FFCP PHASE1:Hg19::chr10:80053535..80053546,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-52bp_to_ENST00000434440_5end | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_1_at_ENST00000434440_5end | |||
|id=chr10:80053535..80053546,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.32e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.03e-17;4!DOID:1325;9.89e-11;7!DOID:3904;9.89e-11;7!DOID:3905;1.21e-08;9!DOID:3093;7.48e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.03e-17,4;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9;DOID:3093,7.48e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0003056!2.21e-22!61;UBERON:0000966!1.23e-19!5;UBERON:0005388!1.23e-19!5;UBERON:0001802!1.23e-19!5;UBERON:0000073!2.36e-16!94;UBERON:0001016!2.36e-16!94;UBERON:0003075!1.85e-15!86;UBERON:0007284!1.85e-15!86;UBERON:0005743!2.29e-15!86;UBERON:0002780!6.51e-15!41;UBERON:0001890!6.51e-15!41;UBERON:0006240!6.51e-15!41;UBERON:0002346!1.05e-14!90;UBERON:0003080!1.52e-14!42;UBERON:0000955!2.56e-13!69;UBERON:0006238!2.56e-13!69;UBERON:0000033!3.41e-12!123;UBERON:0003296!1.02e-11!4;UBERON:0010133!1.02e-11!4;UBERON:0002038!1.07e-11!1;UBERON:0009661!1.07e-11!1;UBERON:0000153!1.52e-11!129;UBERON:0007811!1.52e-11!129;UBERON:0002336!1.81e-11!1;UBERON:0001018!1.81e-11!1;UBERON:0002473!1.81e-11!1;UBERON:0005340!1.81e-11!1;UBERON:0002316!1.81e-11!1;UBERON:0003544!1.81e-11!1;UBERON:0001020!1.81e-11!1;UBERON:0005970!1.81e-11!1;UBERON:0002437!1.81e-11!1;UBERON:0001017!4.80e-11!82;UBERON:0001049!1.50e-10!57;UBERON:0005068!1.50e-10!57;UBERON:0006241!1.50e-10!57;UBERON:0007135!1.50e-10!57;UBERON:0002791!1.62e-10!33;UBERON:0001893!3.32e-10!34;UBERON:0002616!3.61e-10!59;UBERON:0004121!7.56e-10!169;UBERON:0000924!1.42e-09!173;UBERON:0006601!1.42e-09!173;UBERON:0000019!4.65e-09!19;UBERON:0000047!4.65e-09!19;UBERON:0004088!4.65e-09!19;UBERON:0003072!4.65e-09!19;UBERON:0003071!4.65e-09!19;UBERON:0004128!4.65e-09!19;UBERON:0000970!1.29e-08!20;UBERON:0002104!3.26e-08!21;UBERON:0001456!3.26e-08!21;UBERON:0000020!1.64e-07!23;UBERON:0002020!2.77e-07!34;UBERON:0003528!2.77e-07!34;UBERON:0001032!3.32e-07!24;UBERON:0004456!3.32e-07!24;UBERON:0001894!4.60e-07!7;UBERON:0006222!4.60e-07!7;UBERON:0009663!8.59e-07!7;UBERON:0001905!9.44e-07!2;UBERON:0002757!9.44e-07!2;UBERON:0010134!9.44e-07!2;UBERON:0002784!9.44e-07!2;UBERON:0005408!9.44e-07!2;UBERON:0001899!9.44e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.04e-34;2!UBERON:0002757;5.04e-34;2!UBERON:0010134;5.04e-34;2!UBERON:0005408;5.04e-34;2!UBERON:0001899;5.04e-34;2!UBERON:0003296;8.69e-18;4!UBERON:0010133;8.69e-18;4!UBERON:0002784;8.69e-18;4!UBERON:0001894;8.99e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.04e-34,2;UBERON:0002757,5.04e-34,2;UBERON:0010134,5.04e-34,2;UBERON:0005408,5.04e-34,2;UBERON:0001899,5.04e-34,2;UBERON:0003296,8.69e-18,4;UBERON:0010133,8.69e-18,4;UBERON:0002784,8.69e-18,4;UBERON:0001894,8.99e-11,7;UBERON:0006222,8.99e-11,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.71596400098254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,2.01770233331294,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285906176706625,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97892930141772,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000434440 | |||
}} |
Revision as of 03:40, 11 January 2014
Short description: | p1@ENST00000434440 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000434440_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | -52bp_to_ENST00000434440_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.04e-34 | 2 |
regional part of epithalamus | 5.04e-34 | 2 |
secretory circumventricular organ | 5.04e-34 | 2 |
circumventricular organ | 5.04e-34 | 2 |
epithalamus | 5.04e-34 | 2 |
gland of diencephalon | 8.69e-18 | 4 |
neuroendocrine gland | 8.69e-18 | 4 |
regional part of diencephalon | 8.69e-18 | 4 |
diencephalon | 8.99e-11 | 7 |
future diencephalon | 8.99e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.03e-17 | 4 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |
nervous system cancer | 7.48e-07 | 11 |