FFCP PHASE1:Hg19::chr12:54764450..54764473,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:54764450..54764473,- | |||
|id=chr12:54764450..54764473,- | |||
|ontology_enrichment_celltype=CL:0002194!3.10e-20!63;CL:0000576!3.10e-20!63;CL:0000040!3.10e-20!63;CL:0000559!3.10e-20!63;CL:0002057!2.02e-19!42;CL:0002009!5.74e-19!65;CL:0000860!6.74e-18!45;CL:0000839!8.08e-17!70;CL:0000766!1.31e-16!76;CL:0000557!2.69e-16!71;CL:0000763!1.49e-14!112;CL:0000049!1.49e-14!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.92e-45;33!CL:0002057;4.92e-45;33!CL:0000473;2.06e-42;39!CL:0000234;2.06e-42;39!CL:0000576;7.40e-23;48!CL:0000766;8.77e-16;69!CL:0000763;4.01e-11;100!CL:0000317;2.49e-10;2!CL:1000448;2.49e-10;2!CL:0002308;2.49e-10;2!CL:0002140;2.49e-10;2!CL:0000244;7.45e-10;4!CL:0000731;7.45e-10;4!CL:0000235;2.57e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.67e-46,48;CL:0000234,7.67e-46,48;CL:0000860,7.53e-40,42;CL:0002057,7.53e-40,42;CL:0002194,1.74e-35,59;CL:0000576,1.74e-35,59;CL:0000040,1.74e-35,59;CL:0000559,1.74e-35,59;CL:0002009,3.77e-34,61;CL:0000839,3.69e-31,66;CL:0000557,1.29e-30,67;CL:0000766,4.10e-28,72;CL:0000763,4.54e-22,108;CL:0000049,4.54e-22,108;CL:0002087,1.54e-15,115;CL:0002031,1.16e-14,120;CL:0002032,9.17e-13,161;CL:0000837,9.17e-13,161;CL:0000738,2.73e-12,136;CL:0000037,5.62e-12,168;CL:0000988,4.66e-11,177;CL:0000317,2.74e-10,2;CL:1000448,2.74e-10,2;CL:0002308,2.74e-10,2;CL:0002140,2.74e-10,2;CL:0000244,3.08e-10,4;CL:0000731,3.08e-10,4;CL:0000235,2.93e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;8.94e-33;42!CL:0000049;7.80e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.82e-14!80;UBERON:0004765!1.02e-12!101;UBERON:0001434!1.02e-12!101;UBERON:0001474!1.02e-12!86;UBERON:0002390!7.19e-11!102;UBERON:0003061!7.19e-11!102;UBERON:0002193!4.44e-09!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.49e-10;2!UBERON:0007771;2.49e-10;2!UBERON:0003297;2.49e-10;2!UBERON:0001821;2.49e-10;2!UBERON:0003487;2.49e-10;2!UBERON:0001820;2.49e-10;2!UBERON:0000365;5.69e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.60e-29,76;UBERON:0001474,3.17e-26,82;UBERON:0004765,2.20e-23,90;UBERON:0002405,1.91e-22,93;UBERON:0002390,5.25e-21,98;UBERON:0003061,5.25e-21,98;UBERON:0001434,1.80e-20,100;UBERON:0002193,1.58e-18,108;UBERON:0002204,4.97e-11,167;UBERON:0002419,2.74e-10,2;UBERON:0007771,2.74e-10,2;UBERON:0003297,2.74e-10,2;UBERON:0001821,2.74e-10,2;UBERON:0003487,2.74e-10,2;UBERON:0001820,2.74e-10,2;UBERON:0005089,2.74e-10,2;UBERON:0005088,2.74e-10,2;UBERON:0003081,7.36e-09,203;UBERON:0000365,2.83e-08,5;UBERON:0005910,5.83e-07,6 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0.739508020333575,0,0,0,0.553995408531877,0.802177789880567,0.434021741431704,0.447830948479849,0.647787332037959,0,3.48955773070955,2.26725566213286,2.42584061187816,2.32429036905685,1.23350366406548,0.619412741790207,3.74000110018796,1.7931249457037,1.41889337933151,1.37898272294647,1.93645405075148,0,3.9530891303947,2.18324920046277,0.224723484445085,1.22433556948361,0,1.27867425159808,3.29851300186716,2.59302754908121,1.70489900213078,1.7412554317715,0,0,0.502497330513487,0.521482918420201,1.08594422352558,1.21079900526674,0.368277635987565,0,1.05627643155971,0.425208599930087,0.628975936525128,0.44931452458598,0.300353785683013,0.964353520182481,0,0.79566670879636,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0.576175924479999,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0,0,0.184099797284599,0.323292113637624,0.355009592516614,0.10075209822764,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.348581828608555,0.10366105501537,0,0,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.402115889646523,0.185176890317059,0,0,0,0.34779121492523,0.117408694235822,0,0.462985512576611,0,0,0,0.246217006087397,0.468008530278475,0.891786973732369,0.93733833986777,0,0.283550194484773,0.0895585227028483,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,3.64871341923571,2.00902836572851,2.10833939483032,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,2.27407504055985,0,0,0,0.0868836144680828,0.391602314925481,0.686286847621712,0.206768026122887,0.647142602455851,0.74709290462411,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,1.00253235151642,0.368323955743585,0,0,0.262248829918848,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,3.44559322797703,10.4009639365843,0,0.193341436584244,0.154048617114644,0.307007349452259,0,0.214840489736547,0,0.0852266274161009,0,0.330569830721956,0.768760269460425,0.255225424989168,0.4046311234222,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0.409499734223957,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0,0.288666338176536,0.670302275535787,0,0,1.72202149068492,1.68471475667626,1.7737206141467,0.689170200620878,0,0,0,0,0.411362273086194,0,0,0,0.534120355637366,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,1.01575066680962,0,0.403599414382095,0.851692475380653,0,0.307240764308458,0.671028323677248,0,0,0.278406173895242,0,0.811367035427949,1.33228787199128,1.4098700508785,0,0,0.728163130497081,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0.211125408127993,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,1.11136990144637,0,0.371072392647405,1.99613798001194,0,0,0,0.568967241427498,0.254253650292766,0,0,0.291604613383254,0,0,0.241192877250816,1.52581736317083,0.221158519862449,0.295547618953547,0,0,0.975966209950223,0,0,0,0.0897576444097721,0.108647371922008,0,0.274792780205587,0,0,0.156980256395025,0.498635045700469,0.451191321234361,0.19606253431774,0.503464760927528,0.37950746544837,0.476809736941136,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0.173559738335131,0.391969589657511,0.0870592065804026,0.17472666824203,0.171986032471617,0,0,0.164230914106418,0.193978032976839,0,1.35588444468319,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0.144090417154106,0.458146384663663,0,0,0,0.942776138467182,0,0.104602846312333,0,0,0,0.958337652243951,0,0,0,0,0.229160424011684,1.43574604915363,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.408610218334727,0,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| |||
|short_description=p@chr12:54764450..54764473,- | |||
}} |
Revision as of 13:50, 11 January 2014
Short description: | p@chr12:54764450..54764473, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:54764450..54764473, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.67e-46 | 48 |
phagocyte | 7.67e-46 | 48 |
classical monocyte | 7.53e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.53e-40 | 42 |
monopoietic cell | 1.74e-35 | 59 |
monocyte | 1.74e-35 | 59 |
monoblast | 1.74e-35 | 59 |
promonocyte | 1.74e-35 | 59 |
macrophage dendritic cell progenitor | 3.77e-34 | 61 |
myeloid lineage restricted progenitor cell | 3.69e-31 | 66 |
granulocyte monocyte progenitor cell | 1.29e-30 | 67 |
myeloid leukocyte | 4.10e-28 | 72 |
myeloid cell | 4.54e-22 | 108 |
common myeloid progenitor | 4.54e-22 | 108 |
nongranular leukocyte | 1.54e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.16e-14 | 120 |
hematopoietic oligopotent progenitor cell | 9.17e-13 | 161 |
hematopoietic multipotent progenitor cell | 9.17e-13 | 161 |
leukocyte | 2.73e-12 | 136 |
hematopoietic stem cell | 5.62e-12 | 168 |
hematopoietic cell | 4.66e-11 | 177 |
sebum secreting cell | 2.74e-10 | 2 |
epithelial cell of sweat gland | 2.74e-10 | 2 |
epithelial cell of skin gland | 2.74e-10 | 2 |
acinar cell of sebaceous gland | 2.74e-10 | 2 |
transitional epithelial cell | 3.08e-10 | 4 |
urothelial cell | 3.08e-10 | 4 |
macrophage | 2.93e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.60e-29 | 76 |
bone element | 3.17e-26 | 82 |
skeletal element | 2.20e-23 | 90 |
immune system | 1.91e-22 | 93 |
hematopoietic system | 5.25e-21 | 98 |
blood island | 5.25e-21 | 98 |
skeletal system | 1.80e-20 | 100 |
hemolymphoid system | 1.58e-18 | 108 |
musculoskeletal system | 4.97e-11 | 167 |
skin gland | 2.74e-10 | 2 |
epidermis gland | 2.74e-10 | 2 |
gland of integumental system | 2.74e-10 | 2 |
sebaceous gland | 2.74e-10 | 2 |
skin sebaceous gland | 2.74e-10 | 2 |
sweat gland | 2.74e-10 | 2 |
sweat gland placode | 2.74e-10 | 2 |
sebaceous gland placode | 2.74e-10 | 2 |
lateral plate mesoderm | 7.36e-09 | 203 |
urothelium | 2.83e-08 | 5 |
transitional epithelium | 5.83e-07 | 6 |