FFCP PHASE1:Hg19::chr15:39880753..39880767,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-33bp_to_uc010bbi.2_5end | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_9_at_THBS1_5end | |||
|id=chr15:39880753..39880767,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.27e-20!591;CL:0000055!2.49e-20!180;CL:0000057!1.20e-19!75;CL:0000144!3.79e-18!625;CL:0000548!5.47e-16!679;CL:0000004!5.47e-16!679;CL:0000255!5.47e-16!679;CL:0000012!3.18e-15!682;CL:0000222!3.29e-14!119;CL:0000220!6.96e-14!246;CL:0002321!1.01e-13!248;CL:0002139!2.34e-09!24;CL:0000115!3.31e-09!35;CL:0000063!6.48e-09!578;CL:0002078!1.74e-08!44;CL:0000003!2.01e-08!722;CL:0002620!5.25e-08!23;CL:0000213!5.95e-08!57;CL:0000215!5.95e-08!57;CL:0002334!8.45e-08!12;CL:0000723!1.11e-07!436;CL:0000680!3.30e-07!57;CL:0000056!3.30e-07!57;CL:0000355!3.30e-07!57;CL:0000192!3.55e-07!42;CL:0000514!3.55e-07!42;CL:0000048!4.12e-07!430;CL:0000071!6.91e-07!18;CL:0002546!6.91e-07!18;CL:0000034!7.38e-07!444;CL:0000183!9.94e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.16e-10;24!CL:0000115;8.93e-10;36!CL:0002334;3.44e-09;12!CL:0000071;1.09e-07;18!CL:0002078;3.94e-07;45!CL:0000349;6.84e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.60e-17,76;CL:0000222,1.17e-12,121;CL:0000115,1.90e-11,36;CL:0002139,9.34e-11,24;CL:0000723,2.25e-10,433;CL:0002078,2.54e-10,45;CL:0002321,7.22e-10,250;CL:0000048,1.18e-09,427;CL:0000034,2.77e-09,441;CL:0002334,3.01e-09,12;CL:0000213,1.22e-08,58;CL:0000215,1.22e-08,58;CL:0000071,9.73e-08,18;CL:0002546,9.73e-08,18;CL:0000349,7.29e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002546;1.09e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!8.37e-17!84;UBERON:0000055!1.31e-16!69;UBERON:0002049!2.65e-16!79;UBERON:0007798!2.65e-16!79;UBERON:0000468!7.37e-15!659;UBERON:0004535!9.98e-15!110;UBERON:0001009!1.66e-14!113;UBERON:0001981!3.71e-14!60;UBERON:0007500!3.71e-14!60;UBERON:0004537!3.71e-14!60;UBERON:0006965!3.71e-14!60;UBERON:0000467!7.19e-14!625;UBERON:0000480!7.56e-14!626;UBERON:0003102!4.70e-13!95;UBERON:0003914!1.07e-12!118;UBERON:0000926!3.86e-12!448;UBERON:0004120!3.86e-12!448;UBERON:0006603!3.86e-12!448;UBERON:0001637!2.57e-11!42;UBERON:0003509!2.57e-11!42;UBERON:0004572!2.57e-11!42;UBERON:0002199!3.49e-09!45;UBERON:0002416!3.49e-09!45;UBERON:0000490!4.91e-09!138;UBERON:0003081!1.06e-08!216;UBERON:0005256!1.25e-08!143;UBERON:0000486!1.55e-08!82;UBERON:0000914!1.67e-08!83;UBERON:0002329!1.67e-08!83;UBERON:0003077!1.67e-08!83;UBERON:0003059!1.67e-08!83;UBERON:0007282!1.67e-08!83;UBERON:0009618!1.67e-08!83;UBERON:0007285!1.67e-08!83;UBERON:0002097!1.70e-08!40;UBERON:0004573!6.69e-08!33;UBERON:0004571!6.69e-08!33;UBERON:0004923!6.71e-08!57;UBERON:0002100!2.75e-07!216;UBERON:0004290!6.82e-07!70;UBERON:0001986!6.91e-07!18;UBERON:0004638!6.91e-07!18;UBERON:0004852!6.91e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.43e-10;42!UBERON:0003509;5.43e-10;42!UBERON:0004572;5.43e-10;42!UBERON:0000055;2.03e-09;65!UBERON:0007500;2.55e-09;56!UBERON:0001981;2.55e-09;56!UBERON:0004537;2.55e-09;56!UBERON:0004573;3.86e-08;33!UBERON:0004571;3.86e-08;33!UBERON:0000487;9.97e-08;22!UBERON:0004638;1.09e-07;18!UBERON:0001986;1.09e-07;18!UBERON:0004852;1.09e-07;18!UBERON:0006914;1.38e-07;25!UBERON:0002049;3.60e-07;75!UBERON:0007798;3.60e-07;75!UBERON:0003914;5.66e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.93e-18,68;UBERON:0004872,3.52e-17,83;UBERON:0002049,4.91e-16,78;UBERON:0007798,4.91e-16,78;UBERON:0007500,2.10e-15,59;UBERON:0001981,2.10e-15,59;UBERON:0004537,2.10e-15,59;UBERON:0006965,2.10e-15,59;UBERON:0004535,6.16e-14,109;UBERON:0001009,6.89e-14,112;UBERON:0003914,3.68e-13,117;UBERON:0001637,2.62e-12,42;UBERON:0003509,2.62e-12,42;UBERON:0004572,2.62e-12,42;UBERON:0003081,3.98e-12,203;UBERON:0000926,8.51e-12,315;UBERON:0004120,8.51e-12,315;UBERON:0006603,8.51e-12,315;UBERON:0003102,8.17e-11,99;UBERON:0002199,1.23e-08,46;UBERON:0002416,1.23e-08,46;UBERON:0004573,3.13e-08,33;UBERON:0004571,3.13e-08,33;UBERON:0004923,5.40e-08,66;UBERON:0004638,9.73e-08,18;UBERON:0001986,9.73e-08,18;UBERON:0004852,9.73e-08,18;UBERON:0000487,1.01e-07,22;UBERON:0006914,1.10e-07,25;UBERON:0002097,1.30e-07,41 | |||
|phase1_expression=32.8837866479708,128.46031433459,24.526066312699,54.0395811106904,21.0071714380825,43.6169262050184,5.06599756336621,1.26343974685366,0,2.7030733015166,2.09340350391728,6.334799791775,14.7709507807934,0.866364470720326,1.65698687863958,22.8590549793604,25.313170177007,15.3365118981348,13.6621183661342,0.246242116153576,2.24400760368678,0.940364164434263,0,1.50561867580173,2.25976751270645,0,0,0,0,0,0.309632246632152,1.83884244895785,2.409647350226,0.739508020333575,0,0,0,0,7.42014455639524,0,0,0.32389366601898,0,5.67053131240302,0.377875943688809,0,17.8970358417377,1.6446715520873,0.309706370895104,32.2215479400809,2.81776777182011,2.60130452877444,17.5820297175675,1.29096936716765,0,15.6241141820362,2.18324920046277,0.674170453335254,25.098879174414,2.24650318953266,3.83602275479425,9.56568770541477,1.39624560335142,1.70489900213078,50.206198282745,5.10646702222026,5.60540024096017,16.8336605722018,4.69334626578181,1.08594422352558,33.9023721474687,2.20966581592539,0.949387162322653,0,0,0,0.336985893439485,1.20141514273205,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,4.73091478821062,3.2529523714611,4.51204119572301,7.53201898596283,0.795285947051099,7.29952305453954,0.756278537312543,1.10864698731282,0.87834785693126,0.261958150995425,0.364295288292542,2.59549109949101,0,0,0.132957960518865,0,0,0,2.58391129576717,0.860234595106124,6.94281003215189,2.26123176769604,19.2969740656557,49.7963655911522,18.1825620887025,3.87625138753993,3.91342888955381,7.36385348082274,12.0848795132744,6.0821768457481,21.9655851793353,12.8682078121054,79.3939108924124,13.5735586991801,3.59246996201872,3.0405099730497,0,2.84779697870439,5.31285057398181,0,0,2.61656431285521,49.6971951695319,16.9684885630537,13.902963985388,16.3496873826824,4.965357350777,3.92474320099615,4.2699598291882,53.2801904581065,1.8672662123986,1.88594940897563,5.06731899651722,0.454072282934794,1.15235184896,0,0.312160076830321,0.570471821544449,0.896692083310806,0.939475989150119,0.647491777472526,0.702254033511242,2.65400422631361,1.96534907698829,4.23635702820638,10.6920257155385,48.4643181385971,1.82032272387605,2.15585442544872,0.336672227908132,0.875829639103749,0.554128230968366,11.4134181429018,43.2147792076618,15.3242820084729,2.49550802952046,105.301716149362,22.4235258259496,19.0738711043606,27.9084719358494,22.2593463155028,39.1613620869356,16.1921665008483,21.4345941946408,27.8669834761028,30.2920529092937,14.3597841881987,15.8413135682436,44.7312086570934,12.3925080819998,9.15627198476633,1.35282597214308,3.00020732649918,2.00763216772303,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0,0,26.5964204960687,88.1240085324253,6.90674606762403,19.9678209053751,6.49691533502627,1.41968160047813,1.68584690078102,0.723033089650446,1.7647035637183,1.74303555273925,2.13543557199987,1.75280700608214,0.784885860501384,1.15424147083917,5.90524363699719,12.6217596423101,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0.368965315629341,1.02940686179115,10.2067765430022,3.37205259772859,6.53438320675601,6.85154494173119,0.325808305310325,1.03993478527958,0,0.115930404975077,0.587043471179108,12.5598809552134,18.5194205030644,24.3525314860286,0,0,0,0,0,1.87467667973554,15.9583021788917,5.95455408418023,2.95543124919399,8.4283842169049,6.9008882249738,0,0,0,0,0,0.190493682876507,0,0,0,2.26220483947312,0,0,0.112131084345361,0.43596006883328,0.22001485746285,2.06834745212444,0,0,11.7012771297343,18.7213386440459,0.514414748524284,0,1.8649552531127,1.71573592389777,0,1.64648067356154,0,1.06617584622764,0.791951872933429,0,0,0.299918973546171,0,0,0,5.99062138728957,10.3375742250703,0,2.89562613335158,5.13690806375959,1.25342674267927,0,0,0,0,0.254094624222463,0,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,1.59498939234882,1.50051156317903,0,43.0499683368771,97.4222278832503,58.1921911475219,45.9194346771436,3.61135319673263,13.6444502433591,5.17365356462525,3.98535359121262,2.02806085395873,11.1211026519146,0.587403472388222,1.02943027143257,0,0.215714200818617,0.426910231213777,2.12189300012382,9.98612637062982,14.212343786495,22.0815948958711,82.1021557091134,117.315919473025,17.555063448031,30.1907276949355,45.8433675259281,19.2943486378488,22.6688249889904,19.1766663338177,1.8067974323038,14.5391240171414,4.88083589531829,0.241718899183244,31.2790093673124,1.93370076765382,2.87036120411517,2.36718518408732,6.16284750309293,0,0,0,0,0.633309773357254,6.8240030442538,9.86543490603791,6.0456456508599,63.2331736030186,0,2.00675909541941,0.254876273045038,1.66215201785745,1.34324852833307,0,0,0.769350375349168,0,0.650756789328606,0.206082023295445,0.366277859273374,0.082509499920588,9.18824860793876,30.5528315637165,6.42735719376638,0.096670718292122,0.462145851343933,0.767518373630648,1.92971201478343,0.537101224341368,2.17525040871343,1.27839941124151,0.445160178233687,5.2891172915513,12.3001643113668,4.59405764980503,0.809262246844399,0.464845549297286,29.5923606020802,0.6970372701606,1.23213432070436,0.532306030317022,0,5.37440235401368,2.14687330112987,0.744316738719335,1.58189712359363,0.762520775695299,0.511795582622668,0,1.27281299170375,4.70969184119538,2.33834194858309,3.56898138656871,2.00281083987667,2.62837226045311,0,2.10629228119491,0.48763373908959,8.52997213709495,10.5650146756755,1.63799893689583,11.1710291243433,4.52032466480971,0,27.20099798489,21.9225442626881,0.578775534266688,1.9676842561399,3.44947640836597,13.3224104182893,3.66204283291914,1.57752487424457,1.57198465620994,12.1268157503625,0.354761064070598,2.74439925886963,2.96365403663912,0,2.44954304171488,0.577332676353072,3.35151137767894,1.08890984861323,0.659006605437454,7.74909670808214,15.1624328100863,6.65145230305014,10.3375530093132,1.01489521846434,0,1.13929437434833,0.238231775457789,0,0.648473311192717,0,0.79312517629427,0.106824071127473,1.92495971052672,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,1.89318974933188,0,0,0,0.293016358543788,0,0,0,10.9822462979337,1.78178808499583,27.6444631889309,0.994147647766298,0,0,0,0,1.39473591775749,0.276283915531148,0,0.409074730008619,0,10.2643063928396,5.93131117572357,0,0,1.28236427328014,2.3948309234694,2.22273980289274,0,0.0927680981618513,0,0.260427761085233,0.174919999992391,0,0.1137934482855,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0.538651809526579,1.70913083770502,0,0,0,2.55200927785536,7.23620987874712,2.13213910407454,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0.489698424477443,0.141353071433941,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,1.32691817219825,0,0,0,0.330991955875499,0,0,0.569219092059585,0.416024019039416,0,0.195984794828755,1.39294730528644,0.873633341210151,0,0,0,0,0.290967049465258,0,0.90392296312213,0.685209623233754,0.596143835108969,0,0.195551382734803,3.04603516955828,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0.271808412147228,0,2.14196257036276,0,0,0,0,3.86788897277961,0,1.95497680890578,0,1.43574604915363,1.59743200399193,1.71690419254628,0,0.470284307407084,24.5003920808834,0,1.02418136999391,0.494495150286999,0.606631894687664,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0,0,0.788057072991982,0.629455057619977,0.105600336519406,0,0.191915197319445,2.1440859791201,1.32418394073086,0,0,5.18532894720761,0,0,0.082092520749339,25.047039202457,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0,0,1.38823636338003,1.72924735609633,0.414239055347196,0,0.197611631897944,0,0,0.544017803369474,0.2506898940227,1.22538230705385,0,0,0,0.244052529803926,0,0,0.110929051536852,0.0620964029413835,0.276697269872462,0.124980407962107,0,0,1.41159491818903,0,0.28984205722165,0.895528817321244,5.84283274618061,3.32883516901568,2.46223906857616,3.27038272278348,2.66943366478961,0.686520205190771,2.26846385644859,1.5543720058278,3.54852359975121,2.86734180894664,0,1.86315548251511,0.829412415681711,5.0509925766019,19.8263123488459,1.95334891696384,4.18885733385675,2.44122439922797,5.09176245767166,0.537052785212442,19.9534516747752,42.5962600907519,30.4021101143997,6.18112269329027,9.09223619667982,0,0.385239660814607,0,0.782982875895635,18.3631799664941,7.87176412701035,2.20263034055821,2.14906609297785,0.926404341482917,0.219284049578707,0.530067437837643,0,0.168942440653073,3.33113974164331,1.0362910251936,2.12701969324168,0,0,0,0,0.327609848846413,0.737318726261158,0.211312123358627,0,0,0,0.567515953566836,0.368211900503681,0.139879507719444,1.86623178009892,0,0,0,0,0,0,0,0,5.0880696104547,0,0.80057074828547,1.76337971845342,20.8246924600176,0.128458450192919,0,0,0,0.252071696221718,0,0,0,0,0,1.83428598521679,4.27444964756251,3.4324388592045,0,0.198916222116275,0.300841313397029,0.40341013740704,0,0,16.0496479159895,0.591424344868181,0,0,0,0,0,0.548257766857182,0.496211178389294,0,1.14986184875636,0.535701835878287,0,1.21393120847326,0.227662191351298,0.79832133146375,0,3.77273620762321,0,0,0.118193840883968,0.556157009460346,0.235479278551542,0,0,0.913158720509496,2.59113109462346,0,0.0714765441766563,0,0,0.695433089210318,0.801711364730253,1.03608082081518,1.0243108625637,0.691259661814092,0.860454717640555,0.118332000730565,0.170426809518315,0.423387050190929,2.06196181689645,0.62041277132864,0.955538938977433,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0.940634592723046,2.69663153929296,0,0,0,0,19.8814724184746,0.281951753939561,0.45120521581504,0,0,1.41157948686277,0.481448200135009,0,0.917458566809082,0,0,0,0,2.645134202577,59.1472078885135,12.0165663444169,20.7660749819419,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.31037357147929,1.90624166387043,0.25458863311266,0,0.435433495793923,0.342233301085281,0.134704106029175,1.07583308089015,0.99798106963804,1.05824249194267,0.213454691755431,1.9307228228694,0.179650404213174,2.34640942403454,0.488965776731466,0.406896178315738,1.33151354837103,0.201273793591026,0 | |||
|short_description=p9@THBS1 | |||
}} |
Revision as of 22:55, 11 January 2014
Short description: | p9@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | -33bp_to_uc010bbi.2_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.60e-17 | 76 |
mesodermal cell | 1.17e-12 | 121 |
endothelial cell | 1.90e-11 | 36 |
endothelial cell of vascular tree | 9.34e-11 | 24 |
somatic stem cell | 2.25e-10 | 433 |
meso-epithelial cell | 2.54e-10 | 45 |
embryonic cell | 7.22e-10 | 250 |
multi fate stem cell | 1.18e-09 | 427 |
stem cell | 2.77e-09 | 441 |
preadipocyte | 3.01e-09 | 12 |
lining cell | 1.22e-08 | 58 |
barrier cell | 1.22e-08 | 58 |
blood vessel endothelial cell | 9.73e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.73e-08 | 18 |
extraembryonic cell | 7.29e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
vessel | 3.93e-18 | 68 |
splanchnic layer of lateral plate mesoderm | 3.52e-17 | 83 |
vasculature | 4.91e-16 | 78 |
vascular system | 4.91e-16 | 78 |
epithelial tube open at both ends | 2.10e-15 | 59 |
blood vessel | 2.10e-15 | 59 |
blood vasculature | 2.10e-15 | 59 |
vascular cord | 2.10e-15 | 59 |
cardiovascular system | 6.16e-14 | 109 |
circulatory system | 6.89e-14 | 112 |
epithelial tube | 3.68e-13 | 117 |
artery | 2.62e-12 | 42 |
arterial blood vessel | 2.62e-12 | 42 |
arterial system | 2.62e-12 | 42 |
lateral plate mesoderm | 3.98e-12 | 203 |
mesoderm | 8.51e-12 | 315 |
mesoderm-derived structure | 8.51e-12 | 315 |
presumptive mesoderm | 8.51e-12 | 315 |
surface structure | 8.17e-11 | 99 |
integument | 1.23e-08 | 46 |
integumental system | 1.23e-08 | 46 |
systemic artery | 3.13e-08 | 33 |
systemic arterial system | 3.13e-08 | 33 |
organ component layer | 5.40e-08 | 66 |
blood vessel endothelium | 9.73e-08 | 18 |
endothelium | 9.73e-08 | 18 |
cardiovascular system endothelium | 9.73e-08 | 18 |
simple squamous epithelium | 1.01e-07 | 22 |
squamous epithelium | 1.10e-07 | 25 |
skin of body | 1.30e-07 | 41 |