FFCP PHASE1:Hg19::chr17:14204096..14204128,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr17:14204096..14204128,- | |||
|id=chr17:14204096..14204128,- | |||
|ontology_enrichment_celltype=CL:0002057!4.58e-13!42;CL:0000738!5.18e-12!140;CL:0000860!1.34e-11!45;CL:0000766!3.23e-10!76;CL:0000988!5.39e-10!182;CL:0002087!8.68e-10!119;CL:0000037!1.75e-09!172;CL:0000566!1.75e-09!172;CL:0000034!3.65e-08!444;CL:0000219!7.23e-08!390;CL:0002194!8.42e-08!63;CL:0000576!8.42e-08!63;CL:0000040!8.42e-08!63;CL:0000559!8.42e-08!63;CL:0002032!8.43e-08!165;CL:0000837!8.43e-08!165;CL:0002031!8.75e-08!124;CL:0000134!9.83e-08!358;CL:0000048!1.16e-07!430;CL:0000723!1.84e-07!436;CL:0002009!2.60e-07!65;CL:0002320!4.17e-07!365;CL:0000839!6.23e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.73e-19;33!CL:0002057;1.73e-19;33!CL:0000784;1.88e-19;3!CL:0000771;1.82e-14;2!CL:0000576;9.15e-14;48!CL:0000473;2.81e-13;39!CL:0000234;2.81e-13;39!CL:0002393;1.91e-10;6!CL:0002397;1.91e-10;6!CL:0000766;3.06e-10;69!CL:0002601;1.85e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.74e-27,42;CL:0002057,7.74e-27,42;CL:0000473,3.93e-23,48;CL:0000234,3.93e-23,48;CL:0000766,8.79e-22,72;CL:0002194,9.36e-21,59;CL:0000576,9.36e-21,59;CL:0000040,9.36e-21,59;CL:0000559,9.36e-21,59;CL:0002009,5.49e-20,61;CL:0000784,1.46e-19,3;CL:0000839,2.88e-18,66;CL:0000557,5.92e-18,67;CL:0000738,3.31e-16,136;CL:0000771,1.82e-14,2;CL:0000763,1.99e-13,108;CL:0000049,1.99e-13,108;CL:0000988,8.44e-13,177;CL:0000037,2.52e-12,168;CL:0002087,2.80e-12,115;CL:0002031,1.25e-11,120;CL:0002032,2.77e-10,161;CL:0000837,2.77e-10,161;CL:0002601,2.80e-07,1;CL:0002393,4.27e-07,9;CL:0002397,4.27e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.79e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.16e-07!102;UBERON:0003061!3.16e-07!102;UBERON:0002384!5.99e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.69e-15,76;UBERON:0001474,3.69e-14,82;UBERON:0002405,5.79e-14,93;UBERON:0002390,4.29e-13,98;UBERON:0003061,4.29e-13,98;UBERON:0004765,1.20e-12,90;UBERON:0002193,1.35e-11,108;UBERON:0001434,4.26e-11,100;UBERON:0003081,2.90e-07,203 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0.393364276848904,0.767658796194425,0.464448369948228,0,0.30120591877825,0,0,0,0,3.32397245119126,7.42014455639524,2.60413044859022,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0.619412741790207,0.28769239232215,0.256160706529101,1.18241114944293,1.37898272294647,0,1.35426486594342,0.564727018627814,0,0,1.22433556948361,0,3.19668562899521,0.329851300186716,0,0.852449501065388,2.90209238628584,2.8369261234557,2.4912889959823,0,0,1.3031330682307,0.605399502633369,2.20966581592539,5.06339819905415,0.211255286311942,0,0,0.22465726229299,0,0,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,1.17447437874188,0,0,1.68152568894461,0.263384084775077,0.196709770113833,0,0.205601498999509,0.501559486172034,0.32592226663359,0,1.94826728407911,0.111410456885174,0.589211814949674,1.10766947291811,0.541607727530031,0.384273959177026,0.520237390239513,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0.132957960518865,1.90792499444274,3.43196946468077,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,10.5424333948851,11.6334079244498,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0.421352420106746,0.204154171254893,0.122834317311768,0.413303124703062,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0,0.206105058476878,0,0.558350568994769,0,0.194874010322397,0,0.368199594569197,0.646584227275248,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.896681151948218,0.394061520403854,0.862510299438069,0.77005821767849,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.206082023295445,0.366277859273374,0.330037999682352,0,0,0,0,0.462145851343933,0.307007349452259,0,0.107420244868274,0.290033387828457,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0.38126038784765,0,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0,0,1.06428319221179,0,0,0.75894634753143,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,2.67464122265948,0,0,0,0,0,0.140669416410513,0.333926115068718,0.329607748453519,0.211125408127993,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.514784993585894,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.247247575143499,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0.511164065356265,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0.249960815924213,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0.829412415681711,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867479195013787,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0.245148321753905,0,0,0.297046400327086,0,0.169927114687817,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0.267964130156178,0,0,0,0,0.129177819672012,1.24149428591716,0,0,0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| |||
|short_description=p@chr17:14204096..14204128,- | |||
}} |
Revision as of 14:00, 20 January 2014
Short description: | p@chr17:14204096..14204128, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:14204096..14204128, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.74e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.74e-27 | 42 |
defensive cell | 3.93e-23 | 48 |
phagocyte | 3.93e-23 | 48 |
myeloid leukocyte | 8.79e-22 | 72 |
monopoietic cell | 9.36e-21 | 59 |
monocyte | 9.36e-21 | 59 |
monoblast | 9.36e-21 | 59 |
promonocyte | 9.36e-21 | 59 |
macrophage dendritic cell progenitor | 5.49e-20 | 61 |
plasmacytoid dendritic cell | 1.46e-19 | 3 |
myeloid lineage restricted progenitor cell | 2.88e-18 | 66 |
granulocyte monocyte progenitor cell | 5.92e-18 | 67 |
leukocyte | 3.31e-16 | 136 |
eosinophil | 1.82e-14 | 2 |
myeloid cell | 1.99e-13 | 108 |
common myeloid progenitor | 1.99e-13 | 108 |
hematopoietic cell | 8.44e-13 | 177 |
hematopoietic stem cell | 2.52e-12 | 168 |
nongranular leukocyte | 2.80e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.25e-11 | 120 |
hematopoietic oligopotent progenitor cell | 2.77e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.77e-10 | 161 |
uterine smooth muscle cell | 2.80e-07 | 1 |
intermediate monocyte | 4.27e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.27e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.69e-15 | 76 |
bone element | 3.69e-14 | 82 |
immune system | 5.79e-14 | 93 |
hematopoietic system | 4.29e-13 | 98 |
blood island | 4.29e-13 | 98 |
skeletal element | 1.20e-12 | 90 |
hemolymphoid system | 1.35e-11 | 108 |
skeletal system | 4.26e-11 | 100 |
lateral plate mesoderm | 2.90e-07 | 203 |