FFCP PHASE1:Hg19::chr1:241695175..241695189,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8564 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6381 | |||
|TSSclassifier=not | |||
|UniProt=O15229 | |||
|association_with_transcript=-244bp_to_ENST00000366558,ENST00000366559,NM_003679_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_KMO_5end | |||
|id=chr1:241695175..241695189,+ | |||
|ontology_enrichment_celltype=CL:0002009!8.06e-84!65;CL:0002194!2.44e-83!63;CL:0000576!2.44e-83!63;CL:0000040!2.44e-83!63;CL:0000559!2.44e-83!63;CL:0002057!7.79e-83!42;CL:0000860!2.04e-76!45;CL:0000557!1.80e-75!71;CL:0000766!2.29e-75!76;CL:0000839!1.56e-73!70;CL:0000763!2.61e-60!112;CL:0000049!2.61e-60!112;CL:0000738!4.21e-47!140;CL:0002087!4.32e-46!119;CL:0000037!1.04e-43!172;CL:0000566!1.04e-43!172;CL:0000988!2.80e-40!182;CL:0002031!5.28e-40!124;CL:0002032!2.74e-38!165;CL:0000837!2.74e-38!165;CL:0002393!5.13e-18!9;CL:0002397!5.13e-18!9;CL:0000134!3.56e-12!358;CL:0002320!1.31e-11!365;CL:0000219!9.44e-11!390;CL:0000840!9.38e-09!5;CL:0001029!9.38e-09!5;CL:0000451!1.39e-08!10;CL:0000990!5.90e-08!8;CL:0000048!2.52e-07!430;CL:0000034!4.46e-07!444;CL:0000842!4.47e-07!3;CL:0000767!4.56e-07!3;CL:0000875!4.96e-07!3;CL:0002396!4.96e-07!3;CL:0000723!5.28e-07!436;CL:0002619!8.34e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.57e-94;33!CL:0002057;4.57e-94;33!CL:0000473;2.05e-67;39!CL:0000234;2.05e-67;39!CL:0000576;3.09e-53;48!CL:0000766;3.09e-39;69!CL:0002087;2.82e-17;104!CL:0000763;1.73e-15;100!CL:0002393;5.78e-10;6!CL:0002397;5.78e-10;6!CL:0000738;2.24e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.90e-108,42;CL:0002057,5.90e-108,42;CL:0000473,3.67e-101,48;CL:0000234,3.67e-101,48;CL:0002194,5.45e-80,59;CL:0000576,5.45e-80,59;CL:0000040,5.45e-80,59;CL:0000559,5.45e-80,59;CL:0002009,2.94e-77,61;CL:0000839,3.88e-71,66;CL:0000557,5.06e-70,67;CL:0000766,6.71e-65,72;CL:0000763,7.17e-42,108;CL:0000049,7.17e-42,108;CL:0002087,4.75e-39,115;CL:0002031,3.11e-37,120;CL:0000738,2.61e-32,136;CL:0002032,1.47e-26,161;CL:0000837,1.47e-26,161;CL:0000037,2.99e-25,168;CL:0000988,1.01e-23,177;CL:0002393,3.16e-11,9;CL:0002397,3.16e-11,9;CL:0000134,2.53e-09,354;CL:0002320,4.84e-09,361;CL:0000219,4.80e-08,386;CL:0000034,3.30e-07,441;CL:0000048,7.97e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;2.57e-84;42!CL:0000049;6.55e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.03e-68!102;UBERON:0003061!3.03e-68!102;UBERON:0002371!5.95e-68!80;UBERON:0001474!3.94e-62!86;UBERON:0002193!1.32e-60!112;UBERON:0004765!1.28e-52!101;UBERON:0001434!1.28e-52!101;UBERON:0002405!5.10e-46!115;UBERON:0002204!1.30e-25!167;UBERON:0003081!3.94e-23!216;UBERON:0002384!7.71e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.79e-61,76;UBERON:0001474,1.67e-56,82;UBERON:0004765,4.11e-51,90;UBERON:0002390,2.93e-50,98;UBERON:0003061,2.93e-50,98;UBERON:0002405,2.51e-49,93;UBERON:0001434,1.42e-45,100;UBERON:0002193,3.36e-45,108;UBERON:0002204,1.97e-25,167;UBERON:0003081,8.06e-22,203;UBERON:0000926,3.01e-12,315;UBERON:0004120,3.01e-12,315;UBERON:0006603,3.01e-12,315;UBERON:0002384,1.18e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.309632246632152,0,0,0,0.232401601740905,0,0.293600439334847,1.10799081706375,1.00272223735071,2.38711957787437,0.223915474239924,0.32389366601898,0.77272670290256,0.726991193897824,1.51150377475524,0.970336244751265,3.25400651667958,3.28934310417461,4.95530193432166,1.1507695692886,2.0492856522328,3.07426898855161,7.23965929546899,11.6187243045089,8.12558919566051,2.07066573496865,4.09359225086769,6.96642801779762,7.95818120164347,11.5534449747394,11.5080682643827,0.989553900560148,1.59570926097305,0.426224750532694,4.64334781805734,9.07816359505824,6.22822248995575,0.75374599577023,0,0.868755378820466,2.42159801053347,12.5214396235772,15.1901945971625,0.845021145247767,0.212604299965044,0.209658645508376,0.22465726229299,0.750884464207532,0.64290234678832,0.285012743741249,0.59675003159727,1.0959849225878,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.649094787309367,0.522389211897802,0.26591592103773,0.715471872916026,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936017060556951,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.899895566206002,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490696182767533,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0.471797825567689,0,0,1.91317428091515,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@KMO | |||
}} |
Revision as of 01:02, 11 January 2014
Short description: | p6@KMO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KMO_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -244bp_to_ENST00000366558, ENST00000366559, NM_003679_5end |
EntrezGene: | KMO |
HGNC: | 6381 |
UniProt: | O15229 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.90e-108 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.90e-108 | 42 |
defensive cell | 3.67e-101 | 48 |
phagocyte | 3.67e-101 | 48 |
monopoietic cell | 5.45e-80 | 59 |
monocyte | 5.45e-80 | 59 |
monoblast | 5.45e-80 | 59 |
promonocyte | 5.45e-80 | 59 |
macrophage dendritic cell progenitor | 2.94e-77 | 61 |
myeloid lineage restricted progenitor cell | 3.88e-71 | 66 |
granulocyte monocyte progenitor cell | 5.06e-70 | 67 |
myeloid leukocyte | 6.71e-65 | 72 |
myeloid cell | 7.17e-42 | 108 |
common myeloid progenitor | 7.17e-42 | 108 |
nongranular leukocyte | 4.75e-39 | 115 |
hematopoietic lineage restricted progenitor cell | 3.11e-37 | 120 |
leukocyte | 2.61e-32 | 136 |
hematopoietic oligopotent progenitor cell | 1.47e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-26 | 161 |
hematopoietic stem cell | 2.99e-25 | 168 |
hematopoietic cell | 1.01e-23 | 177 |
intermediate monocyte | 3.16e-11 | 9 |
CD14-positive, CD16-positive monocyte | 3.16e-11 | 9 |
mesenchymal cell | 2.53e-09 | 354 |
connective tissue cell | 4.84e-09 | 361 |
motile cell | 4.80e-08 | 386 |
stem cell | 3.30e-07 | 441 |
multi fate stem cell | 7.97e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.79e-61 | 76 |
bone element | 1.67e-56 | 82 |
skeletal element | 4.11e-51 | 90 |
hematopoietic system | 2.93e-50 | 98 |
blood island | 2.93e-50 | 98 |
immune system | 2.51e-49 | 93 |
skeletal system | 1.42e-45 | 100 |
hemolymphoid system | 3.36e-45 | 108 |
musculoskeletal system | 1.97e-25 | 167 |
lateral plate mesoderm | 8.06e-22 | 203 |
mesoderm | 3.01e-12 | 315 |
mesoderm-derived structure | 3.01e-12 | 315 |
presumptive mesoderm | 3.01e-12 | 315 |
connective tissue | 1.18e-08 | 371 |