FFCP PHASE1:Hg19::chr11:47410806..47410828,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr11:47410806..47410828,+ | |||
|id=chr11:47410806..47410828,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.20e-82!42;CL:0000860!1.19e-75!45;CL:0000766!2.24e-66!76;CL:0002009!6.35e-54!65;CL:0002194!6.25e-53!63;CL:0000576!6.25e-53!63;CL:0000040!6.25e-53!63;CL:0000559!6.25e-53!63;CL:0000763!7.13e-50!112;CL:0000049!7.13e-50!112;CL:0000557!1.61e-48!71;CL:0000738!7.34e-47!140;CL:0000839!1.17e-46!70;CL:0000037!3.08e-37!172;CL:0000566!3.08e-37!172;CL:0000988!1.97e-34!182;CL:0002032!2.26e-34!165;CL:0000837!2.26e-34!165;CL:0002087!3.27e-33!119;CL:0002031!5.15e-28!124;CL:0000094!2.38e-23!8;CL:0000081!1.54e-16!11;CL:0000134!8.16e-11!358;CL:0002393!1.26e-10!9;CL:0002397!1.26e-10!9;CL:0002320!2.35e-10!365;CL:0000775!3.03e-10!3;CL:0000767!3.89e-09!3;CL:0000219!9.55e-09!390;CL:0000842!1.07e-08!3;CL:0000771!2.11e-07!2;CL:0000048!7.47e-07!430;CL:0000034!9.11e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.44e-35;33!CL:0002057;1.44e-35;33!CL:0000094;2.68e-28;8!CL:0000473;1.14e-25;39!CL:0000234;1.14e-25;39!CL:0000766;1.32e-22;69!CL:0000576;3.18e-22;48!CL:0000081;1.93e-20;11!CL:0000775;4.19e-20;3!CL:0000771;4.84e-14;2!CL:0000763;4.07e-12;100!CL:0002393;7.15e-10;6!CL:0002397;7.15e-10;6!CL:0000738;6.65e-08;136!CL:0002087;2.43e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.30e-43,72;CL:0000860,3.02e-42,42;CL:0002057,3.02e-42,42;CL:0000473,1.66e-36,48;CL:0000234,1.66e-36,48;CL:0002194,1.83e-28,59;CL:0000576,1.83e-28,59;CL:0000040,1.83e-28,59;CL:0000559,1.83e-28,59;CL:0000094,2.46e-28,8;CL:0002009,1.99e-27,61;CL:0000763,2.80e-27,108;CL:0000049,2.80e-27,108;CL:0000839,4.20e-25,66;CL:0000557,1.11e-24,67;CL:0000738,8.92e-23,136;CL:0000081,1.81e-20,11;CL:0000775,4.20e-20,3;CL:0000037,1.61e-17,168;CL:0002032,8.99e-17,161;CL:0000837,8.99e-17,161;CL:0000988,2.22e-16,177;CL:0002087,1.17e-14,115;CL:0000771,4.85e-14,2;CL:0002031,2.99e-12,120 | |||
|ontology_enrichment_development_v019=CL:0002057;8.21e-32;42!CL:0000049;2.05e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.74e-61!102;UBERON:0003061!8.74e-61!102;UBERON:0002193!3.32e-54!112;UBERON:0002371!6.39e-42!80;UBERON:0001474!2.77e-38!86;UBERON:0004765!4.47e-31!101;UBERON:0001434!4.47e-31!101;UBERON:0002405!3.55e-29!115;UBERON:0003081!6.12e-23!216;UBERON:0000178!2.86e-21!15;UBERON:0000179!2.86e-21!15;UBERON:0000463!2.86e-21!15;UBERON:0002204!8.20e-15!167;UBERON:0002384!9.91e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.51e-25;15!UBERON:0000179;2.51e-25;15!UBERON:0000463;2.51e-25;15!UBERON:0002390;5.64e-11;32!UBERON:0002193;2.26e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.32e-36,98;UBERON:0003061,3.32e-36,98;UBERON:0002193,2.01e-32,108;UBERON:0000178,2.21e-25,15;UBERON:0000179,2.21e-25,15;UBERON:0000463,2.21e-25,15;UBERON:0002371,2.32e-21,76;UBERON:0001474,1.51e-19,82;UBERON:0004765,1.67e-17,90;UBERON:0002405,7.92e-17,93;UBERON:0001434,2.10e-15,100;UBERON:0003081,6.03e-15,203;UBERON:0000926,8.10e-08,315;UBERON:0004120,8.10e-08,315;UBERON:0006603,8.10e-08,315;UBERON:0002204,8.19e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.767658796194425,0.77408061658038,0,0,0,0,0,0,1.10799081706375,2.80762226458198,7.59538047505481,0,0,0,1.01778767145695,1.13362783106643,0.727752183563449,1.62700325833979,0.822335776043652,0.929119112685311,1.7261543539329,1.7931249457037,0.47296445977717,2.41321976515633,0,1.35426486594342,1.50593871634084,1.36453075028923,0.224723484445085,1.53041946185451,0.320929027076094,1.27867425159808,0.659702600373432,0.398927315243264,1.70489900213078,1.7412554317715,1.13477044938228,1.86846674698672,0.502497330513487,0,0.217188844705117,0.605399502633369,0.368277635987565,0.632924774881769,0.211255286311942,0.425208599930087,0.209658645508376,0.786300418025466,0.150176892841506,0.964353520182481,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.2629085333764,46.533631697799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,33.7053160776232,32.9077605124427,62.5767425288414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.94142780736755,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.55213326462519,2.29391162142713,2.84823593587081,0.238231775457789,1.23408681925858,5.18778648954174,6.48037724685738,5.55187623405989,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.398594520940089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:47410806..47410828,+ | |||
}} |
Revision as of 07:37, 11 January 2014
Short description: | p@chr11:47410806..47410828, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:47410806..47410828, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.30e-43 | 72 |
classical monocyte | 3.02e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.02e-42 | 42 |
defensive cell | 1.66e-36 | 48 |
phagocyte | 1.66e-36 | 48 |
monopoietic cell | 1.83e-28 | 59 |
monocyte | 1.83e-28 | 59 |
monoblast | 1.83e-28 | 59 |
promonocyte | 1.83e-28 | 59 |
granulocyte | 2.46e-28 | 8 |
macrophage dendritic cell progenitor | 1.99e-27 | 61 |
myeloid cell | 2.80e-27 | 108 |
common myeloid progenitor | 2.80e-27 | 108 |
myeloid lineage restricted progenitor cell | 4.20e-25 | 66 |
granulocyte monocyte progenitor cell | 1.11e-24 | 67 |
leukocyte | 8.92e-23 | 136 |
blood cell | 1.81e-20 | 11 |
neutrophil | 4.20e-20 | 3 |
hematopoietic stem cell | 1.61e-17 | 168 |
hematopoietic oligopotent progenitor cell | 8.99e-17 | 161 |
hematopoietic multipotent progenitor cell | 8.99e-17 | 161 |
hematopoietic cell | 2.22e-16 | 177 |
nongranular leukocyte | 1.17e-14 | 115 |
eosinophil | 4.85e-14 | 2 |
hematopoietic lineage restricted progenitor cell | 2.99e-12 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.32e-36 | 98 |
blood island | 3.32e-36 | 98 |
hemolymphoid system | 2.01e-32 | 108 |
blood | 2.21e-25 | 15 |
haemolymphatic fluid | 2.21e-25 | 15 |
organism substance | 2.21e-25 | 15 |
bone marrow | 2.32e-21 | 76 |
bone element | 1.51e-19 | 82 |
skeletal element | 1.67e-17 | 90 |
immune system | 7.92e-17 | 93 |
skeletal system | 2.10e-15 | 100 |
lateral plate mesoderm | 6.03e-15 | 203 |
mesoderm | 8.10e-08 | 315 |
mesoderm-derived structure | 8.10e-08 | 315 |
presumptive mesoderm | 8.10e-08 | 315 |
musculoskeletal system | 8.19e-08 | 167 |