FFCP PHASE1:Hg19::chr15:39873010..39873030,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:39873010..39873030,- | |||
|id=chr15:39873010..39873030,- | |||
|ontology_enrichment_celltype=CL:0002057!7.25e-22!42;CL:0000860!2.15e-19!45;CL:0002371!5.94e-13!591;CL:0000115!8.13e-13!35;CL:0000144!2.01e-12!625;CL:0002139!3.25e-11!24;CL:0002194!3.51e-10!63;CL:0000576!3.51e-10!63;CL:0000040!3.51e-10!63;CL:0000559!3.51e-10!63;CL:0000222!6.04e-10!119;CL:0002009!1.71e-09!65;CL:0000048!3.19e-09!430;CL:0000071!3.39e-09!18;CL:0002546!3.39e-09!18;CL:0000012!3.81e-09!682;CL:0002078!6.12e-09!44;CL:0000723!8.39e-09!436;CL:0000034!9.02e-09!444;CL:0000213!1.29e-08!57;CL:0000215!1.29e-08!57;CL:0000766!1.35e-08!76;CL:0000548!1.90e-08!679;CL:0000004!1.90e-08!679;CL:0000255!1.90e-08!679;CL:0000055!4.88e-08!180;CL:0000839!5.54e-08!70;CL:0000557!1.03e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.85e-20;33!CL:0002057;1.85e-20;33!CL:0000576;1.43e-17;48!CL:0000473;7.12e-17;39!CL:0000234;7.12e-17;39!CL:0002393;2.84e-15;6!CL:0002397;2.84e-15;6!CL:0000766;2.43e-11;69!CL:0000226;3.63e-11;3!CL:0000842;3.63e-11;3!CL:0000071;5.18e-11;18!CL:0002139;6.20e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.21e-32,42;CL:0002057,1.21e-32,42;CL:0000473,7.18e-28,48;CL:0000234,7.18e-28,48;CL:0002194,3.35e-21,59;CL:0000576,3.35e-21,59;CL:0000040,3.35e-21,59;CL:0000559,3.35e-21,59;CL:0002009,2.42e-20,61;CL:0000766,3.06e-20,72;CL:0000839,2.02e-18,66;CL:0000557,4.51e-18,67;CL:0002087,9.77e-12,115;CL:0000763,1.19e-11,108;CL:0000049,1.19e-11,108;CL:0000738,4.05e-11,136;CL:0000226,4.44e-11,3;CL:0000842,4.44e-11,3;CL:0000071,5.19e-11,18;CL:0002546,5.19e-11,18;CL:0002393,4.28e-10,9;CL:0002397,4.28e-10,9;CL:0002139,6.20e-08,24;CL:0002031,6.21e-08,120;CL:0000037,7.28e-08,168;CL:0000115,1.05e-07,36;CL:0000988,3.58e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.12e-25;42!CL:0002546;5.18e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.31e-15!216;UBERON:0002049!7.84e-13!79;UBERON:0007798!7.84e-13!79;UBERON:0004535!5.03e-12!110;UBERON:0001009!3.32e-11!113;UBERON:0000055!7.76e-11!69;UBERON:0004872!9.34e-11!84;UBERON:0001981!4.54e-10!60;UBERON:0007500!4.54e-10!60;UBERON:0004537!4.54e-10!60;UBERON:0006965!4.54e-10!60;UBERON:0001986!3.39e-09!18;UBERON:0004638!3.39e-09!18;UBERON:0004852!3.39e-09!18;UBERON:0000467!8.34e-09!625;UBERON:0000926!9.16e-09!448;UBERON:0004120!9.16e-09!448;UBERON:0006603!9.16e-09!448;UBERON:0000480!1.06e-08!626;UBERON:0002204!4.94e-08!167;UBERON:0003914!7.43e-08!118;UBERON:0000468!3.42e-07!659;UBERON:0002193!7.80e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.18e-11;18!UBERON:0001986;5.18e-11;18!UBERON:0004852;5.18e-11;18!UBERON:0000487;8.99e-09;22!UBERON:0006914;1.45e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.55e-19,203;UBERON:0002371,2.44e-15,76;UBERON:0002390,9.13e-15,98;UBERON:0003061,9.13e-15,98;UBERON:0001474,7.50e-14,82;UBERON:0002193,7.25e-13,108;UBERON:0004765,3.52e-12,90;UBERON:0002405,1.26e-11,93;UBERON:0000926,1.32e-11,315;UBERON:0004120,1.32e-11,315;UBERON:0006603,1.32e-11,315;UBERON:0004638,5.19e-11,18;UBERON:0001986,5.19e-11,18;UBERON:0004852,5.19e-11,18;UBERON:0001434,1.80e-10,100;UBERON:0000487,9.00e-09,22;UBERON:0006914,1.45e-07,25 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0.331397375727916,0,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.502170558379211,0,0,0,1.18009283054671,0.767658796194425,3.56077083626975,0,0.30120591877825,0,0,0,0,8.30993112797816,15.2413780077308,1.95309783644267,0,0,0,0.290796477559129,0,0,2.09186133215116,0.822335776043652,0.309706370895104,3.45230870786581,1.0246428261164,0.47296445977717,2.41321976515633,1.29096936716765,1.35426486594342,1.50593871634084,0.272906150057846,0.449446968890169,0.918251677112708,0,0.639337125799041,2.30895910130701,0.398927315243264,0.852449501065388,5.22376629531451,1.70215567407342,1.86846674698672,2.26123798731069,2.08593167368081,0.65156653411535,1.21079900526674,0.368277635987565,0,1.05627643155971,2.33864729961548,0.209658645508376,2.80821577866238,1.50176892841506,0.48217676009124,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,1.34140171940727,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,1.19257444420023,1.72046919021225,0,1.13061588384802,0.419499436209906,0.550236083880135,1.25396979922086,0.775250277507987,0,0.33472061276467,0.805658634218294,1.52054421143703,1.95249646038536,0,0,0.446498641420399,0.22452937262617,0.337834441449967,6.13266549863533,0.949265659568129,1.09921046358244,0,0,0.436094052142534,0,0.12663051166458,0.926864265692532,1.43418310374407,0.354668382198357,1.12135520028461,2.1349799145941,0.74000264525148,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0,0.570471821544449,0,0,0.323745888736263,0,0.204154171254893,0,0.206651562351531,0,0.741800787835671,0,0,0,0,0,0,0.612975591598039,0.901428353439581,0.340296549480063,1.97328599257748,0.640672166455702,0.211931901159562,0,0.309157587715317,0.772921620136887,0.558350568994769,0.675105328965065,0.292311015483596,1.26216887122057,0.184099797284599,0.161646056818812,0.710019185033229,0.201504196455281,0.67824236924195,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,8.28809528114883,0,0.721879481669586,0,0,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.288732895522148,0.925971025153221,0.570762456703795,0,0,0,0,0.148631162288728,0,0.335964256397719,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0.257207374262142,0,0,0.57191197463259,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.112085143993527,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0.819989904948992,0.601892199455438,0,1.03473071292505,0,2.02806085395873,0.260650843404249,0,0,1.44737618286021,2.37285620900479,1.06727557803444,2.42502057157008,0,0.30239029332968,0.248107807818777,0.61384789315225,0,0.128139149255701,0,0.160853921143607,0,0,0.355123450626254,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,1.13733384070897,0.340187410553031,0.431831832204279,4.62681758070868,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0.638063562472921,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0.286249773483982,0.744316738719335,0.316379424718726,0,0,0,1.27281299170375,0.78494864019923,0,0,0.471249609382746,0.404364963146632,0,0,0.48763373908959,0,2.11300293513511,0,0,0,0,0.66343897524122,0.876901770507525,0,0.655894752046633,0.405820753925408,0.30982349809975,0.563391205064483,0,0,0.7133421029625,0,0.211107635297664,0,0.379473173765715,0.699869440489966,0,2.01090682660736,2.17781969722645,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0.890894042497916,0.307160702099232,0.994147647766298,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.393709926058995,0,0,0,0.321506296930038,0.412618309791701,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,1.53172788381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| |||
|short_description=p@chr15:39873010..39873030,- | |||
}} |
Revision as of 22:53, 11 January 2014
Short description: | p@chr15:39873010..39873030, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39873010..39873030, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.21e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.21e-32 | 42 |
defensive cell | 7.18e-28 | 48 |
phagocyte | 7.18e-28 | 48 |
monopoietic cell | 3.35e-21 | 59 |
monocyte | 3.35e-21 | 59 |
monoblast | 3.35e-21 | 59 |
promonocyte | 3.35e-21 | 59 |
macrophage dendritic cell progenitor | 2.42e-20 | 61 |
myeloid leukocyte | 3.06e-20 | 72 |
myeloid lineage restricted progenitor cell | 2.02e-18 | 66 |
granulocyte monocyte progenitor cell | 4.51e-18 | 67 |
nongranular leukocyte | 9.77e-12 | 115 |
myeloid cell | 1.19e-11 | 108 |
common myeloid progenitor | 1.19e-11 | 108 |
leukocyte | 4.05e-11 | 136 |
single nucleate cell | 4.44e-11 | 3 |
mononuclear cell | 4.44e-11 | 3 |
blood vessel endothelial cell | 5.19e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.19e-11 | 18 |
intermediate monocyte | 4.28e-10 | 9 |
CD14-positive, CD16-positive monocyte | 4.28e-10 | 9 |
endothelial cell of vascular tree | 6.20e-08 | 24 |
hematopoietic lineage restricted progenitor cell | 6.21e-08 | 120 |
hematopoietic stem cell | 7.28e-08 | 168 |
endothelial cell | 1.05e-07 | 36 |
hematopoietic cell | 3.58e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.55e-19 | 203 |
bone marrow | 2.44e-15 | 76 |
hematopoietic system | 9.13e-15 | 98 |
blood island | 9.13e-15 | 98 |
bone element | 7.50e-14 | 82 |
hemolymphoid system | 7.25e-13 | 108 |
skeletal element | 3.52e-12 | 90 |
immune system | 1.26e-11 | 93 |
mesoderm | 1.32e-11 | 315 |
mesoderm-derived structure | 1.32e-11 | 315 |
presumptive mesoderm | 1.32e-11 | 315 |
blood vessel endothelium | 5.19e-11 | 18 |
endothelium | 5.19e-11 | 18 |
cardiovascular system endothelium | 5.19e-11 | 18 |
skeletal system | 1.80e-10 | 100 |
simple squamous epithelium | 9.00e-09 | 22 |
squamous epithelium | 1.45e-07 | 25 |