FFCP PHASE1:Hg19::chr14:22336966..22337001,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010tmh.1_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_uc010tmh.1_5end | |||
|id=chr14:22336966..22337001,+ | |||
|ontology_enrichment_celltype=CL:0000791!9.06e-22!18;CL:0000789!9.06e-22!18;CL:0002420!9.06e-22!18;CL:0002419!9.06e-22!18;CL:0000790!9.06e-22!18;CL:0000738!1.07e-21!140;CL:0002087!1.05e-16!119;CL:0000625!1.02e-15!11;CL:0000084!1.46e-15!25;CL:0000827!1.46e-15!25;CL:0000037!4.29e-14!172;CL:0000566!4.29e-14!172;CL:0002031!1.86e-13!124;CL:0000988!2.47e-12!182;CL:0002032!6.79e-12!165;CL:0000837!6.79e-12!165;CL:0000838!2.69e-11!52;CL:0000542!6.23e-11!53;CL:0000051!6.23e-11!53;CL:0000624!2.53e-09!6;CL:0000766!5.16e-07!76;CL:0000990!9.04e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.95e-38;18!CL:0000789;1.95e-38;18!CL:0002419;1.95e-38;18!CL:0000625;4.72e-27;11!CL:0000084;2.77e-26;25!CL:0000624;1.58e-15;6!CL:0000898;5.16e-09;3!CL:0000226;6.18e-08;3!CL:0000842;6.18e-08;3!CL:0000623;9.19e-08;3!CL:0000542;1.32e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.84e-38,18;CL:0000789,1.84e-38,18;CL:0002420,1.84e-38,18;CL:0002419,1.84e-38,18;CL:0000790,1.84e-38,18;CL:0000625,4.50e-27,11;CL:0000084,2.66e-26,25;CL:0000827,2.66e-26,25;CL:0000624,1.56e-15,6;CL:0000838,1.35e-14,52;CL:0000542,3.22e-14,53;CL:0000051,3.22e-14,53;CL:0000738,9.86e-11,136;CL:0002087,3.42e-10,115;CL:0000898,5.10e-09,3;CL:0000226,6.33e-08,3;CL:0000842,6.33e-08,3;CL:0000623,9.31e-08,3;CL:0000825,9.31e-08,3;CL:0000037,3.28e-07,168;CL:0002031,4.45e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.95e-38;18!CL:0000051;1.32e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.33e-22!115;UBERON:0000178!4.61e-12!15;UBERON:0000179!4.61e-12!15;UBERON:0000463!4.61e-12!15;UBERON:0002390!3.29e-11!102;UBERON:0003061!3.29e-11!102;UBERON:0002193!1.17e-10!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.61e-21;15!UBERON:0000179;1.61e-21;15!UBERON:0000463;1.61e-21;15!UBERON:0002390;1.49e-14;32!UBERON:0002193;3.85e-10;42!UBERON:0004177;4.43e-08;5!UBERON:0005057;4.43e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.64e-21,15;UBERON:0000179,1.64e-21,15;UBERON:0000463,1.64e-21,15;UBERON:0004177,7.59e-09,7;UBERON:0005057,7.59e-09,7;UBERON:0003408,3.25e-08,10;UBERON:0002193,2.59e-07,108;UBERON:0007023,3.75e-07,114;UBERON:0002390,5.74e-07,98;UBERON:0003061,5.74e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,69.4731210555955,0.77408061658038,0,0,0,0,0,0,1.66198622559563,3.00816671205213,1.51907609501096,1.34349284543955,3.56283032620878,0.77272670290256,0,0.377875943688809,0,0,0.411167888021826,0,0.575384784644301,0.768482119587302,0,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.674170453335254,0,1.28371610830437,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0.622822248995575,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,2.24203425192614,0,24.785431034343,14.1483874589699,25.4945858759391,120.039903690507,65.5103755933517,68.1764840258016,74.0341567950063,119.766241151562,93.9792844844731,89.9427612009502,107.238330050946,61.6119247880498,50.3329675056729,98.3338669529983,75.4435548555366,154.465044696783,68.804965307196,71.7009419280431,66.9027352351851,108.776968989664,74.3447757587727,85.9068613706575,78.1830848340264,51.6075971205037,63.806178477929,41.8198899557285,155.995823364573,179.949175283112,52.4709051519853,50.9071091894636,41.0563998460523,24.9992361598668,19.7905744879795,11.4411279067411,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.0478326039817,0,0,0.649094787309367,0.348259474598534,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.07826116827902,10.5657511681163,6.80218092282666,0,0,0,0,0,0.749007023947182,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0903386645345,7.11856862701436,11.4198486849685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,24.3574852431441,16.0573813499899,13.1018853050057,50.9815999479668,53.4770955012052,25.290459136516,18.901100303334,20.621254583651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,9.94622095912132,0,0,0,0,0,0,0,1.1837208676432,21.5534783112246,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.23840590304675,1.83309043480088,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26085721434945,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9221734262185,0.628817220398664,1.24271716604159,4.46549419630756,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36402216187572,0.930053882193542,0.163565394255844,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,3.83780436800028,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,2.39239890134628,1.5299169235277,0,0.245148321753905,0,0.196308467114945,0,0,0,2.6315497034359,4.57651004612398,0,0,0,0,0,1.37618785021362,0.430018749454354,0,0.135982980381829,0,6.87734892670021,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.103432995861895,1.49263787330687,0.952257725854961,50.1855829425767,33.644495148355,0,0.0636471582781649,0,0.435433495793923,0,14.7500996101947,1.36272190246085,0,0,0,0,0,0,0.611207220914332,0,0,13.8878917577808,0 | |||
|short_description=p1@uc010tmh.1 | |||
}} |
Revision as of 19:04, 11 January 2014
Short description: | p1@uc010tmh.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc010tmh.1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_uc010tmh.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.84e-38 | 18 |
alpha-beta T cell | 1.84e-38 | 18 |
immature T cell | 1.84e-38 | 18 |
mature T cell | 1.84e-38 | 18 |
immature alpha-beta T cell | 1.84e-38 | 18 |
CD8-positive, alpha-beta T cell | 4.50e-27 | 11 |
T cell | 2.66e-26 | 25 |
pro-T cell | 2.66e-26 | 25 |
CD4-positive, alpha-beta T cell | 1.56e-15 | 6 |
lymphoid lineage restricted progenitor cell | 1.35e-14 | 52 |
lymphocyte | 3.22e-14 | 53 |
common lymphoid progenitor | 3.22e-14 | 53 |
leukocyte | 9.86e-11 | 136 |
nongranular leukocyte | 3.42e-10 | 115 |
naive T cell | 5.10e-09 | 3 |
single nucleate cell | 6.33e-08 | 3 |
mononuclear cell | 6.33e-08 | 3 |
natural killer cell | 9.31e-08 | 3 |
pro-NK cell | 9.31e-08 | 3 |
hematopoietic stem cell | 3.28e-07 | 168 |
hematopoietic lineage restricted progenitor cell | 4.45e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 1.64e-21 | 15 |
haemolymphatic fluid | 1.64e-21 | 15 |
organism substance | 1.64e-21 | 15 |
hemopoietic organ | 7.59e-09 | 7 |
immune organ | 7.59e-09 | 7 |
gland of gut | 3.25e-08 | 10 |
hemolymphoid system | 2.59e-07 | 108 |
adult organism | 3.75e-07 | 114 |
hematopoietic system | 5.74e-07 | 98 |
blood island | 5.74e-07 | 98 |