FFCP PHASE1:Hg19::chr11:34645791..34645836,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26298 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3246 | |||
|TSSclassifier=strong | |||
|UniProt=E9PQR6,E9PN75,E9PPS9 | |||
|association_with_transcript=0bp_to_ENST00000525253,ENST00000529527,ENST00000531728_5end | |||
|coexpression_cluster_id=C3148 | |||
|description=CAGE_peak_3_at_EHF_5end | |||
|id=chr11:34645791..34645836,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.97e-18!43;CL:0000223!5.96e-13!59;CL:0002368!4.80e-11!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.45e-17;42!CL:0002368;9.54e-16;13!CL:0002202;2.65e-09;9!CL:0002632;2.65e-09;9!CL:0000244;1.35e-07;4!CL:0000731;1.35e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.09e-21,42;CL:0000223,8.07e-17,58;CL:0002368,8.58e-16,13;CL:0000066,3.26e-10,253;CL:0002202,2.36e-09,9;CL:0002632,2.36e-09,9;CL:0000244,1.42e-07,4;CL:0000731,1.42e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;6.05e-09;58 | |||
|ontology_enrichment_disease=DOID:299!4.85e-09!25;DOID:1749!1.86e-08!14;DOID:305!2.50e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:299;1.31e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.14e-10,25;DOID:305,5.17e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.44e-19!169;UBERON:0000925!9.44e-19!169;UBERON:0006595!9.44e-19!169;UBERON:0007023!1.79e-15!115;UBERON:0001007!1.81e-14!155;UBERON:0001555!1.81e-14!155;UBERON:0007026!1.81e-14!155;UBERON:0004921!3.62e-13!129;UBERON:0004185!3.62e-13!129;UBERON:0001004!2.20e-12!72;UBERON:0000077!1.04e-11!130;UBERON:0000161!3.57e-10!35;UBERON:0000166!2.55e-09!21;UBERON:0001041!1.21e-08!98;UBERON:0000065!1.38e-08!53;UBERON:0000464!1.10e-07!104;UBERON:0004175!2.27e-07!25;UBERON:0000974!2.42e-07!10;UBERON:0002294!2.59e-07!7;UBERON:0001173!2.59e-07!7;UBERON:0004912!2.59e-07!7;UBERON:0000365!9.70e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;4.53e-12;33!UBERON:0004175;8.68e-11;21!UBERON:0001041;1.45e-10;14!UBERON:0002294;3.45e-10;7!UBERON:0001173;3.45e-10;7!UBERON:0000058;2.25e-09;10!UBERON:0005178;3.27e-09;34!UBERON:0002224;3.27e-09;34!UBERON:0000365;3.93e-09;5!UBERON:0000486;8.12e-09;12!UBERON:0007196;1.10e-08;15!UBERON:0001558;1.10e-08;15!UBERON:0005181;4.15e-08;35!UBERON:0006947;1.13e-07;3!UBERON:0004054;1.13e-07;3!UBERON:0005910;1.54e-07;6!UBERON:0001555;3.01e-07;54!UBERON:0003133;3.21e-07;44!UBERON:0000161;3.72e-07;19!UBERON:0000166;3.72e-07;19!UBERON:0003126;6.43e-07;7!UBERON:0001005;6.43e-07;7!UBERON:0002110;6.77e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.37e-24,160;UBERON:0000925,2.37e-24,160;UBERON:0006595,2.37e-24,160;UBERON:0001007,5.36e-19,145;UBERON:0001555,5.36e-19,145;UBERON:0007026,5.36e-19,145;UBERON:0004921,9.92e-18,118;UBERON:0001004,4.44e-15,74;UBERON:0001041,1.06e-11,87;UBERON:0000161,1.29e-11,36;UBERON:0000065,4.69e-11,54;UBERON:0005178,4.20e-10,34;UBERON:0002224,4.20e-10,34;UBERON:0005181,1.06e-09,35;UBERON:0005911,1.96e-09,82;UBERON:0000365,4.12e-09,5;UBERON:0000166,7.51e-09,22;UBERON:0005156,8.90e-09,59;UBERON:0000990,8.90e-09,59;UBERON:0007196,9.97e-09,15;UBERON:0001558,9.97e-09,15;UBERON:0004175,1.41e-08,25;UBERON:0003133,3.37e-08,48;UBERON:0002294,1.06e-07,9;UBERON:0001173,1.06e-07,9;UBERON:0004912,1.06e-07,9;UBERON:0006947,1.13e-07,3;UBERON:0004054,1.13e-07,3;UBERON:0005910,1.60e-07,6;UBERON:0000915,3.89e-07,52;UBERON:0003126,5.91e-07,7;UBERON:0001005,5.91e-07,7;UBERON:0002110,6.98e-07,3;UBERON:0006242,6.98e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,10.1136334692682,7.53014796945625,4.80680213216824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33692548262208,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0.370784442784429,0.649094787309367,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,5.21804303540901,11.7280831854059,11.4721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,1.60846355858609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.3968724348004,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2329365839288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.6572311442712,11.1417996612435,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,16.5284915360978,15.5673954565736,9.57095343709381,8.59841137272174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.69776901804097,6.70302275535787,9.80018863751903,0.941438007767792,2.15252686335615,5.05414427002877,4.87773168890343,12.4050636111758,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,1.47024129588619,0,0,0,0.956557636372934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2869783689836,0,0,0,0,0,0,0,0,0,0,23.2373462659731,62.4931208058861,3.38721580026819,0.828851746593443,2.01546198283421,0,0.123084805461069,0,19.1419587943806,3.22238114416096,0,6.90503839458535,0,0,0,0,0,0,64.1956399972076,3.62499787717397,0.455173793141999,1.5255219017566,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.219385397153973,0,19.6587479432831,6.15602068030377,0,0,0,0,0.31900115973192,0.549585560411174,0,0,0,0,0,0,0,0,0,0,5.87638109372932,0,0,1.99052386215701,7.34197785377715,9.77648231893801,13.0469296619474,4.81899361891361,4.80340967725095,0.269604531922708,0,0,0,0,27.1914025078184,200.054292244641,4.83962864194656,0,0,0.150323419414493,0,0,0,0,0,0,0,17.5295335718482,13.4249584457697,30.8189591294625,24.8111868903683,0,0,0,0,9.89287968181878,0,2.48578814858586,0,0,0,16.8174189151931,56.5921270975828,5.12287187374446,0,23.1985571618111,0,0,17.286575758578,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0.77380195455795,0.0607495566580247,0,6.30445658393585,1.88836517285993,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0.646414781807753,0.13223260174269,0,22.5540807141335,5.12579580324934,7.23139803458463,3.31391244277756,0,0,0,10.8518013820931,0,0,0,0,0,0,0,0,0.573409195690071,1.10929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.265729680626726,1.79921933681429,0,0.491545817507439,8.66379705770371,0,0,0,0,0,2.23807212351111,9.33115890049459,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,1.46742878817343,0.231051332300676,0,0,0,4.96388167105098,0.20170506870352,0.781514011233092,0,0,27.9448002950216,0,0,0,0,0,208.337951405729,7.44316767583941,0,1.27762427639595,0,0,0.606965604236632,0.682986574053893,0.354809480650555,0.115233987555779,0,0,0,0,0,13.2653326917369,0,10.0897978792964,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,13.4690506705974,0,0,85.6152444052352,0,0,257.419326516085,2.7492824225286,2.79185747097888,0.955538938977433,1.90154234056247,36.9044878393314,23.6520774465603,0,0,0,1.45713297917742,0,0,0,0,0,0,9.56959560538514,0,17.8720572617379,0.245148321753905,27.5741560108902,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,1.60482733378337,3.65168194123259,74.7728731949401,0,0,0,0,6.34832208618481,0,0,0,0,0,0,0,0,0,0,1.36401656792831,0.267964130156178,0,0.103432995861895,18.9778243891873,4.52322419781107,0.129177819672012,0.186224142887574,0,0,0,5.87835219321796,7.52913262387618,20.0035597453325,12.9099969706817,13.3064142618405,6.34945495165601,0,0,62.4285154640779,0,2.07810455110873,5.69654649642034,1.33151354837103,0.201273793591026,0 | |||
|short_description=p3@EHF | |||
}} |
Revision as of 07:12, 11 January 2014
Short description: | p3@EHF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EHF_5end |
Coexpression cluster: | C3148_seminal_parotid_ductus_salivary_submaxillary_papillotubular_breast |
Association with transcript: | 0bp_to_ENST00000525253, ENST00000529527, ENST00000531728_5end |
EntrezGene: | EHF |
HGNC: | 3246 |
UniProt: | E9PQR6E9PN75E9PPS9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.09e-21 | 42 |
endodermal cell | 8.07e-17 | 58 |
respiratory epithelial cell | 8.58e-16 | 13 |
epithelial cell | 3.26e-10 | 253 |
epithelial cell of tracheobronchial tree | 2.36e-09 | 9 |
epithelial cell of lower respiratory tract | 2.36e-09 | 9 |
transitional epithelial cell | 1.42e-07 | 4 |
urothelial cell | 1.42e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.37e-24 | 160 |
endoderm | 2.37e-24 | 160 |
presumptive endoderm | 2.37e-24 | 160 |
digestive system | 5.36e-19 | 145 |
digestive tract | 5.36e-19 | 145 |
primitive gut | 5.36e-19 | 145 |
subdivision of digestive tract | 9.92e-18 | 118 |
respiratory system | 4.44e-15 | 74 |
foregut | 1.06e-11 | 87 |
orifice | 1.29e-11 | 36 |
respiratory tract | 4.69e-11 | 54 |
thoracic cavity element | 4.20e-10 | 34 |
thoracic cavity | 4.20e-10 | 34 |
thoracic segment organ | 1.06e-09 | 35 |
endo-epithelium | 1.96e-09 | 82 |
urothelium | 4.12e-09 | 5 |
oral opening | 7.51e-09 | 22 |
reproductive structure | 8.90e-09 | 59 |
reproductive system | 8.90e-09 | 59 |
tracheobronchial tree | 9.97e-09 | 15 |
lower respiratory tract | 9.97e-09 | 15 |
internal genitalia | 1.41e-08 | 25 |
reproductive organ | 3.37e-08 | 48 |
biliary system | 1.06e-07 | 9 |
biliary tree | 1.06e-07 | 9 |
biliary bud | 1.06e-07 | 9 |
male genital duct | 1.13e-07 | 3 |
internal male genitalia | 1.13e-07 | 3 |
transitional epithelium | 1.60e-07 | 6 |
thoracic segment of trunk | 3.89e-07 | 52 |
trachea | 5.91e-07 | 7 |
respiratory airway | 5.91e-07 | 7 |
gallbladder | 6.98e-07 | 3 |
gall bladder primordium | 6.98e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.14e-10 | 25 |
carcinoma | 5.17e-10 | 106 |