FFCP PHASE1:Hg19::chr12:70093190..70093199,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144453 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17105 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N1M1 | |||
|association_with_transcript=0bp_to_ENST00000330891,NM_032735,uc001svd.1,uc001sve.1,uc001svg.2,uc001svh.2,uc001svi.1,uc010stm.1_5end | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_5_at_BEST3_5end | |||
|id=chr12:70093190..70093199,- | |||
|ontology_enrichment_celltype=CL:0000242!6.11e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.55e-34;2!CL:0000242;1.55e-34;2!CL:0000312;1.84e-14;5!CL:0000240;3.25e-12;6!CL:0000311;3.25e-12;6!CL:0000079;3.25e-12;6!CL:0000237;3.25e-12;6!CL:0000362;1.90e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.56e-34,2;CL:0000312,1.84e-14,5;CL:0000240,3.26e-12,6;CL:0000311,3.26e-12,6;CL:0000079,3.26e-12,6;CL:0000237,3.26e-12,6;CL:0000036,3.26e-12,6;CL:0000357,3.26e-12,6;CL:0000114,3.26e-12,6;CL:0000362,1.90e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;3.25e-12;6!CL:0000114;3.25e-12;6!UBERON:0006241;8.62e-07;3!UBERON:0003057;8.62e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.86e-26!57;UBERON:0005068!6.86e-26!57;UBERON:0006241!6.86e-26!57;UBERON:0007135!6.86e-26!57;UBERON:0007023!9.44e-25!115;UBERON:0003076!1.08e-21!15;UBERON:0003057!1.08e-21!15;UBERON:0002298!2.00e-20!8;UBERON:0002616!4.38e-20!59;UBERON:0005743!3.32e-18!86;UBERON:0000955!6.61e-18!69;UBERON:0006238!6.61e-18!69;UBERON:0001017!1.10e-17!82;UBERON:0004733!2.29e-17!12;UBERON:0002028!2.29e-17!12;UBERON:0007277!2.29e-17!12;UBERON:0003075!7.27e-17!86;UBERON:0007284!7.27e-17!86;UBERON:0000073!6.11e-16!94;UBERON:0001016!6.11e-16!94;UBERON:0004732!6.31e-16!13;UBERON:0002346!7.31e-16!90;UBERON:0000153!6.77e-15!129;UBERON:0007811!6.77e-15!129;UBERON:0002020!5.56e-14!34;UBERON:0003528!5.56e-14!34;UBERON:0002308!5.96e-14!9;UBERON:0000125!5.96e-14!9;UBERON:0002791!4.41e-12!33;UBERON:0001893!1.16e-11!34;UBERON:0006331!1.71e-11!3;UBERON:0000988!4.29e-11!3;UBERON:0000033!4.85e-11!123;UBERON:0002780!5.71e-11!41;UBERON:0001890!5.71e-11!41;UBERON:0006240!5.71e-11!41;UBERON:0001896!6.51e-11!3;UBERON:0005290!6.51e-11!3;UBERON:0010096!6.51e-11!3;UBERON:0004121!6.87e-11!169;UBERON:0003080!1.19e-10!42;UBERON:0000924!1.76e-10!173;UBERON:0006601!1.76e-10!173;UBERON:0002420!1.00e-09!9;UBERON:0007245!1.00e-09!9;UBERON:0010009!1.00e-09!9;UBERON:0010011!1.00e-09!9;UBERON:0000454!1.00e-09!9;UBERON:0002680!1.30e-09!9;UBERON:0001895!1.30e-09!9;UBERON:0010092!1.30e-09!9;UBERON:0001869!1.35e-08!32;UBERON:0000483!1.39e-08!309;UBERON:0000475!1.80e-08!365;UBERON:0000341!1.93e-08!2;UBERON:0009663!2.00e-08!7;UBERON:0000119!2.05e-08!312;UBERON:0002148!2.88e-08!2;UBERON:0009662!2.88e-08!2;UBERON:0001873!4.75e-08!2;UBERON:0010122!4.75e-08!2;UBERON:0003056!1.11e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;2.66e-18;1!UBERON:0000026;2.66e-18;1!UBERON:0008784;2.66e-18;1!UBERON:0006058;2.66e-18;1!UBERON:0003663;2.66e-18;1!UBERON:0004256;2.66e-18;1!UBERON:0004708;2.66e-18;1!UBERON:0002101;2.66e-18;1!UBERON:0004709;2.66e-18;1!UBERON:0002529;2.66e-18;1!UBERON:0010538;2.66e-18;1!UBERON:0003661;2.66e-18;1!UBERON:0010890;2.66e-18;1!UBERON:0002471;2.66e-18;1!UBERON:0001383;2.66e-18;1!UBERON:0010758;2.66e-18;1!UBERON:0010707;2.66e-18;1!UBERON:0000978;2.66e-18;1!UBERON:0002103;2.66e-18;1!UBERON:0001665;2.66e-18;1!UBERON:0003823;2.66e-18;1!UBERON:0000154;2.66e-18;1!UBERON:0010709;2.66e-18;1!UBERON:0001134;6.68e-17;16!UBERON:0002036;6.68e-17;16!UBERON:0005090;7.97e-10;2!UBERON:0001630;7.97e-10;2!UBERON:0000341;1.44e-09;2!UBERON:0002385;8.31e-09;31!UBERON:0001015;8.31e-09;31!UBERON:0000383;8.31e-09;31!UBERON:0002240;8.62e-07;3!UBERON:0001723;8.62e-07;3!UBERON:0005174;8.62e-07;3!UBERON:0001033;8.62e-07;3!UBERON:0001137;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,2.66e-18,1;UBERON:0001389,2.66e-18,1;UBERON:0000026,2.66e-18,1;UBERON:0008784,2.66e-18,1;UBERON:0006058,2.66e-18,1;UBERON:0003663,2.66e-18,1;UBERON:0004256,2.66e-18,1;UBERON:0004708,2.66e-18,1;UBERON:0002101,2.66e-18,1;UBERON:0004709,2.66e-18,1;UBERON:0002529,2.66e-18,1;UBERON:0010538,2.66e-18,1;UBERON:0003661,2.66e-18,1;UBERON:0010890,2.66e-18,1;UBERON:0002471,2.66e-18,1;UBERON:0001383,2.66e-18,1;UBERON:0004357,2.66e-18,1;UBERON:0004347,2.66e-18,1;UBERON:0005420,2.66e-18,1;UBERON:0005732,2.66e-18,1;UBERON:0010758,2.66e-18,1;UBERON:0010707,2.66e-18,1;UBERON:0000978,2.66e-18,1;UBERON:0002103,2.66e-18,1;UBERON:0001665,2.66e-18,1;UBERON:0003823,2.66e-18,1;UBERON:0000154,2.66e-18,1;UBERON:0010709,2.66e-18,1;UBERON:0005733,2.66e-18,1;UBERON:0005730,2.66e-18,1;UBERON:0005090,7.98e-10,2;UBERON:0001630,7.98e-10,2;UBERON:0000341,1.33e-09,2;UBERON:0001723,7.28e-07,3;UBERON:0001033,7.28e-07,3;UBERON:0010056,7.28e-07,3;UBERON:0002240,8.62e-07,3;UBERON:0005174,8.62e-07,3;UBERON:0001137,8.62e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.387336002901508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,1.15741646340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28055318027145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,1.03423011972439,0,0,0.885741385813839,0.120596438625408,0,0.774054819518572,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0.573409195690071,0.332787154610557,0.0620964029413835,0,0,0,0,0,8.89836321033075,4.49255188693558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.630893960010027,0,0,0,0,0,0.478901577171454,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413373593002368,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3588613950063,1.43727929598746,1.1598144313382,0,1.16969731731053,0,0,0.67767649223376,0,0.150962843566674,0,0,0,0,0,0.588925401344836,1.18818560130834,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.426467963801962,1.1903221573187,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0.870866991587845,1.36893320434112,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p5@BEST3 | |||
}} |
Revision as of 14:36, 11 January 2014
Short description: | p5@BEST3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BEST3_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 0bp_to_ENST00000330891, NM_032735, uc001svd.1, uc001sve.1, uc001svg.2, uc001svh.2, uc001svi.1, uc010stm.1_5end |
EntrezGene: | BEST3 |
HGNC: | 17105 |
UniProt: | Q8N1M1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.56e-34 | 2 |
keratinocyte | 1.84e-14 | 5 |
stratified squamous epithelial cell | 3.26e-12 | 6 |
keratin accumulating cell | 3.26e-12 | 6 |
stratified epithelial cell | 3.26e-12 | 6 |
keratinizing barrier epithelial cell | 3.26e-12 | 6 |
epithelial fate stem cell | 3.26e-12 | 6 |
stratified epithelial stem cell | 3.26e-12 | 6 |
surface ectodermal cell | 3.26e-12 | 6 |
epidermal cell | 1.90e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 2.66e-18 | 1 |
soleus muscle | 2.66e-18 | 1 |
appendage | 2.66e-18 | 1 |
lower limb segment | 2.66e-18 | 1 |
multi-limb segment region | 2.66e-18 | 1 |
hindlimb muscle | 2.66e-18 | 1 |
hindlimb zeugopod muscle | 2.66e-18 | 1 |
paired limb/fin | 2.66e-18 | 1 |
limb | 2.66e-18 | 1 |
pelvic appendage | 2.66e-18 | 1 |
limb segment | 2.66e-18 | 1 |
paired limb/fin segment | 2.66e-18 | 1 |
limb muscle | 2.66e-18 | 1 |
pelvic complex muscle | 2.66e-18 | 1 |
zeugopod | 2.66e-18 | 1 |
muscle of leg | 2.66e-18 | 1 |
paired limb/fin bud | 2.66e-18 | 1 |
limb bud | 2.66e-18 | 1 |
pelvic appendage bud | 2.66e-18 | 1 |
limb/fin field | 2.66e-18 | 1 |
subdivision of organism along appendicular axis | 2.66e-18 | 1 |
appendage girdle complex | 2.66e-18 | 1 |
leg | 2.66e-18 | 1 |
hindlimb | 2.66e-18 | 1 |
triceps surae | 2.66e-18 | 1 |
hindlimb zeugopod | 2.66e-18 | 1 |
posterior region of body | 2.66e-18 | 1 |
pelvic complex | 2.66e-18 | 1 |
limb field | 2.66e-18 | 1 |
hindlimb/pelvic fin field | 2.66e-18 | 1 |
muscle structure | 7.98e-10 | 2 |
muscle organ | 7.98e-10 | 2 |
throat | 1.33e-09 | 2 |
tongue | 7.28e-07 | 3 |
gustatory system | 7.28e-07 | 3 |
future tongue | 7.28e-07 | 3 |
spinal cord | 8.62e-07 | 3 |
dorsal region element | 8.62e-07 | 3 |
dorsum | 8.62e-07 | 3 |