FFCP PHASE1:Hg19::chr1:202163015..202163027,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59352 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19719 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HBX8 | |||
|association_with_transcript=-1bp_to_ENST00000367278_5end | |||
|coexpression_cluster_id=C3921 | |||
|description=CAGE_peak_8_at_LGR6_5end | |||
|id=chr1:202163015..202163027,+ | |||
|ontology_enrichment_celltype=CL:0000623!2.09e-08!3;CL:0000825!2.09e-08!3;CL:0000625!8.44e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.37e-09;7!CL:0000586;5.37e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.06e-09,7;CL:0000586,6.06e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0010227;8.63e-16;1!UBERON:0006242;8.63e-16;1!UBERON:0006298;2.06e-15;1!UBERON:0006965;1.20e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;1.50e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.61e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.16e-27!115;UBERON:0002298!4.19e-17!8;UBERON:0001049!7.30e-15!57;UBERON:0005068!7.30e-15!57;UBERON:0006241!7.30e-15!57;UBERON:0007135!7.30e-15!57;UBERON:0003076!9.56e-14!15;UBERON:0003057!9.56e-14!15;UBERON:0003075!2.11e-12!86;UBERON:0007284!2.11e-12!86;UBERON:0002346!1.42e-11!90;UBERON:0002616!3.71e-11!59;UBERON:0004733!1.01e-10!12;UBERON:0002028!1.01e-10!12;UBERON:0007277!1.01e-10!12;UBERON:0001017!1.30e-10!82;UBERON:0005743!7.22e-10!86;UBERON:0004732!8.39e-10!13;UBERON:0000955!9.76e-10!69;UBERON:0006238!9.76e-10!69;UBERON:0000988!1.69e-09!3;UBERON:0001896!2.78e-09!3;UBERON:0005290!2.78e-09!3;UBERON:0010096!2.78e-09!3;UBERON:0000073!1.97e-08!94;UBERON:0001016!1.97e-08!94;UBERON:0003135!2.05e-08!11;UBERON:0002148!6.87e-07!2;UBERON:0009662!6.87e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;1.05e-19;3!UBERON:0002079;8.63e-16;1!UBERON:0001736;2.06e-15;1!UBERON:0002146;2.06e-15;1!UBERON:0005623;2.06e-15;1!UBERON:0002298;2.40e-10;6!UBERON:0002081;1.50e-08;2!UBERON:0000007;2.31e-08;2!UBERON:0002148;2.31e-08;2!UBERON:0001829;2.31e-08;2!UBERON:0006331;2.31e-08;2!UBERON:0009662;2.31e-08;2!UBERON:0000473;5.56e-08;8!UBERON:0002680;3.44e-07;9!UBERON:0001895;3.44e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,1.39e-19,3;UBERON:0002079,8.63e-16,1;UBERON:0002146,1.16e-15,1;UBERON:0005623,1.16e-15,1;UBERON:0001736,2.06e-15,1;UBERON:0006298,2.06e-15,1;UBERON:0002298,2.77e-10,6;UBERON:0007023,3.32e-09,114;UBERON:0003076,4.74e-09,15;UBERON:0003057,4.74e-09,15;UBERON:0002081,1.50e-08,2;UBERON:0010227,1.50e-08,2;UBERON:0002148,2.15e-08,2;UBERON:0006331,2.15e-08,2;UBERON:0009662,2.15e-08,2;UBERON:0001829,2.31e-08,2;UBERON:0000007,2.87e-08,2;UBERON:0000473,6.18e-08,8;UBERON:0002680,3.78e-07,9;UBERON:0001895,3.78e-07,9;UBERON:0010092,3.78e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,4.98119970627674,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,1.83328339209347,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,0.92562821219883,0,3.52407511158336,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.887432412294818,0.869349641179368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0,0,0.319267718114302,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0.147856086217045,0,0,0,0.126831620387814,0,0,0,0,0,0.535701835878287,0,0,1.13831095675649,0,0,0.342976018874837,1.08751572762931,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,1.6906229103336,0,0.375935671919414,0.515663103788617,0,0,0,0,0.730336388246517,1.37618785021362,0,0,0.203974470572744,0,0,0,0,0,0,0,0,1.32585478664576,0.26721740526556,1.19463369395298,0.50141507858475,0,0,0,0.517164979309476,0.213233981900981,0.23806443146374,0,0,0,0.12729431655633,0,0,0,0,0.358611026963382,0.332660356546013,0,0,0,2.0659796484515,0,0,0.406896178315738,0,0,0 | |||
|short_description=p8@LGR6 | |||
}} |
Revision as of 23:23, 10 January 2014
Short description: | p8@LGR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LGR6_5end |
Coexpression cluster: | C3921_aorta_gall_heart_skin_pituitary_lung_testicular |
Association with transcript: | -1bp_to_ENST00000367278_5end |
EntrezGene: | LGR6 |
HGNC: | 19719 |
UniProt: | Q9HBX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.06e-09 | 7 |
germ cell | 6.06e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
pons | 1.39e-19 | 3 |
left cardiac atrium | 8.63e-16 | 1 |
pulmonary valve | 1.16e-15 | 1 |
semi-lunar valve | 1.16e-15 | 1 |
submandibular gland | 2.06e-15 | 1 |
submandibular gland primordium | 2.06e-15 | 1 |
brainstem | 2.77e-10 | 6 |
adult organism | 3.32e-09 | 114 |
posterior neural tube | 4.74e-09 | 15 |
chordal neural plate | 4.74e-09 | 15 |
cardiac atrium | 1.50e-08 | 2 |
future cardiac atrium | 1.50e-08 | 2 |
locus ceruleus | 2.15e-08 | 2 |
brainstem nucleus | 2.15e-08 | 2 |
hindbrain nucleus | 2.15e-08 | 2 |
major salivary gland | 2.31e-08 | 2 |
pituitary gland | 2.87e-08 | 2 |
testis | 6.18e-08 | 8 |
regional part of metencephalon | 3.78e-07 | 9 |
metencephalon | 3.78e-07 | 9 |
future metencephalon | 3.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.61e-08 | 2 |