FFCP PHASE1:Hg19::chr12:9911348..9911359,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1697 | |||
|description=CAGE_peak_at_chr12:9911348..9911359,+ | |||
|id=chr12:9911348..9911359,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.82e-50!140;CL:0000838!8.06e-47!52;CL:0000542!1.03e-45!53;CL:0000051!1.03e-45!53;CL:0000037!1.00e-44!172;CL:0000566!1.00e-44!172;CL:0002087!6.19e-44!119;CL:0002031!2.08e-41!124;CL:0000988!3.26e-41!182;CL:0002032!8.51e-38!165;CL:0000837!8.51e-38!165;CL:0000791!5.97e-29!18;CL:0000789!5.97e-29!18;CL:0002420!5.97e-29!18;CL:0002419!5.97e-29!18;CL:0000790!5.97e-29!18;CL:0000084!6.43e-22!25;CL:0000827!6.43e-22!25;CL:0000945!6.89e-20!24;CL:0000826!6.89e-20!24;CL:0000625!7.91e-19!11;CL:0000624!7.48e-14!6;CL:0000134!7.74e-12!358;CL:0002320!2.83e-11!365;CL:0000236!3.10e-11!14;CL:0002057!5.20e-11!42;CL:0000860!5.67e-10!45;CL:0000219!2.57e-09!390;CL:0000623!3.01e-08!3;CL:0000825!3.01e-08!3;CL:0000766!7.98e-08!76;CL:0000898!1.78e-07!3;CL:0000048!1.80e-07!430;CL:0000034!3.49e-07!444;CL:0000723!3.82e-07!436;CL:0000763!4.38e-07!112;CL:0000049!4.38e-07!112;CL:0000839!4.58e-07!70;CL:0000557!6.70e-07!71;CL:0000842!9.10e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.76e-39;18!CL:0000789;1.76e-39;18!CL:0002419;1.76e-39;18!CL:0000624;1.22e-30;6!CL:0000084;5.45e-28;25!CL:0000623;5.13e-24;3!CL:0000542;2.15e-21;53!CL:0000625;7.43e-17;11!CL:0000815;1.23e-15;2!CL:0000792;1.23e-15;2!CL:0002677;1.23e-15;2!CL:0000898;9.80e-11;3!CL:0000236;2.28e-09;13!CL:0002087;5.87e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.84e-40,18;CL:0000789,5.84e-40,18;CL:0002420,5.84e-40,18;CL:0002419,5.84e-40,18;CL:0000790,5.84e-40,18;CL:0000838,1.85e-38,52;CL:0000542,1.13e-37,53;CL:0000051,1.13e-37,53;CL:0000624,3.76e-31,6;CL:0000084,2.48e-28,25;CL:0000827,2.48e-28,25;CL:0000623,4.97e-24,3;CL:0000825,4.97e-24,3;CL:0002087,1.62e-17,115;CL:0000625,5.71e-17,11;CL:0002031,1.18e-16,120;CL:0000815,7.88e-16,2;CL:0000792,7.88e-16,2;CL:0002677,7.88e-16,2;CL:0000738,2.60e-14,136;CL:0002032,1.41e-11,161;CL:0000837,1.41e-11,161;CL:0000037,5.90e-11,168;CL:0000898,7.30e-11,3;CL:0000988,3.14e-10,177;CL:0000236,1.32e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.76e-39;18!CL:0000051;2.15e-21;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.64e-10!375;UBERON:0002390!1.63e-08!102;UBERON:0003061!1.63e-08!102;UBERON:0002193!7.99e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.0787107813136792,0,0.767658796194425,0.619264493264304,0,0,0,0.0774672005803016,0.142169232487422,0.880801318004542,0.553995408531877,0.200544447470142,1.08505435357926,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.945928919554341,0,0.645484683583826,0,0,0,0,0.306083892370903,0.320929027076094,0,0.659702600373432,0,0.426224750532694,0.870627715885752,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0.632924774881769,0,0,0.209658645508376,0.22465726229299,0,0,0,0,0,3.51992488922645,0.546138611262131,0,0.853460445133014,0.800791974072025,1.14950487990897,0.661044872784862,0,1.1384259382189,0,1.14681968437569,0,0,0.526768169550154,2.360517241366,1.96505381374582,1.64481199199607,0.501559486172034,1.95553359980154,1.4203434172042,1.94826728407911,0.779873198196215,1.17842362989935,1.55073726208535,2.16643091012012,0.128091319725675,0.390178042679635,0.657751618414705,1.38175008892924,0,1.03800594213442,1.07016331235885,1.04535523804977,0.339928028092699,0.383220493601921,1.71813722741315,0.759059076058509,0.95569624297229,0.651083453856419,0,0.301150238155546,0.511946444617674,1.24930726552346,0.473554504088034,2.46338399076314,1.61285394579786,1.60464117470104,2.89648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0.720599767084807,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,4.09692392233083,3.20857590699371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0.320568492303233 | |||
|short_description=p@chr12:9911348..9911359,+ | |||
}} |
Revision as of 12:02, 11 January 2014
Short description: | p@chr12:9911348..9911359, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:9911348..9911359, + |
Coexpression cluster: | C1697_CD19_CD4_Natural_CD8_Basophils_blood_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.84e-40 | 18 |
alpha-beta T cell | 5.84e-40 | 18 |
immature T cell | 5.84e-40 | 18 |
mature T cell | 5.84e-40 | 18 |
immature alpha-beta T cell | 5.84e-40 | 18 |
lymphoid lineage restricted progenitor cell | 1.85e-38 | 52 |
lymphocyte | 1.13e-37 | 53 |
common lymphoid progenitor | 1.13e-37 | 53 |
CD4-positive, alpha-beta T cell | 3.76e-31 | 6 |
T cell | 2.48e-28 | 25 |
pro-T cell | 2.48e-28 | 25 |
natural killer cell | 4.97e-24 | 3 |
pro-NK cell | 4.97e-24 | 3 |
nongranular leukocyte | 1.62e-17 | 115 |
CD8-positive, alpha-beta T cell | 5.71e-17 | 11 |
hematopoietic lineage restricted progenitor cell | 1.18e-16 | 120 |
regulatory T cell | 7.88e-16 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.88e-16 | 2 |
naive regulatory T cell | 7.88e-16 | 2 |
leukocyte | 2.60e-14 | 136 |
hematopoietic oligopotent progenitor cell | 1.41e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-11 | 161 |
hematopoietic stem cell | 5.90e-11 | 168 |
naive T cell | 7.30e-11 | 3 |
hematopoietic cell | 3.14e-10 | 177 |
B cell | 1.32e-08 | 14 |