FFCP PHASE1:Hg19::chr11:60934867..60934881,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:60934867..60934881,- | |||
|id=chr11:60934867..60934881,- | |||
|ontology_enrichment_celltype=CL:0002057!7.25e-56!42;CL:0002009!4.48e-53!65;CL:0000766!4.81e-53!76;CL:0000557!3.38e-51!71;CL:0000860!3.77e-51!45;CL:0002194!2.49e-50!63;CL:0000576!2.49e-50!63;CL:0000040!2.49e-50!63;CL:0000559!2.49e-50!63;CL:0000839!1.41e-47!70;CL:0000763!1.54e-47!112;CL:0000049!1.54e-47!112;CL:0000738!9.27e-37!140;CL:0000988!7.59e-33!182;CL:0000037!7.79e-33!172;CL:0000566!7.79e-33!172;CL:0002032!1.18e-31!165;CL:0000837!1.18e-31!165;CL:0002087!5.71e-29!119;CL:0002031!1.88e-28!124;CL:0002393!3.99e-13!9;CL:0002397!3.99e-13!9;CL:0000453!4.67e-08!5;CL:0000080!1.13e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.08e-34;39!CL:0000234;2.08e-34;39!CL:0000860;6.50e-33;33!CL:0002057;6.50e-33;33!CL:0000576;2.98e-25;48!CL:0000766;2.73e-22;69!CL:0002393;1.77e-13;6!CL:0002397;1.77e-13;6!CL:0000763;6.77e-10;100!CL:0000235;6.49e-08;6!CL:0000039;2.63e-07;7!CL:0000586;2.63e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.40e-48,48;CL:0000234,1.40e-48,48;CL:0000860,4.47e-42,42;CL:0002057,4.47e-42,42;CL:0002009,7.74e-40,61;CL:0002194,8.14e-38,59;CL:0000576,8.14e-38,59;CL:0000040,8.14e-38,59;CL:0000559,8.14e-38,59;CL:0000766,4.54e-36,72;CL:0000557,7.65e-36,67;CL:0000839,2.57e-33,66;CL:0000763,2.86e-31,108;CL:0000049,2.86e-31,108;CL:0002032,5.70e-19,161;CL:0000837,5.70e-19,161;CL:0000738,3.48e-18,136;CL:0000037,6.35e-18,168;CL:0002031,9.04e-18,120;CL:0002087,4.83e-17,115;CL:0000988,1.07e-16,177;CL:0002393,6.60e-09,9;CL:0002397,6.60e-09,9;CL:0000235,9.42e-08,6;CL:0000039,2.53e-07,7;CL:0000586,2.53e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002057;2.72e-33;42!CL:0000049;7.69e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.90e-43!80;UBERON:0002390!1.94e-43!102;UBERON:0003061!1.94e-43!102;UBERON:0001474!3.45e-39!86;UBERON:0002193!8.82e-38!112;UBERON:0004765!8.81e-34!101;UBERON:0001434!8.81e-34!101;UBERON:0002405!1.81e-28!115;UBERON:0002204!8.88e-14!167;UBERON:0003081!5.49e-12!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.12e-31,76;UBERON:0001474,2.21e-28,82;UBERON:0004765,2.07e-25,90;UBERON:0001434,1.81e-24,100;UBERON:0002405,2.00e-24,93;UBERON:0002390,6.43e-23,98;UBERON:0003061,6.43e-23,98;UBERON:0002193,2.55e-20,108;UBERON:0002204,1.71e-12,167;UBERON:0003081,2.11e-08,203;UBERON:0000926,1.43e-07,315;UBERON:0004120,1.43e-07,315;UBERON:0006603,1.43e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.157421562627358,0.393364276848904,0.383829398097213,1.08371286321253,0,0,0,0,0,0,2.21598163412751,2.00544447470142,1.08505435357926,0,0,0,0.872389432677388,1.88937971844405,1.21292030593908,1.62700325833979,1.23350366406548,1.23882548358041,0.575384784644301,2.56160706529101,0.709446689665756,1.03423704220986,0.645484683583826,0,1.50593871634084,3.547779950752,0.898893937780338,0.918251677112708,2.56743221660875,0.639337125799041,0.329851300186716,0.997318288108159,1.27867425159808,2.32167390902867,1.13477044938228,0.622822248995575,1.00499466102697,2.08593167368081,0.65156653411535,1.81619850790011,0.368277635987565,0.632924774881769,1.26753171787165,0.850417199860174,0.838634582033504,0.336985893439485,0.450530678524519,0.16072558669708,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,1.0404181360211,0,0,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.00902836572851,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,1.14117339516596,0.156679895773023,0,0,0,0,2.55507742614196,0.343505344755765,0.307240764308458,0.447352215784832,0.667396566847634,1.56310476321632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0.724999575434793,1.365521379426,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,1.56531695145672,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0.979923974143776,0.435296032902013,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.782205530939212,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,2.59582700648688,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,1.1248694577575,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0.316801009558219,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0,2.17372795087739,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.531459361253452,0.490696182767533,0,0.245772908753719,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0.183428598521679,2.19498765685643,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.335566295393377,0,0,0,0,0,0,7.01818390386317,0,0,0,0,9.51065914470043,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0.499705779624645,0.178553938605658,0,0,0,0,0,1.10440093535229,0.203974470572744,0,0,0,0,0,0,0,0,4.79347499787314,0.801652215796681,2.48116228744081,3.76061308938563,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0.320568492303233 | |||
|short_description=p@chr11:60934867..60934881,- | |||
}} |
Revision as of 07:58, 11 January 2014
Short description: | p@chr11:60934867..60934881, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60934867..60934881, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.40e-48 | 48 |
phagocyte | 1.40e-48 | 48 |
classical monocyte | 4.47e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.47e-42 | 42 |
macrophage dendritic cell progenitor | 7.74e-40 | 61 |
monopoietic cell | 8.14e-38 | 59 |
monocyte | 8.14e-38 | 59 |
monoblast | 8.14e-38 | 59 |
promonocyte | 8.14e-38 | 59 |
myeloid leukocyte | 4.54e-36 | 72 |
granulocyte monocyte progenitor cell | 7.65e-36 | 67 |
myeloid lineage restricted progenitor cell | 2.57e-33 | 66 |
myeloid cell | 2.86e-31 | 108 |
common myeloid progenitor | 2.86e-31 | 108 |
hematopoietic oligopotent progenitor cell | 5.70e-19 | 161 |
hematopoietic multipotent progenitor cell | 5.70e-19 | 161 |
leukocyte | 3.48e-18 | 136 |
hematopoietic stem cell | 6.35e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 9.04e-18 | 120 |
nongranular leukocyte | 4.83e-17 | 115 |
hematopoietic cell | 1.07e-16 | 177 |
intermediate monocyte | 6.60e-09 | 9 |
CD14-positive, CD16-positive monocyte | 6.60e-09 | 9 |
macrophage | 9.42e-08 | 6 |
germ line cell | 2.53e-07 | 7 |
germ cell | 2.53e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.12e-31 | 76 |
bone element | 2.21e-28 | 82 |
skeletal element | 2.07e-25 | 90 |
skeletal system | 1.81e-24 | 100 |
immune system | 2.00e-24 | 93 |
hematopoietic system | 6.43e-23 | 98 |
blood island | 6.43e-23 | 98 |
hemolymphoid system | 2.55e-20 | 108 |
musculoskeletal system | 1.71e-12 | 167 |
lateral plate mesoderm | 2.11e-08 | 203 |
mesoderm | 1.43e-07 | 315 |
mesoderm-derived structure | 1.43e-07 | 315 |
presumptive mesoderm | 1.43e-07 | 315 |