FFCP PHASE1:Hg19::chr14:39649701..39649729,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9162 | |||
|TSSclassifier=strong | |||
|UniProt=B4E392 | |||
|association_with_transcript=0bp_to_AK304622_5end | |||
|coexpression_cluster_id=C664 | |||
|description=CAGE_peak_12_at_PNN_5end | |||
|id=chr14:39649701..39649729,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,6.04e-08,161;CL:0000837,6.04e-08,161;CL:0000037,9.49e-08,168;CL:0000988,7.25e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.32e-26!235;DOID:14566!5.93e-25!239;DOID:2531!1.17e-13!51;DOID:0060083!1.17e-13!51;DOID:0050686!3.01e-13!137;DOID:0050687!1.95e-12!143;DOID:1240!9.49e-12!39;DOID:8692!6.64e-10!31;DOID:305!1.28e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.03e-08;31!DOID:1240;3.78e-08;39!DOID:2531;1.04e-07;51!DOID:0060083;1.04e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.64e-12,235;DOID:2531,2.14e-12,51;DOID:0060083,2.14e-12,51;DOID:14566,1.06e-11,239;DOID:1240,4.90e-11,39;DOID:8692,6.14e-09,31;DOID:0050686,8.53e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.88e-07,53;UBERON:0002616,6.88e-07,53;UBERON:0001049,7.18e-07,56;UBERON:0005068,7.18e-07,56;UBERON:0006241,7.18e-07,56;UBERON:0007135,7.18e-07,56 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0.218441372130172,0,0,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0,0,0,0,1.64249310087461,1.25542639594803,0.993374274723366,1.47781061009902,1.18066171970519,0.393364276848904,0,0,0,0,0,1.54934401160603,2.13253848731132,0.293600439334847,0,4.41197784434312,2.38711957787437,0.447830948479849,0,0,1.16318591023652,1.13362783106643,1.69808842831471,0.464858073811369,2.46700732813095,0.929119112685311,0,0.512321413058201,0.236482229888585,1.03423704220986,1.93645405075148,0,2.07066573496865,1.36453075028923,0.674170453335254,2.14258724659632,0,0.639337125799041,0,0.997318288108159,0.426224750532694,0.580418477257168,0,2.4912889959823,0.75374599577023,1.0429658368404,0.434377689410233,2.42159801053347,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.336985893439485,0.450530678524519,0.64290234678832,0,0,0,0,0.546138611262131,0,0,0,0,0,0,1.70763890732835,2.34894875748376,3.44045905312706,1.32171328579026,0,0,1.7703879310245,2.35806457649499,2.2616164889946,0.501559486172034,0,0,0,0.222820913770347,0,0.221533894583621,0.812411591295047,0.640456598628376,0.390178042679635,0.986627427622057,0.552700035571697,1.15921234294021,1.18629250529648,0.802622484269139,1.04535523804977,0.339928028092699,0.383220493601921,0.68725489096526,2.53019692019503,0,0,0,0,0.255973222308837,0,0,0,1.00803371612366,2.13952156626806,2.89648807765598,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0.443458794925128,0.87834785693126,0.0654895377488563,0,0.370784442784429,0,0.174129737299267,0.398873881556595,0.476981248610684,0,0.371457501329565,0.198762407366705,0,0,0,0.419499436209906,0.550236083880135,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.450445921933289,0,0,0,0,3.87780264148325,0,0,0.25326102332916,0.662045904066094,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0,0.326923806226917,0,0,0.234321431833797,0,0,0.747243402759005,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.859840221182376,0.103325781175765,0,0.494533858557114,0,0,0.336672227908132,0.375355559615893,0.554128230968366,0,0,0,0,2.33206526395521,0.427114777637135,0.423863802319124,0.300091096084402,0.412210116953756,0.515281080091258,0,0.843881661206331,0.194874010322397,0.757301322732344,0.0920498986422993,0,1.77504796258307,0.10075209822764,0,0,0,0,3.04934265323988,2.91565490307268,1.39432731443422,1.96956004529204,2.77552935963191,1.82488679537915,0,0,0,0,0.721879481669586,0.473227200159376,0.842923450390509,0.723033089650446,0.220587945464788,0.871517776369625,0.71181185733329,0.674156540800822,0.588664395376038,0.769494313892781,0,0,0,0,2.53510069643662,2.94848165003288,2.95394953340702,2.20731549707325,0.245976877086227,0,0.109750285408626,0,1.10581869652794,0.370353780634118,0,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0,0.445893486866185,0,0.16798212819886,0.425325291727159,0.53735113621709,0.581267877027924,0,2.46331618947972,0.528290604079356,0.414656231081544,0.288239906833923,0.25248486685276,0.190493682876507,0,1.17217447210047,0,0.719792448923265,0,0,0.224262168690721,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0.428933980974443,0,0,0,0,0,0.602878754119172,0,1.09970290300263,0,1.00451418286425,2.10833939483032,0,1.14861935834114,0,0,1.64381058040307,0,1.12085143993527,0.394061520403854,1.94064817373566,3.85029108839245,0.76228387266739,0,0,0,0,2.24702107184155,2.99161459204025,0.414415513436035,0.24538298343828,0.500170521059677,0,0.623912584592421,0.713715955188647,1.10391690523754,0.937131319941706,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,1.03384013061444,0.862856803274467,0.74709290462411,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.256278298511402,0.511707249066704,1.12597744800525,0,0.308419387605311,0.355123450626254,0.0821271560138091,0.519254429183621,0.232420756919918,0.604297247958111,0.40101294060657,1.19705285616665,0.459257792658427,0.910455840033585,0.131124414959424,0,0.0770153371044148,0,0,0.316654886678627,0,0,1.0795795805107,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,2.38080608527693,0.742585499285292,0,0,0,0.290012154876366,0,0.460511024178389,0.551346289938122,0,0.435050081742686,0.340906509664404,0.267096106940212,0,0.192190067365106,1.02090169995667,0.4046311234222,0,0.62962469366128,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0,0,0,0,0.48763373908959,0.487426979262569,0,0.136499911407986,0.565621727814851,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0,0,0.658589785919804,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0.648473311192717,1.08006287447623,0,1.28188885352968,3.84991942105343,1.71528151186722,1.85803175125719,1.15415370381156,0.995985806877798,2.07254154547469,3.99158742865633,0.57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| |||
|short_description=p12@PNN | |||
}} |
Revision as of 19:52, 11 January 2014
Short description: | p12@PNN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PNN_5end |
Coexpression cluster: | C664_medulloblastoma_acute_diffuse_small_gall_neuroectodermal_gastrointestinal |
Association with transcript: | 0bp_to_AK304622_5end |
EntrezGene: | PNN |
HGNC: | 9162 |
UniProt: | B4E392 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 6.04e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.04e-08 | 161 |
hematopoietic stem cell | 9.49e-08 | 168 |
hematopoietic cell | 7.25e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 6.88e-07 | 53 |
regional part of brain | 6.88e-07 | 53 |
neural tube | 7.18e-07 | 56 |
neural rod | 7.18e-07 | 56 |
future spinal cord | 7.18e-07 | 56 |
neural keel | 7.18e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.64e-12 | 235 |
hematologic cancer | 2.14e-12 | 51 |
immune system cancer | 2.14e-12 | 51 |
disease of cellular proliferation | 1.06e-11 | 239 |
leukemia | 4.90e-11 | 39 |
myeloid leukemia | 6.14e-09 | 31 |
organ system cancer | 8.53e-07 | 137 |