FFCP PHASE1:Hg19::chr15:91083167..91083181,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64784 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26148 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=318bp_to_ENST00000560927_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_12_at_CRTC3_5end | |||
|id=chr15:91083167..91083181,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.53e-32!18;CL:0000789!1.53e-32!18;CL:0002420!1.53e-32!18;CL:0002419!1.53e-32!18;CL:0000790!1.53e-32!18;CL:0000084!6.45e-30!25;CL:0000827!6.45e-30!25;CL:0000624!5.29e-23!6;CL:0000838!8.74e-21!52;CL:0000542!2.65e-20!53;CL:0000051!2.65e-20!53;CL:0000625!1.71e-15!11;CL:0002087!1.18e-12!119;CL:0000898!1.45e-12!3;CL:0000842!2.50e-11!3;CL:0000623!3.99e-11!3;CL:0000825!3.99e-11!3;CL:0000738!6.83e-11!140;CL:0000815!5.58e-09!2;CL:0000792!5.58e-09!2;CL:0002677!5.58e-09!2;CL:0002031!1.10e-08!124;CL:0000037!1.21e-08!172;CL:0000566!1.21e-08!172;CL:0000224!1.32e-08!4;CL:0000988!7.70e-08!182;CL:0002032!8.83e-07!165;CL:0000837!8.83e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.75e-53;6!CL:0000898;6.83e-28;3!CL:0000791;1.09e-23;18!CL:0000789;1.09e-23;18!CL:0002419;1.09e-23;18!CL:0000815;1.97e-19;2!CL:0000792;1.97e-19;2!CL:0002677;1.97e-19;2!CL:0000084;7.09e-17;25!CL:0000895;3.00e-10;1!CL:0000542;1.85e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.92e-53,6;CL:0000898,4.32e-28,3;CL:0000791,8.86e-24,18;CL:0000789,8.86e-24,18;CL:0002420,8.86e-24,18;CL:0002419,8.86e-24,18;CL:0000790,8.86e-24,18;CL:0000815,1.97e-19,2;CL:0000792,1.97e-19,2;CL:0002677,1.97e-19,2;CL:0000084,6.12e-17,25;CL:0000827,6.12e-17,25;CL:0000838,1.14e-12,52;CL:0000542,2.08e-12,53;CL:0000051,2.08e-12,53;CL:0000810,1.89e-10,1;CL:0000895,1.89e-10,1;CL:0002436,1.89e-10,1;CL:0002427,1.89e-10,1;CL:0002428,1.89e-10,1;CL:0002429,1.89e-10,1;CL:0002433,1.89e-10,1;CL:0002431,1.89e-10,1;CL:0002432,1.89e-10,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.09e-23;18!CL:0002427;3.00e-10;1!CL:0000051;1.85e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;3.00e-10;1!DOID:0070004;3.00e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,4.75e-10,1;DOID:0070004,4.75e-10,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.7703879310245,1.17903228824749,1.23360899399706,2.50779743086017,2.93330039970231,3.78758244587787,0,2.67385096524417,2.3568472597987,3.54454231333794,2.97884250141517,4.09892223122161,3.38154303655683,1.31550323682941,0.552700035571697,1.44901542867526,0.593146252648242,0.802622484269139,2.09071047609954,1.69964014046349,1.91610246800961,0.34362744548263,3.79529538029254,0.637130828648193,0.651083453856419,0,0.602300476311091,0.639933055772092,0,1.65744076430812,0,0.80642697289893,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,1.07813787429759,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.952927101831156,0,0.648473311192717,0,0,0,0,0,0,0,0.142283686696828,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.26940821205835,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@CRTC3 | |||
}} |
Revision as of 01:15, 12 January 2014
Short description: | p12@CRTC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CRTC3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 318bp_to_ENST00000560927_5end |
EntrezGene: | CRTC3 |
HGNC: | 26148 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.92e-53 | 6 |
naive T cell | 4.32e-28 | 3 |
mature alpha-beta T cell | 8.86e-24 | 18 |
alpha-beta T cell | 8.86e-24 | 18 |
immature T cell | 8.86e-24 | 18 |
mature T cell | 8.86e-24 | 18 |
immature alpha-beta T cell | 8.86e-24 | 18 |
regulatory T cell | 1.97e-19 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.97e-19 | 2 |
naive regulatory T cell | 1.97e-19 | 2 |
T cell | 6.12e-17 | 25 |
pro-T cell | 6.12e-17 | 25 |
lymphoid lineage restricted progenitor cell | 1.14e-12 | 52 |
lymphocyte | 2.08e-12 | 53 |
common lymphoid progenitor | 2.08e-12 | 53 |
CD4-positive, alpha-beta thymocyte | 1.89e-10 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.89e-10 | 1 |
mature CD4 single-positive thymocyte | 1.89e-10 | 1 |
resting double-positive thymocyte | 1.89e-10 | 1 |
double-positive blast | 1.89e-10 | 1 |
CD69-positive double-positive thymocyte | 1.89e-10 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.89e-10 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.89e-10 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.89e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.75e-10 | 1 |
myeloma | 4.75e-10 | 1 |