FFCP PHASE1:Hg19::chr10:73638280..73638322,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_at_chr10:73638280..73638322,- | |||
|id=chr10:73638280..73638322,- | |||
|ontology_enrichment_celltype=CL:0000839!1.11e-16!70;CL:0000763!2.02e-15!112;CL:0000049!2.02e-15!112;CL:0000557!5.38e-15!71;CL:0002032!5.98e-15!165;CL:0000837!5.98e-15!165;CL:0000037!8.99e-15!172;CL:0000566!8.99e-15!172;CL:0000988!4.84e-14!182;CL:0002194!6.44e-14!63;CL:0000576!6.44e-14!63;CL:0000040!6.44e-14!63;CL:0000559!6.44e-14!63;CL:0000766!1.71e-13!76;CL:0002009!2.83e-13!65;CL:0002031!3.84e-13!124;CL:0000738!3.05e-12!140;CL:0002087!1.58e-11!119;CL:0000039!2.56e-10!7;CL:0000586!2.56e-10!7;CL:0002057!3.03e-08!42;CL:0000860!1.97e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.64e-20;6!CL:0000039;1.34e-17;7!CL:0000586;1.34e-17;7!CL:0000473;9.86e-11;39!CL:0000234;9.86e-11;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.86e-20,6;CL:0000039,1.05e-17,7;CL:0000586,1.05e-17,7;CL:0000473,1.57e-11,48;CL:0000234,1.57e-11,48;CL:0002194,5.87e-09,59;CL:0000576,5.87e-09,59;CL:0000040,5.87e-09,59;CL:0000559,5.87e-09,59;CL:0002087,6.95e-09,115;CL:0000037,9.70e-09,168;CL:0002009,1.26e-08,61;CL:0000738,1.70e-08,136;CL:0000988,3.79e-08,177;CL:0002032,6.19e-08,161;CL:0000837,6.19e-08,161;CL:0000839,6.97e-08,66;CL:0000557,9.52e-08,67;CL:0000766,3.98e-07,72;CL:0002031,4.74e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.18e-12;10!UBERON:0005564;2.18e-12;10 | |||
|ontology_enrichment_disease=DOID:1240!5.04e-09!39;DOID:2531!5.78e-09!51;DOID:0060083!5.78e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:12603;2.93e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.82e-09,1;DOID:2531,8.98e-07,51;DOID:0060083,8.98e-07,51;DOID:1240,9.27e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.01e-13!102;UBERON:0003061!1.01e-13!102;UBERON:0002371!1.97e-12!80;UBERON:0001474!6.14e-12!86;UBERON:0002193!1.14e-11!112;UBERON:0002405!2.95e-10!115;UBERON:0004765!4.93e-09!101;UBERON:0001434!4.93e-09!101;UBERON:0004177!3.82e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.87e-17;2!UBERON:0005058;3.87e-17;2!UBERON:0009113;3.87e-17;2!UBERON:0000473;1.97e-15;8!UBERON:0003135;2.81e-11;11!UBERON:0004177;2.24e-07;5!UBERON:0005057;2.24e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.60e-15,8;UBERON:0003135,2.42e-11,11;UBERON:0002370,5.12e-09,4;UBERON:0005058,5.12e-09,4;UBERON:0009113,5.12e-09,4;UBERON:0003295,5.12e-09,4;UBERON:0005562,5.12e-09,4;UBERON:0002405,4.84e-08,93;UBERON:0000974,1.31e-07,10;UBERON:0002390,1.53e-07,98;UBERON:0003061,1.53e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601633342410425,0,0,0.647787332037959,0.515151135268373,0,4.1566353805769,0,0.232429036905685,4.93401465626191,0,0,0,0,0,0.645484683583826,0,0.188242339542605,3.27487380069415,0,0,4.17207735198922,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0,0.521482918420201,0,0,1.10483290796269,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0,1.0404181360211,0,0,0,0,0,0,0,0.616339038092582,0,0.144119953416961,0.12624243342638,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,3.01354254859276,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.438519753291869,0,3.07740150139667,0,0.650756789328606,1.03041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,6.13150477914872,0,66.304198000722,2.71024663638998,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0,1.23087398947712,9.19549306818343,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0.108647371922008,0.638002319463839,0,0,11.241262801531,0,0.166211681900156,0.225595660617181,0,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0.182454789215666,0.391329237864179,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.782205530939212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909894705249887,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0.490738592505128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.327796715891087,0.253397002022874,2.03977659483963,1.3360870263278,7.99485625953151,1.50424523575425,0,0.267964130156178,0,0,0,1.1903221573187,31.0026767212829,10.9872244303668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,4.22674966541155,0 | |||
|short_description=p@chr10:73638280..73638322,- | |||
}} |
Revision as of 03:24, 11 January 2014
Short description: | p@chr10:73638280..73638322, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73638280..73638322, - |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.86e-20 | 6 |
germ line cell | 1.05e-17 | 7 |
germ cell | 1.05e-17 | 7 |
defensive cell | 1.57e-11 | 48 |
phagocyte | 1.57e-11 | 48 |
monopoietic cell | 5.87e-09 | 59 |
monocyte | 5.87e-09 | 59 |
monoblast | 5.87e-09 | 59 |
promonocyte | 5.87e-09 | 59 |
nongranular leukocyte | 6.95e-09 | 115 |
hematopoietic stem cell | 9.70e-09 | 168 |
macrophage dendritic cell progenitor | 1.26e-08 | 61 |
leukocyte | 1.70e-08 | 136 |
hematopoietic cell | 3.79e-08 | 177 |
hematopoietic oligopotent progenitor cell | 6.19e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.19e-08 | 161 |
myeloid lineage restricted progenitor cell | 6.97e-08 | 66 |
granulocyte monocyte progenitor cell | 9.52e-08 | 67 |
myeloid leukocyte | 3.98e-07 | 72 |
hematopoietic lineage restricted progenitor cell | 4.74e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
testis | 1.60e-15 | 8 |
male reproductive organ | 2.42e-11 | 11 |
thymus | 5.12e-09 | 4 |
hemolymphoid system gland | 5.12e-09 | 4 |
thymic region | 5.12e-09 | 4 |
pharyngeal gland | 5.12e-09 | 4 |
thymus primordium | 5.12e-09 | 4 |
immune system | 4.84e-08 | 93 |
neck | 1.31e-07 | 10 |
hematopoietic system | 1.53e-07 | 98 |
blood island | 1.53e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.82e-09 | 1 |
hematologic cancer | 8.98e-07 | 51 |
immune system cancer | 8.98e-07 | 51 |
leukemia | 9.27e-07 | 39 |