FFCP PHASE1:Hg19::chr12:109221160..109221178,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=54434 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30579 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WYL5 | |||
|association_with_transcript=148bp_to_AK095421_5end | |||
|description=CAGE_peak_11_at_SSH1_5end | |||
|id=chr12:109221160..109221178,- | |||
|ontology_enrichment_celltype=CL:0000055!1.30e-09!180;CL:0000148!9.90e-07!10;CL:0000541!9.90e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;6.79e-25;10!CL:0002567;8.52e-22;3!CL:0000147;6.71e-18;14!CL:0002591;1.65e-16;1!CL:0000710;1.24e-12;20!CL:0000075;1.97e-09;27!CL:0002262;6.42e-09;2!CL:1000398;6.42e-09;2!CL:0002077;7.59e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,7.23e-25,10;CL:0000541,7.23e-25,10;CL:0002567,7.68e-22,3;CL:0000147,7.01e-18,14;CL:0002591,2.63e-16,1;CL:0000710,1.28e-12,20;CL:0000075,2.02e-09,27;CL:0002262,6.94e-09,2;CL:1000398,6.94e-09,2;CL:0002077,1.57e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.76e-21;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.59e-31;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,8.57e-32,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.65e-16;1!UBERON:0002426;1.65e-16;1!UBERON:0003831;1.65e-16;1!UBERON:0003898;1.65e-16;1!UBERON:0004830;1.65e-16;1!UBERON:0003830;1.65e-16;1!UBERON:0005175;1.65e-16;1!UBERON:0001774;1.65e-16;1!UBERON:0001103;1.65e-16;1!UBERON:0002037;3.06e-11;6!UBERON:0001281;6.42e-09;2!UBERON:0003497;6.42e-09;2!UBERON:0003909;6.42e-09;2!UBERON:0005090;6.42e-09;2!UBERON:0001630;6.42e-09;2!UBERON:0000078;6.42e-09;2!UBERON:0003835;6.42e-09;2!UBERON:0002012;6.42e-09;2!UBERON:0008886;6.42e-09;2!UBERON:0002680;8.60e-08;9!UBERON:0001895;8.60e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.04e-16,1;UBERON:0003831,1.04e-16,1;UBERON:0003898,1.04e-16,1;UBERON:0004830,1.04e-16,1;UBERON:0003830,1.04e-16,1;UBERON:0005175,1.04e-16,1;UBERON:0001774,1.04e-16,1;UBERON:0001103,1.04e-16,1;UBERON:0010084,1.04e-16,1;UBERON:0007195,3.07e-16,1;UBERON:0002037,2.91e-11,6;UBERON:0006215,2.91e-11,6;UBERON:0005090,5.08e-09,2;UBERON:0001630,5.08e-09,2;UBERON:0001281,6.94e-09,2;UBERON:0003497,6.94e-09,2;UBERON:0003909,6.94e-09,2;UBERON:0003835,6.94e-09,2;UBERON:0000078,8.09e-09,2;UBERON:0007497,8.09e-09,2;UBERON:0003643,8.09e-09,2;UBERON:0003504,8.09e-09,2;UBERON:0003469,8.09e-09,2;UBERON:0003496,8.09e-09,2;UBERON:0002012,8.09e-09,2;UBERON:0008886,8.09e-09,2;UBERON:0007303,8.09e-09,2;UBERON:0002061,8.09e-09,2;UBERON:0005432,8.09e-09,2;UBERON:0004363,8.09e-09,2;UBERON:0002680,8.31e-08,9;UBERON:0001895,8.31e-08,9;UBERON:0010092,8.31e-08,9 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.529636723252875,0.573673241497627,0,0,0,0.49333509683432,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.226864366320042,0.179389635688862,0.427114777637135,0.423863802319124,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.380508304469197,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.761974731506028,3.81988425558278,3.51652341630141,0,0.308482478109971,1.20137223137567,1.42913216315289,0.224262168690721,0,0.2933531432838,0.258543431515556,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0.61384789315225,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0.307007349452259,0.137836572484531,0,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0,0,0.744316738719335,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0,0.430234056612155,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,1.52581736317083,3.42795705786796,0.886642856860642,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,1.60515529459758,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.310482014706917,0,0,1.81978941049977,2.28372266835974,0,0,0,0,0.233713309847224,0.554805861502613,0.378806010550178,0.251567901752575,0,0.228840068396924,0.302461847526478,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0.813741466409323,0.545545977607678,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0.173858272302579,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0.378499274505237,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p11@SSH1 | |||
}} |
Revision as of 15:46, 11 January 2014
Short description: | p11@SSH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SSH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 148bp_to_AK095421_5end |
EntrezGene: | SSH1 |
HGNC: | 30579 |
UniProt: | Q8WYL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 7.23e-25 | 10 |
melanoblast | 7.23e-25 | 10 |
light melanocyte | 7.68e-22 | 3 |
pigment cell | 7.01e-18 | 14 |
smooth muscle cell of the pulmonary artery | 2.63e-16 | 1 |
neurecto-epithelial cell | 1.28e-12 | 20 |
columnar/cuboidal epithelial cell | 2.02e-09 | 27 |
endothelial cell of sinusoid | 6.94e-09 | 2 |
endothelial cell of hepatic sinusoid | 6.94e-09 | 2 |
ecto-epithelial cell | 1.57e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
melanoma | 8.57e-32 | 2 |