257459886,0,0,0,0,0.286533439938757,0,9.91350658212029,7.40587370980846,8.23980824558033,0.338844532069132,0.889294796111139,0.899899717281399,0,0.7104801149461,1.49800055259202,0.768436610643109,0.103689612308478,0,0.210324961351382,0.856952953211411,1.54607978666129,0.122490799214954,0,0,2.20231761998777,0.893811366596314,1.84327839907492,2.37395317914349,2.47016637726506,2.08365348222704,1.95428099300967,0,1.98637722109853,1.17851434189467,0.711858403995515,1.67759501242771,0.227178579999552,0.377857800533928,0,0,0,0,0.649776417447669,0.896053774194671,0.421333260395256,1.36344258062446,1.29893002301434,1.41335829804136,7.74638808771743,0,2.54805239706646,0,2.16491041011214,4.05375784760158,6.0662933401774,0.34255163915718,1.29468941823586,0.148442139064825,1.04091196059682,0.608930956624282,1.38369298353635,1.05505848386836,0.823120949949934,1.13099932196708,1.48316980640624,0.433798070759735,0,0.970601099684455,0.441683036920787,1.45462575940567,1.86391761218122,0.878342391034642,0.83778682725382,0,0,0,0,1.79748767285787,0,0.125654352112864,0,0,0.41557608911912,1.46017136760982,0.101839363850316,0.870848794270651,0,4.62972082950243,10.2795149940536,3.90833577536904,3.42118046630164,1.65775299619287,1.42876648217788,1.92170580427275,0.937017245597288,1.29351685369508,1.07783996466421,3.21480336285293,2.28736461413134,2.41115305670332,2.78047249225598,5.2237824978325,7.40815691068596,1.39323986772945,0,0,0,3.72826390563903,5.39409937956521,3.6012412292203,4.02466050494857,2.95146347621106,3.70241070929708,3.48800917125612,2.95100741539581,3.73649095574942,6.08871444679878,5.08919138645195,5.26947262048062,6.57899943413995,5.04965265169416,5.77087600669599,0,0.205809224758569,0,0,0.639864751605702,0.696710015581316,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,2.0863469104839,2.39921876480431,2.25415471346161,3.05476991767971,3.49114476901726,1.82353131714828,1.39120381673366,2.80459281161244,3.45397201251025,1.72756029490521,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0.964887042726734,5.72734889516475,2.65287976478679,6.35563408123901,10.0149600607361,11.0304416695596,11.0554129911598,8.09348379012447,3.12213836572478,6.46304090835383,4.20782910332672,2.87018583583477,5.07976275618788,3.45369963731791,3.61622646453779,0,0,4.91764273019036,10.2096596132751,0.963303539926752,1.87538698547525,0.819674726883377,0.504941854408746,0.315508219416257,0.780877488593277,0,0,0.222798674082394,0,0,0,0,0,3.40656204499845,1.42452482933804,0.162886959353576,0.164970122972535,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0,2.70091641046965,0.646793418913773,1.07168517515796,0.709360934569094,1.07021290561242,1.31639216481697,1.2178597964584,3.28540391289194,4.66030555900404,0.441056796109924,8.244312647074,4.35953952078945,2.11095237248546,2.74556391207214,2.79039529566604,0,2.41052892613663,0,0.206386867963223,0,0,0,0,0,0,0,2.86401185404534,1.89801596148681,1.42323626988794,0.972048067396211,0.627264888043406,1.9652630737156,1.48350781023303,1.48776220305605,1.57053565190418,0,1.24267862617385,0,0.448549638131936,0.66183396182839,0,0.129159823477731,0.337912250981556,0.117357238645754,0,0.419437377702843,0,0,0,0.608175645870493,0.616265742988964,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0.288635524920988,0,0.680191150845634,6.65957860122194,16.776491185972,13.7665385418544,0.19318959403219,0.563047426353546,0,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,10.8976714963385,9.97562183502578,2.73173769206615,1.94485373654635,3.35381060204772,1.65459157605013,1.33348036680969,2.26638562962784,2.56735367673452,2.52697211763797,2.78827229879264,2.45214243801899,2.34103768674706,1.92075457214608,2.46972516509137,3.33405583898152,2.31768651889711,1.15745532278223,2.47251540481984,3.09117732282234,1.37147700954166,2.8396128985494,1.66905332963125,1.59881058295561,2.25862512996793,2.28459441307527,2.0122077016005,2.63069711437843,2.17286582153379,0.561142271657738,2.01679530811096,0.689531376628944,4.50154147486658,2.32405261778949,2.3148793317737,3.74715866906919,1.40358965067245,0.859484216193193,1.3390183244819,0.441182838239031,0.695603506861264
|short_description=p3@Irx3
}}

Revision as of 16:27, 14 September 2013

Short description:p3@Irx3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Irx3_5end
Coexpression cluster:MCL_coexpression_mm9:1211
Association with transcript: -294bp_to_ENSMUST00000093312, NM_001253822, NM_008393_5end
EntrezGene:Irx3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Irx3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.91
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.75
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C610.28
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B57.41
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E33.74
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G15.27
heart, neonate N20.CNhs11127.821-26I66.58
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D25.77
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G71.82
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B15.73
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F86.36
lung, embryo E15.CNhs11020.432-17C510.01
lung, embryo E16.CNhs10998.458-17B611.03
lung, embryo E17.CNhs10605.480-44A611.06
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E56.46
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A45.08
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H23.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H210.21
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C38.24
skin, neonate N00.CNhs11124.650-25G44.36
skin, neonate N03.CNhs11215.662-22H32.11
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F716.78
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G513.77
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I810.90
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thoracic cavity element1.29e-1117
thoracic segment organ1.29e-1117
thoracic cavity1.29e-1117
thoracic segment of trunk1.29e-1117
respiratory primordium1.29e-1117
endoderm of foregut1.29e-1117
epithelial bud1.66e-1017
lung3.49e-1014
respiratory tube3.49e-1014
respiration organ3.49e-1014
pair of lungs3.49e-1014
lung primordium3.49e-1014
lung bud3.49e-1014
compound organ6.08e-0843
epithelial fold6.92e-0820
primary circulatory organ1.89e-0718
heart1.89e-0718
primitive heart tube1.89e-0718
primary heart field1.89e-0718
anterior lateral plate mesoderm1.89e-0718
heart tube1.89e-0718
heart primordium1.89e-0718
cardiac mesoderm1.89e-0718
cardiogenic plate1.89e-0718
heart rudiment1.89e-0718







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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