FFCP PHASE1:Hg19::chr12:51787972..51787981,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C168 | |||
|description=CAGE_peak_at_chr12:51787972..51787981,- | |||
|id=chr12:51787972..51787981,- | |||
|ontology_enrichment_celltype=CL:0002057!3.48e-88!42;CL:0000860!9.79e-82!45;CL:0000839!2.39e-66!70;CL:0000557!2.70e-65!71;CL:0000766!1.93e-60!76;CL:0002194!1.71e-58!63;CL:0000576!1.71e-58!63;CL:0000040!1.71e-58!63;CL:0000559!1.71e-58!63;CL:0002009!1.86e-56!65;CL:0000763!3.55e-38!112;CL:0000049!3.55e-38!112;CL:0002031!1.08e-35!124;CL:0000738!1.48e-30!140;CL:0002087!4.72e-29!119;CL:0002032!1.62e-24!165;CL:0000837!1.62e-24!165;CL:0000037!3.85e-23!172;CL:0000566!3.85e-23!172;CL:0000988!2.33e-21!182;CL:0000134!1.95e-14!358;CL:0002320!6.00e-14!365;CL:0000219!6.67e-14!390;CL:0002274!3.13e-12!5;CL:0000457!3.13e-12!5;CL:0002191!3.13e-12!5;CL:0000097!3.13e-12!5;CL:0000831!3.13e-12!5;CL:0002028!3.13e-12!5;CL:0000048!3.56e-10!430;CL:0000723!6.97e-10!436;CL:0000034!1.66e-09!444;CL:0000163!8.57e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.69e-83;33!CL:0002057;2.69e-83;33!CL:0000473;2.27e-56;39!CL:0000234;2.27e-56;39!CL:0000576;3.45e-36;48!CL:0000766;8.70e-22;69!CL:0000763;1.98e-14;100!CL:0002087;5.93e-11;104!CL:0000097;1.28e-09;5!CL:0000219;3.23e-07;193!CL:0000738;8.79e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.65e-69,42;CL:0002057,2.65e-69,42;CL:0000473,2.19e-60,48;CL:0000234,2.19e-60,48;CL:0000839,5.76e-54,66;CL:0000557,3.85e-53,67;CL:0000766,2.35e-49,72;CL:0002194,6.79e-48,59;CL:0000576,6.79e-48,59;CL:0000040,6.79e-48,59;CL:0000559,6.79e-48,59;CL:0002009,2.78e-46,61;CL:0000763,2.52e-32,108;CL:0000049,2.52e-32,108;CL:0002031,6.78e-29,120;CL:0000738,2.99e-25,136;CL:0002087,1.03e-23,115;CL:0002032,5.42e-21,161;CL:0000837,5.42e-21,161;CL:0000037,5.03e-20,168;CL:0000988,6.84e-19,177;CL:0000097,1.31e-09,5;CL:0002028,1.31e-09,5;CL:0000134,3.33e-08,354;CL:0002320,5.41e-08,361;CL:0000219,2.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.32e-50;42!CL:0000049;2.34e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.46e-57!80;UBERON:0001474!2.09e-52!86;UBERON:0004765!2.28e-48!101;UBERON:0001434!2.28e-48!101;UBERON:0002390!8.48e-43!102;UBERON:0003061!8.48e-43!102;UBERON:0002193!3.55e-38!112;UBERON:0002405!6.05e-37!115;UBERON:0002204!1.52e-25!167;UBERON:0003081!6.77e-19!216;UBERON:0002384!2.78e-13!375;UBERON:0000062!2.82e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-46,76;UBERON:0001474,3.79e-43,82;UBERON:0004765,3.67e-39,90;UBERON:0002405,7.68e-38,93;UBERON:0002390,8.11e-36,98;UBERON:0003061,8.11e-36,98;UBERON:0001434,4.60e-35,100;UBERON:0002193,2.52e-32,108;UBERON:0002204,3.70e-20,167;UBERON:0003081,3.56e-16,203;UBERON:0000926,1.52e-09,315;UBERON:0004120,1.52e-09,315;UBERON:0006603,1.52e-09,315;UBERON:0002384,1.05e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,1.62700325833979,0.822335776043652,2.47765096716083,1.43846196161075,1.0246428261164,1.89185783910868,2.75796544589295,7.74581620300591,6.77132432971709,0.376484679085209,0.545812300115692,0.674170453335254,2.14258724659632,3.53021929783703,3.19668562899521,0,0.398927315243264,0,0.580418477257168,1.13477044938228,0.622822248995575,1.00499466102697,1.0429658368404,2.6062661364614,1.81619850790011,1.10483290796269,0.949387162322653,0,0,0,0.112328631146495,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0.985326475791887,0,6.42717158176393,0.144119953416961,5.42842463733434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:51787972..51787981,- | |||
}} |
Revision as of 13:29, 11 January 2014
Short description: | p@chr12:51787972..51787981, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:51787972..51787981, - |
Coexpression cluster: | C168_Mast_CD14_immature_Basophils_Eosinophils_CD34_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.65e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.65e-69 | 42 |
defensive cell | 2.19e-60 | 48 |
phagocyte | 2.19e-60 | 48 |
myeloid lineage restricted progenitor cell | 5.76e-54 | 66 |
granulocyte monocyte progenitor cell | 3.85e-53 | 67 |
myeloid leukocyte | 2.35e-49 | 72 |
monopoietic cell | 6.79e-48 | 59 |
monocyte | 6.79e-48 | 59 |
monoblast | 6.79e-48 | 59 |
promonocyte | 6.79e-48 | 59 |
macrophage dendritic cell progenitor | 2.78e-46 | 61 |
myeloid cell | 2.52e-32 | 108 |
common myeloid progenitor | 2.52e-32 | 108 |
hematopoietic lineage restricted progenitor cell | 6.78e-29 | 120 |
leukocyte | 2.99e-25 | 136 |
nongranular leukocyte | 1.03e-23 | 115 |
hematopoietic oligopotent progenitor cell | 5.42e-21 | 161 |
hematopoietic multipotent progenitor cell | 5.42e-21 | 161 |
hematopoietic stem cell | 5.03e-20 | 168 |
hematopoietic cell | 6.84e-19 | 177 |
mast cell | 1.31e-09 | 5 |
basophil mast progenitor cell | 1.31e-09 | 5 |
mesenchymal cell | 3.33e-08 | 354 |
connective tissue cell | 5.41e-08 | 361 |
motile cell | 2.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.12e-46 | 76 |
bone element | 3.79e-43 | 82 |
skeletal element | 3.67e-39 | 90 |
immune system | 7.68e-38 | 93 |
hematopoietic system | 8.11e-36 | 98 |
blood island | 8.11e-36 | 98 |
skeletal system | 4.60e-35 | 100 |
hemolymphoid system | 2.52e-32 | 108 |
musculoskeletal system | 3.70e-20 | 167 |
lateral plate mesoderm | 3.56e-16 | 203 |
mesoderm | 1.52e-09 | 315 |
mesoderm-derived structure | 1.52e-09 | 315 |
presumptive mesoderm | 1.52e-09 | 315 |
connective tissue | 1.05e-07 | 371 |