FFCP PHASE1:Mm9::chrX:73160443..73160451,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=1417|UniProt=|association_with_transcript=-103bp_to_ENSMUST00000122186_5end|description=CAGE_peak_1_at_ENSMUST00000122186_5end|id=chrX:73160443..73160451,+|ontology_enrichment_celltype=CL:0000063!1.23e-13!66;CL:0000066!6.04e-10!25;CL:0002031!1.62e-08!25;CL:0000223!4.87e-08!20;CL:0000548!1.23e-07!115;CL:0000004!1.23e-07!115;CL:0000255!1.23e-07!115;CL:0000144!1.98e-07!121;CL:0000012!1.98e-07!121;CL:0000542!2.23e-07!13;CL:0000051!2.23e-07!13;CL:0000838!3.02e-07!12;CL:0000219!4.96e-07!54;CL:0000738!5.80e-07!17;CL:0002087!5.80e-07!17;CL:0002371!5.93e-07!118;CL:0000791!7.62e-07!9;CL:0000789!7.62e-07!9;CL:0002420!7.62e-07!9;CL:0002419!7.62e-07!9;CL:0000790!7.62e-07!9;CL:0002076!9.12e-07!15|ontology_enrichment_celltype_v019_2=CL:0002031,1.21e-16,25;CL:0002076,3.87e-14,15;CL:0002320,2.52e-13,46;CL:0000134,2.52e-13,46;CL:0000988,3.07e-12,32;CL:0002032,3.07e-12,32;CL:0000037,3.07e-12,32;CL:0000837,3.07e-12,32;CL:0000223,3.14e-12,20;CL:0000219,5.17e-12,54;CL:0000066,5.16e-11,25;CL:0000839,9.45e-10,13;CL:0002563,1.55e-09,9;CL:0002251,1.55e-09,9;CL:0000553,3.87e-09,6;CL:0000556,3.87e-09,6;CL:0000738,6.88e-09,17;CL:0002087,6.88e-09,17;CL:0000050,1.53e-08,9;CL:0000838,3.67e-08,12;CL:0002250,7.33e-08,3;CL:0000034,8.32e-08,97;CL:0000763,1.14e-07,16;CL:0000068,1.52e-07,3;CL:0002202,1.52e-07,3;CL:0000069,1.52e-07,3;CL:0002632,1.52e-07,3;CL:0002368,1.52e-07,3;CL:0000307,1.52e-07,3;CL:0000377,1.52e-07,3;CL:0000542,1.87e-07,13;CL:0000051,1.87e-07,13;CL:0000723,5.39e-07,91;CL:0000048,5.39e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.59e-08!15;UBERON:0001007!6.71e-07!128;UBERON:0001555!6.71e-07!128;UBERON:0007026!6.71e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.35e-15,15;UBERON:0002384,2.52e-13,46;UBERON:0001242,6.76e-11,13;UBERON:0001262,6.76e-11,13;UBERON:0004786,6.76e-11,13;UBERON:0003350,1.55e-09,9;UBERON:0004808,1.55e-09,9;UBERON:0001277,1.55e-09,9;UBERON:0004923,2.12e-08,24;UBERON:0000485,1.20e-07,11;UBERON:0003126,1.52e-07,3;UBERON:0001005,1.52e-07,3;UBERON:0007196,1.52e-07,3;UBERON:0001558,1.52e-07,3;UBERON:0000160,8.04e-07,31|phase1_expression=0.160148847104794,0.348975407639361,0,15.4256747766483,14.0250804384977,0.671517087647559,7.2419918584613,0.774739940649458,1.54867594366833,3.27690336850791,0.856089841127525,0.638177271962691,1.54080656938085,0.961624426608971,0,2.42970320867791,2.79824751251259,1.89277299214943,1.7824876368746,2.12194825899015,0.0850432901510698,0,2.08959831311148,11.8394392867121,10.782236210157,0.57423196411502,0.86152399231815,1.50829862880122,23.372880593134,1.26015064879965,0.221730510655305,3.81018404075779,0,0,2.59966457776147,3.82339684324532,3.26670970019791,0,0,0,0,0,0,0.251793635951155,0,0,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,5.36904339384756,2.90144856804538,1.00828139742739,0.514518872071894,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0.56276261003168,0,0,0,0,0.757261933331841,1.66257432234928,2.31891590961342,18.0689014166091,0.679971333707751,0.539703191637817,0.649776417447669,0,0.561777680527007,0,3.11743205523443,3.18005617059306,0.422530259330042,1.28326477414318,0,0,4.32982082022428,2.28023878927589,2.02209778005913,0.34255163915718,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0,0,0,0,0.213288250535234,0,0.38660238396628,0.605050573870028,1.11189021922435,0.951128130562796,0.474529061544512,1.81168850196412,1.00534083520108,0.596869416123452,0.779856348476481,0.898819408654221,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0,0.123397163921801,0.592905254174298,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.896987067609561,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0,0,0.390267295715598,0,0,0,0.163863314715738,0,0,1.50791283939272,2.17562273527484,0,0,0,0.234423373184406,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0.119372344003136,0.164140899745061,0.582961673259701,0,0,0,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0.474503990371703,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,0.226730383615211,1.10992976687032,0.448569283047378,1.51096154727671,0.19318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0,0,1.54667864109319,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.526139422875686,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0.220591419119515,0|short_description=p1@ENSMUST00000122186}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=1417 | |||
|UniProt= | |||
|association_with_transcript=-103bp_to_ENSMUST00000122186_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000122186_5end | |||
|id=chrX:73160443..73160451,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.23e-13!66;CL:0000066!6.04e-10!25;CL:0002031!1.62e-08!25;CL:0000223!4.87e-08!20;CL:0000548!1.23e-07!115;CL:0000004!1.23e-07!115;CL:0000255!1.23e-07!115;CL:0000144!1.98e-07!121;CL:0000012!1.98e-07!121;CL:0000542!2.23e-07!13;CL:0000051!2.23e-07!13;CL:0000838!3.02e-07!12;CL:0000219!4.96e-07!54;CL:0000738!5.80e-07!17;CL:0002087!5.80e-07!17;CL:0002371!5.93e-07!118;CL:0000791!7.62e-07!9;CL:0000789!7.62e-07!9;CL:0002420!7.62e-07!9;CL:0002419!7.62e-07!9;CL:0000790!7.62e-07!9;CL:0002076!9.12e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.21e-16,25;CL:0002076,3.87e-14,15;CL:0002320,2.52e-13,46;CL:0000134,2.52e-13,46;CL:0000988,3.07e-12,32;CL:0002032,3.07e-12,32;CL:0000037,3.07e-12,32;CL:0000837,3.07e-12,32;CL:0000223,3.14e-12,20;CL:0000219,5.17e-12,54;CL:0000066,5.16e-11,25;CL:0000839,9.45e-10,13;CL:0002563,1.55e-09,9;CL:0002251,1.55e-09,9;CL:0000553,3.87e-09,6;CL:0000556,3.87e-09,6;CL:0000738,6.88e-09,17;CL:0002087,6.88e-09,17;CL:0000050,1.53e-08,9;CL:0000838,3.67e-08,12;CL:0002250,7.33e-08,3;CL:0000034,8.32e-08,97;CL:0000763,1.14e-07,16;CL:0000068,1.52e-07,3;CL:0002202,1.52e-07,3;CL:0000069,1.52e-07,3;CL:0002632,1.52e-07,3;CL:0002368,1.52e-07,3;CL:0000307,1.52e-07,3;CL:0000377,1.52e-07,3;CL:0000542,1.87e-07,13;CL:0000051,1.87e-07,13;CL:0000723,5.39e-07,91;CL:0000048,5.39e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.59e-08!15;UBERON:0001007!6.71e-07!128;UBERON:0001555!6.71e-07!128;UBERON:0007026!6.71e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.35e-15,15;UBERON:0002384,2.52e-13,46;UBERON:0001242,6.76e-11,13;UBERON:0001262,6.76e-11,13;UBERON:0004786,6.76e-11,13;UBERON:0003350,1.55e-09,9;UBERON:0004808,1.55e-09,9;UBERON:0001277,1.55e-09,9;UBERON:0004923,2.12e-08,24;UBERON:0000485,1.20e-07,11;UBERON:0003126,1.52e-07,3;UBERON:0001005,1.52e-07,3;UBERON:0007196,1.52e-07,3;UBERON:0001558,1.52e-07,3;UBERON:0000160,8.04e-07,31 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,15.4256747766483,14.0250804384977,0.671517087647559,7.2419918584613,0.774739940649458,1.54867594366833,3.27690336850791,0.856089841127525,0.638177271962691,1.54080656938085,0.961624426608971,0,2.42970320867791,2.79824751251259,1.89277299214943,1.7824876368746,2.12194825899015,0.0850432901510698,0,2.08959831311148,11.8394392867121,10.782236210157,0.57423196411502,0.86152399231815,1.50829862880122,23.372880593134,1.26015064879965,0.221730510655305,3.81018404075779,0,0,2.59966457776147,3.82339684324532,3.26670970019791,0,0,0,0,0,0,0.251793635951155,0,0,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,5.36904339384756,2.90144856804538,1.00828139742739,0.514518872071894,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0.56276261003168,0,0,0,0,0.757261933331841,1.66257432234928,2.31891590961342,18.0689014166091,0.679971333707751,0.539703191637817,0.649776417447669,0,0.561777680527007,0,3.11743205523443,3.18005617059306,0.422530259330042,1.28326477414318,0,0,4.32982082022428,2.28023878927589,2.02209778005913,0.34255163915718,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0,0,0,0,0.213288250535234,0,0.38660238396628,0.605050573870028,1.11189021922435,0.951128130562796,0.474529061544512,1.81168850196412,1.00534083520108,0.596869416123452,0.779856348476481,0.898819408654221,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0,0.123397163921801,0.592905254174298,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.896987067609561,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0,0,0.390267295715598,0,0,0,0.163863314715738,0,0,1.50791283939272,2.17562273527484,0,0,0,0.234423373184406,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0.119372344003136,0.164140899745061,0.582961673259701,0,0,0,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0.474503990371703,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,0.226730383615211,1.10992976687032,0.448569283047378,1.51096154727671,0.19318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0,0,1.54667864109319,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.526139422875686,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0.220591419119515,0 | |||
|short_description=p1@ENSMUST00000122186 | |||
}} |
Revision as of 20:08, 14 September 2013
Short description: | p1@ENSMUST00000122186 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000122186_5end |
Coexpression cluster: | MCL_coexpression_mm9:1417 |
Association with transcript: | -103bp_to_ENSMUST00000122186_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucosa | 9.35e-15 | 15 |
connective tissue | 2.52e-13 | 46 |
intestinal mucosa | 6.76e-11 | 13 |
wall of intestine | 6.76e-11 | 13 |
gastrointestinal system mucosa | 6.76e-11 | 13 |
epithelium of mucosa | 1.55e-09 | 9 |
gastrointestinal system epithelium | 1.55e-09 | 9 |
intestinal epithelium | 1.55e-09 | 9 |
organ component layer | 2.12e-08 | 24 |
simple columnar epithelium | 1.20e-07 | 11 |
trachea | 1.52e-07 | 3 |
respiratory airway | 1.52e-07 | 3 |
tracheobronchial tree | 1.52e-07 | 3 |
lower respiratory tract | 1.52e-07 | 3 |
intestine | 8.04e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.