FFCP PHASE1:Hg19::chr15:90040037..90040051,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51458 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18140 | |||
|TSSclassifier=weak | |||
|UniProt=Q9UBD6 | |||
|association_with_transcript=-193bp_to_ENST00000268122_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_RHCG_5end | |||
|id=chr15:90040037..90040051,- | |||
|ontology_enrichment_celltype=CL:0002057!1.62e-17!42;CL:0000860!5.60e-16!45;CL:0000557!5.76e-14!71;CL:0002009!9.03e-12!65;CL:0000839!1.72e-11!70;CL:0000766!3.91e-10!76;CL:0002194!1.15e-09!63;CL:0000576!1.15e-09!63;CL:0000040!1.15e-09!63;CL:0000559!1.15e-09!63;CL:0000569!2.80e-09!4;CL:0000011!2.80e-09!4;CL:0000068!6.09e-08!3;CL:0000069!6.09e-08!3;CL:0000307!6.09e-08!3;CL:0000377!6.09e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-37;33!CL:0002057;1.14e-37;33!CL:0000473;2.88e-27;39!CL:0000234;2.88e-27;39!CL:0000576;4.32e-19;48!CL:0001014;9.18e-18;2!CL:0001016;9.18e-18;2!CL:0000766;5.95e-14;69!CL:0002087;2.48e-09;104!CL:0000453;1.21e-07;5!CL:0000763;6.55e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.38e-42,42;CL:0002057,1.38e-42,42;CL:0000473,6.01e-37,48;CL:0000234,6.01e-37,48;CL:0002009,2.26e-36,61;CL:0000557,6.55e-33,67;CL:0002194,4.80e-29,59;CL:0000576,4.80e-29,59;CL:0000040,4.80e-29,59;CL:0000559,4.80e-29,59;CL:0000839,9.68e-26,66;CL:0000766,2.07e-23,72;CL:0000763,1.98e-19,108;CL:0000049,1.98e-19,108;CL:0001014,8.80e-18,2;CL:0001016,8.80e-18,2;CL:0002031,3.30e-17,120;CL:0000738,7.54e-15,136;CL:0002087,9.42e-14,115;CL:0002032,4.31e-12,161;CL:0000837,4.31e-12,161;CL:0000037,1.82e-11,168;CL:0000988,9.87e-11,177;CL:0000453,1.19e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.08e-27;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.47e-13!80;UBERON:0001474!1.50e-11!86;UBERON:0004765!9.90e-10!101;UBERON:0001434!9.90e-10!101;UBERON:0002390!1.32e-09!102;UBERON:0003061!1.32e-09!102;UBERON:0002193!4.88e-09!112;UBERON:0002405!7.67e-08!115;UBERON:0000922!4.47e-07!612;UBERON:0000923!6.31e-07!604;UBERON:0005291!6.31e-07!604;UBERON:0006598!6.31e-07!604;UBERON:0002532!6.31e-07!604;UBERON:0002050!6.95e-07!605;UBERON:0005423!6.95e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.08e-09;1!UBERON:0007195;2.08e-09;1!UBERON:0001961;2.08e-09;1!UBERON:0001744;2.08e-09;1!UBERON:0001042;2.08e-09;1!UBERON:0001735;2.08e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.55e-32,76;UBERON:0001474,9.13e-30,82;UBERON:0002405,5.05e-29,93;UBERON:0004765,6.99e-27,90;UBERON:0002193,1.36e-24,108;UBERON:0002390,1.83e-24,98;UBERON:0003061,1.83e-24,98;UBERON:0001434,6.44e-24,100;UBERON:0002204,1.21e-16,167;UBERON:0003081,4.17e-13,203;UBERON:0007195,2.26e-09,1;UBERON:0002372,2.67e-09,1;UBERON:0001961,2.67e-09,1;UBERON:0001744,2.67e-09,1;UBERON:0001735,2.67e-09,1;UBERON:0000926,3.18e-07,315;UBERON:0004120,3.18e-07,315;UBERON:0006603,3.18e-07,315 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,2.21598163412751,1.80490002723128,0.651032612147555,0,0,0,0,0,0,0,0.411167888021826,1.23882548358041,0.575384784644301,0,0,17.5820297175675,11.6187243045089,23.0225027210381,0,0,0.449446968890169,22.038040250705,13.799948164272,29.4095077867559,0,0,0,4.93355705668593,9.64554881974938,8.71951148593805,0,0,0,4.84319602106695,4.05105399586321,5.06339819905415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0.576479813667846,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0.482561763430822,0,0,0,0,0,0.116210378459959,0,0,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.30347334256665,0,0,0,0,0,0,0,1.43124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,2.17781969722645,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.678923115418936,0,0,0,0,0.0633107959558787,0.195551382734803,0.320635281006135,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62434728878751,3.86900977278975,0,0,0,0,0,0.896436696664224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0.122026264901963,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0.453692771289717,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17716747896961,0.342233301085281,1.0776328482334,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@RHCG | |||
}} |
Revision as of 01:08, 12 January 2014
Short description: | p2@RHCG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RHCG_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -193bp_to_ENST00000268122_5end |
EntrezGene: | RHCG |
HGNC: | 18140 |
UniProt: | Q9UBD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.38e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-42 | 42 |
defensive cell | 6.01e-37 | 48 |
phagocyte | 6.01e-37 | 48 |
macrophage dendritic cell progenitor | 2.26e-36 | 61 |
granulocyte monocyte progenitor cell | 6.55e-33 | 67 |
monopoietic cell | 4.80e-29 | 59 |
monocyte | 4.80e-29 | 59 |
monoblast | 4.80e-29 | 59 |
promonocyte | 4.80e-29 | 59 |
myeloid lineage restricted progenitor cell | 9.68e-26 | 66 |
myeloid leukocyte | 2.07e-23 | 72 |
myeloid cell | 1.98e-19 | 108 |
common myeloid progenitor | 1.98e-19 | 108 |
CD1a-positive Langerhans cell | 8.80e-18 | 2 |
immature CD1a-positive Langerhans cell | 8.80e-18 | 2 |
hematopoietic lineage restricted progenitor cell | 3.30e-17 | 120 |
leukocyte | 7.54e-15 | 136 |
nongranular leukocyte | 9.42e-14 | 115 |
hematopoietic oligopotent progenitor cell | 4.31e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.31e-12 | 161 |
hematopoietic stem cell | 1.82e-11 | 168 |
hematopoietic cell | 9.87e-11 | 177 |
Langerhans cell | 1.19e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.55e-32 | 76 |
bone element | 9.13e-30 | 82 |
immune system | 5.05e-29 | 93 |
skeletal element | 6.99e-27 | 90 |
hemolymphoid system | 1.36e-24 | 108 |
hematopoietic system | 1.83e-24 | 98 |
blood island | 1.83e-24 | 98 |
skeletal system | 6.44e-24 | 100 |
musculoskeletal system | 1.21e-16 | 167 |
lateral plate mesoderm | 4.17e-13 | 203 |
stroma of bone marrow | 2.26e-09 | 1 |
tonsil | 2.67e-09 | 1 |
mucosa-associated lymphoid tissue | 2.67e-09 | 1 |
lymphoid tissue | 2.67e-09 | 1 |
tonsillar ring | 2.67e-09 | 1 |
mesoderm | 3.18e-07 | 315 |
mesoderm-derived structure | 3.18e-07 | 315 |
presumptive mesoderm | 3.18e-07 | 315 |