FFCP PHASE1:Hg19::chr15:66284416..66284418,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:66284416..66284418,- | |||
|id=chr15:66284416..66284418,- | |||
|ontology_enrichment_celltype=CL:0000055!7.58e-13!180;CL:0000057!1.44e-09!75;CL:0000048!4.96e-08!430;CL:0002539!9.17e-08!10;CL:0000723!1.08e-07!436;CL:0002620!2.25e-07!23;CL:0002580!2.77e-07!3;CL:0000034!2.92e-07!444;CL:0000548!9.92e-07!679;CL:0000004!9.92e-07!679;CL:0000255!9.92e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000197;6.69e-17;6!CL:0000098;6.69e-17;6!CL:0002167;6.69e-17;6!CL:0002539;3.71e-15;10!CL:0002588;1.86e-13;2!CL:0000359;6.96e-08;32!CL:0000228;1.35e-07;1!CL:0002372;1.35e-07;1!CL:0000342;1.69e-07;1!CL:0002565;1.69e-07;1!CL:0000737;2.76e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,6.29e-17,6;CL:0000098,6.29e-17,6;CL:0002167,6.29e-17,6;CL:0002539,3.71e-15,10;CL:0002588,1.98e-13,2;CL:0000187,1.70e-09,55;CL:0000680,6.43e-09,58;CL:0000056,6.43e-09,58;CL:0000355,6.43e-09,58;CL:0000359,1.39e-08,32;CL:0000393,2.13e-08,61;CL:0000211,2.13e-08,61;CL:0000192,5.33e-08,43;CL:0000514,5.33e-08,43;CL:0000228,1.30e-07,1;CL:0002372,1.30e-07,1;CL:0000342,1.58e-07,1;CL:0002565,1.58e-07,1;CL:0000737,2.72e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.75e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.95e-16;14!DOID:120;7.72e-11;27!DOID:193;4.96e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.07e-16,14;DOID:120,8.02e-11,27;DOID:193,5.14e-10,29 | |||
|ontology_enrichment_uberon=UBERON:0004237!9.17e-08!10;UBERON:0004695!9.17e-08!10;UBERON:0002111!9.17e-08!10;UBERON:0004178!9.17e-08!10;UBERON:0002118!1.95e-07!5;UBERON:0004532!1.95e-07!5;UBERON:0000947!3.98e-07!21;UBERON:0010191!3.98e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;3.71e-15;10!UBERON:0004695;3.71e-15;10!UBERON:0002111;3.71e-15;10!UBERON:0004178;3.71e-15;10!UBERON:0000947;3.76e-10;21!UBERON:0010191;3.76e-10;21!UBERON:0001135;4.77e-10;15!UBERON:0000992;3.88e-08;13!UBERON:0002506;1.69e-07;1!UBERON:0001769;1.69e-07;1!UBERON:0002119;2.80e-07;4!UBERON:0007195;2.98e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,3.71e-15,10;UBERON:0004695,3.71e-15,10;UBERON:0002111,3.71e-15,10;UBERON:0004178,3.71e-15,10;UBERON:0000947,3.76e-10,21;UBERON:0010191,3.76e-10,21;UBERON:0001135,4.77e-10,15;UBERON:0001134,3.10e-08,62;UBERON:0002036,3.10e-08,62;UBERON:0003082,3.10e-08,62;UBERON:0000992,3.95e-08,13;UBERON:0002385,6.32e-08,64;UBERON:0001015,6.32e-08,64;UBERON:0000383,6.32e-08,64;UBERON:0002506,1.58e-07,1;UBERON:0001769,1.58e-07,1;UBERON:0002119,2.89e-07,4;UBERON:0007195,2.98e-07,1;UBERON:0002329,5.55e-07,71;UBERON:0003059,5.55e-07,71;UBERON:0007282,5.55e-07,71;UBERON:0004290,5.55e-07,71;UBERON:0009618,5.55e-07,71;UBERON:0003077,7.31e-07,72;UBERON:0007285,7.31e-07,72;UBERON:0007524,9.56e-07,73 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,4.70627602516243,5.42425075221579,5.11217063271161,2.92759679274304,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5763320501625,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,33.4995227457444,0.860509862246441,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.538168907066586,0,0,0.600182192168805,0.515262646192195,0.257640540045629,0.558350568994769,30.5485161356692,0.292311015483596,0,0,21.8222176705396,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.354920400119532,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,4.80389868835872,0,0,0,0,0,0,0,0.34779121492523,9.86233031580902,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,5.70547620162874,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,6.65506756898583,5.88815663030634,3.6271555457805,6.91134348457008,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,25.1677636192422,0.561320188866147,0,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25924938732256,0,0.308033580176089,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0.438450885253763,0,3.9353685122798,0,0,0,3.01163839628508,7.27042903497097,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,2.47313502185028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0.686520205190771,0,0,0,0,17.092518262217,0,4.14706207840855,0.265841714557995,15.652351854352,0,40.3653524898923,0.406870733204662,0.181848659202559,0,21.3455529544107,21.8952738784239,0,15.7962024384085,10.4392341517435,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,2.17144469965024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:66284416..66284418,- | |||
}} |
Revision as of 00:09, 12 January 2014
Short description: | p@chr15:66284416..66284418, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:66284416..66284418, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 6.29e-17 | 6 |
sensory epithelial cell | 6.29e-17 | 6 |
olfactory epithelial cell | 6.29e-17 | 6 |
aortic smooth muscle cell | 3.71e-15 | 10 |
smooth muscle cell of the umbilical vein | 1.98e-13 | 2 |
muscle cell | 1.70e-09 | 55 |
muscle precursor cell | 6.43e-09 | 58 |
myoblast | 6.43e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.43e-09 | 58 |
vascular associated smooth muscle cell | 1.39e-08 | 32 |
electrically responsive cell | 2.13e-08 | 61 |
electrically active cell | 2.13e-08 | 61 |
smooth muscle cell | 5.33e-08 | 43 |
smooth muscle myoblast | 5.33e-08 | 43 |
multinucleate cell | 1.30e-07 | 1 |
myotube | 1.30e-07 | 1 |
pigment cell (sensu Vertebrata) | 1.58e-07 | 1 |
iris pigment epithelial cell | 1.58e-07 | 1 |
striated muscle cell | 2.72e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 3.71e-15 | 10 |
arterial system smooth muscle | 3.71e-15 | 10 |
artery smooth muscle tissue | 3.71e-15 | 10 |
aorta smooth muscle tissue | 3.71e-15 | 10 |
aorta | 3.76e-10 | 21 |
aortic system | 3.76e-10 | 21 |
smooth muscle tissue | 4.77e-10 | 15 |
skeletal muscle tissue | 3.10e-08 | 62 |
striated muscle tissue | 3.10e-08 | 62 |
myotome | 3.10e-08 | 62 |
female gonad | 3.95e-08 | 13 |
muscle tissue | 6.32e-08 | 64 |
musculature | 6.32e-08 | 64 |
musculature of body | 6.32e-08 | 64 |
iris epithelium | 1.58e-07 | 1 |
iris | 1.58e-07 | 1 |
left ovary | 2.89e-07 | 4 |
stroma of bone marrow | 2.98e-07 | 1 |
somite | 5.55e-07 | 71 |
presomitic mesoderm | 5.55e-07 | 71 |
presumptive segmental plate | 5.55e-07 | 71 |
dermomyotome | 5.55e-07 | 71 |
trunk paraxial mesoderm | 5.55e-07 | 71 |
paraxial mesoderm | 7.31e-07 | 72 |
presumptive paraxial mesoderm | 7.31e-07 | 72 |
dense mesenchyme tissue | 9.56e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.07e-16 | 14 |
female reproductive organ cancer | 8.02e-11 | 27 |
reproductive organ cancer | 5.14e-10 | 29 |