FFCP PHASE1:Hg19::chr14:103523723..103523743,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9578 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1738 | |||
|TSSclassifier=strong | |||
|UniProt=Q86XZ8,Q9Y5S2 | |||
|association_with_transcript=0bp_to_NM_006035,uc001ymi.1_5end | |||
|description=CAGE_peak_2_at_CDC42BPB_5end | |||
|id=chr14:103523723..103523743,- | |||
|ontology_enrichment_celltype=CL:0000222!1.93e-13!119;CL:0000220!2.51e-13!246;CL:0002321!1.00e-12!248;CL:0002139!7.40e-12!24;CL:0000066!2.19e-11!254;CL:0002078!5.37e-11!44;CL:0000071!1.25e-10!18;CL:0002546!1.25e-10!18;CL:0000115!2.50e-10!35;CL:0000057!7.74e-10!75;CL:0000055!1.04e-09!180;CL:0000213!5.46e-08!57;CL:0000215!5.46e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.23e-12;24!CL:0000071;1.09e-10;18!CL:0000115;2.45e-09;36!CL:0002078;3.57e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.38e-13,121;CL:0002321,1.58e-12,250;CL:0002139,6.70e-12,24;CL:0002078,1.78e-11,45;CL:0000066,2.50e-11,253;CL:0000115,8.12e-11,36;CL:0000071,1.15e-10,18;CL:0002546,1.15e-10,18;CL:0000057,3.23e-10,76;CL:0000213,2.50e-08,58;CL:0000215,2.50e-08,58 | |||
|ontology_enrichment_development_v019=CL:0002546;1.09e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.77e-20!118;UBERON:0004111!1.01e-18!241;UBERON:0000477!1.52e-17!286;UBERON:0000055!7.29e-17!69;UBERON:0000468!2.19e-16!659;UBERON:0004872!3.26e-16!84;UBERON:0000467!5.32e-16!625;UBERON:0000480!7.54e-16!626;UBERON:0000475!7.63e-16!365;UBERON:0002049!1.58e-15!79;UBERON:0007798!1.58e-15!79;UBERON:0001981!1.92e-15!60;UBERON:0007500!1.92e-15!60;UBERON:0004537!1.92e-15!60;UBERON:0006965!1.92e-15!60;UBERON:0002100!2.48e-15!216;UBERON:0000119!6.49e-15!312;UBERON:0000483!1.01e-14!309;UBERON:0000025!1.48e-13!194;UBERON:0000481!5.21e-13!347;UBERON:0003104!1.37e-11!238;UBERON:0009142!1.37e-11!238;UBERON:0009569!6.76e-11!113;UBERON:0001637!6.77e-11!42;UBERON:0003509!6.77e-11!42;UBERON:0004572!6.77e-11!42;UBERON:0001986!1.25e-10!18;UBERON:0004638!1.25e-10!18;UBERON:0004852!1.25e-10!18;UBERON:0000490!1.83e-10!138;UBERON:0005256!2.03e-10!143;UBERON:0000487!1.19e-09!22;UBERON:0002050!1.20e-09!605;UBERON:0005423!1.20e-09!605;UBERON:0000923!1.76e-09!604;UBERON:0005291!1.76e-09!604;UBERON:0006598!1.76e-09!604;UBERON:0002532!1.76e-09!604;UBERON:0006914!1.87e-09!25;UBERON:0001009!3.04e-09!113;UBERON:0004535!3.75e-09!110;UBERON:0000466!9.56e-09!126;UBERON:0000922!1.33e-08!612;UBERON:0004119!1.54e-08!169;UBERON:0000925!1.54e-08!169;UBERON:0006595!1.54e-08!169;UBERON:0004573!2.53e-08!33;UBERON:0004571!2.53e-08!33;UBERON:0003103!1.57e-07!69;UBERON:0002417!1.88e-07!61;UBERON:0000916!1.88e-07!61;UBERON:0000926!2.46e-07!448;UBERON:0004120!2.46e-07!448;UBERON:0006603!2.46e-07!448;UBERON:0000062!6.97e-07!511;UBERON:0001007!8.36e-07!155;UBERON:0001555!8.36e-07!155;UBERON:0007026!8.36e-07!155;UBERON:0000464!8.42e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.09e-10;18!UBERON:0001986;1.09e-10;18!UBERON:0004852;1.09e-10;18!UBERON:0000487;9.27e-10;22!UBERON:0006914;1.30e-09;25!UBERON:0001637;1.38e-08;42!UBERON:0003509;1.38e-08;42!UBERON:0004572;1.38e-08;42!UBERON:0000055;1.64e-08;65!UBERON:0003914;2.37e-08;74!UBERON:0007500;4.82e-08;56!UBERON:0001981;4.82e-08;56!UBERON:0004537;4.82e-08;56!UBERON:0004573;1.10e-07;33!UBERON:0004571;1.10e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.06e-20,117;UBERON:0004111,2.22e-18,240;UBERON:0000055,2.44e-16,68;UBERON:0004872,1.01e-15,83;UBERON:0002049,4.93e-15,78;UBERON:0007798,4.93e-15,78;UBERON:0007500,6.55e-15,59;UBERON:0001981,6.55e-15,59;UBERON:0004537,6.55e-15,59;UBERON:0006965,6.55e-15,59;UBERON:0000119,1.69e-14,309;UBERON:0000483,2.62e-14,306;UBERON:0002100,2.73e-14,199;UBERON:0000025,2.50e-13,192;UBERON:0001637,7.27e-11,42;UBERON:0003509,7.27e-11,42;UBERON:0004572,7.27e-11,42;UBERON:0009569,7.79e-11,112;UBERON:0004638,1.15e-10,18;UBERON:0001986,1.15e-10,18;UBERON:0004852,1.15e-10,18;UBERON:0000490,8.27e-10,148;UBERON:0000487,1.10e-09,22;UBERON:0006914,1.73e-09,25;UBERON:0003104,1.78e-09,160;UBERON:0009142,1.78e-09,160;UBERON:0001009,6.66e-09,112;UBERON:0004535,8.25e-09,109;UBERON:0004573,2.77e-08,33;UBERON:0004571,2.77e-08,33;UBERON:0005256,4.17e-08,122;UBERON:0004119,5.34e-08,160;UBERON:0000925,5.34e-08,160;UBERON:0006595,5.34e-08,160;UBERON:0003103,1.01e-07,68;UBERON:0002417,1.18e-07,60;UBERON:0000916,1.18e-07,60;UBERON:0005423,4.32e-07,581 | |||
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| |||
|short_description=p2@CDC42BPB | |||
}} |
Revision as of 22:06, 11 January 2014
Short description: | p2@CDC42BPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDC42BPB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_006035, uc001ymi.1_5end |
EntrezGene: | CDC42BPB |
HGNC: | 1738 |
UniProt: | Q86XZ8Q9Y5S2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.38e-13 | 121 |
embryonic cell | 1.58e-12 | 250 |
endothelial cell of vascular tree | 6.70e-12 | 24 |
meso-epithelial cell | 1.78e-11 | 45 |
epithelial cell | 2.50e-11 | 253 |
endothelial cell | 8.12e-11 | 36 |
blood vessel endothelial cell | 1.15e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.15e-10 | 18 |
fibroblast | 3.23e-10 | 76 |
lining cell | 2.50e-08 | 58 |
barrier cell | 2.50e-08 | 58 |