FFCP PHASE1:Hg19::chr17:15847609..15847620,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr17:15847609..15847620,- | |||
|id=chr17:15847609..15847620,- | |||
|ontology_enrichment_celltype=CL:0002057!3.54e-59!42;CL:0000860!1.21e-54!45;CL:0002009!2.14e-45!65;CL:0000557!2.02e-43!71;CL:0002194!2.67e-41!63;CL:0000576!2.67e-41!63;CL:0000040!2.67e-41!63;CL:0000559!2.67e-41!63;CL:0000839!8.37e-39!70;CL:0000766!4.78e-35!76;CL:0000763!4.09e-24!112;CL:0000049!4.09e-24!112;CL:0002031!2.53e-22!124;CL:0002087!3.30e-22!119;CL:0000738!1.85e-21!140;CL:0000037!1.24e-15!172;CL:0000566!1.24e-15!172;CL:0002032!1.90e-14!165;CL:0000837!1.90e-14!165;CL:0000988!3.07e-14!182;CL:0000134!6.46e-08!358;CL:0002320!1.50e-07!365;CL:0000048!2.87e-07!430;CL:0000723!5.31e-07!436;CL:0001014!7.25e-07!2;CL:0001016!7.25e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.77e-70;33!CL:0002057;7.77e-70;33!CL:0000473;4.18e-57;39!CL:0000234;4.18e-57;39!CL:0000576;3.04e-36;48!CL:0000766;2.25e-25;69!CL:0002087;1.69e-13;104!CL:0000763;1.88e-12;100!CL:0000511;3.29e-10;1!CL:0002625;3.29e-10;1!CL:0000216;3.29e-10;1!CL:0000738;8.60e-08;136!CL:0002393;7.98e-07;6!CL:0002397;7.98e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.60e-75,42;CL:0002057,3.60e-75,42;CL:0000473,1.38e-72,48;CL:0000234,1.38e-72,48;CL:0002194,1.59e-57,59;CL:0000576,1.59e-57,59;CL:0000040,1.59e-57,59;CL:0000559,1.59e-57,59;CL:0002009,1.40e-55,61;CL:0000839,3.17e-51,66;CL:0000557,1.97e-50,67;CL:0000766,8.72e-47,72;CL:0002087,1.67e-31,115;CL:0000763,2.17e-30,108;CL:0000049,2.17e-30,108;CL:0002031,4.36e-27,120;CL:0000738,3.21e-26,136;CL:0000037,1.10e-20,168;CL:0000988,1.75e-19,177;CL:0002032,1.77e-19,161;CL:0000837,1.77e-19,161;CL:0000511,2.74e-10,1;CL:0002625,2.74e-10,1;CL:0000216,2.74e-10,1;CL:0000134,3.63e-08,354;CL:0002320,6.06e-08,361;CL:0000219,3.71e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.08e-49;42!CL:0000049;8.55e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.70e-37!80;UBERON:0001474!3.14e-34!86;UBERON:0004765!2.24e-31!101;UBERON:0001434!2.24e-31!101;UBERON:0002390!2.91e-31!102;UBERON:0003061!2.91e-31!102;UBERON:0002193!1.36e-27!112;UBERON:0002405!2.75e-26!115;UBERON:0002204!1.19e-18!167;UBERON:0003081!5.31e-17!216;UBERON:0000926!1.52e-07!448;UBERON:0004120!1.52e-07!448;UBERON:0006603!1.52e-07!448;UBERON:0002384!4.68e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;3.29e-10;1!UBERON:0001343;3.29e-10;1!UBERON:0004910;3.29e-10;1!UBERON:0004813;3.29e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.29e-44,76;UBERON:0001474,8.26e-41,82;UBERON:0002390,2.06e-37,98;UBERON:0003061,2.06e-37,98;UBERON:0004765,5.68e-37,90;UBERON:0002405,1.06e-35,93;UBERON:0002193,1.03e-33,108;UBERON:0001434,5.01e-33,100;UBERON:0002204,1.13e-18,167;UBERON:0003081,1.71e-18,203;UBERON:0000926,8.25e-11,315;UBERON:0004120,8.25e-11,315;UBERON:0006603,8.25e-11,315;UBERON:0001136,2.74e-10,1;UBERON:0001343,2.74e-10,1;UBERON:0004910,2.74e-10,1;UBERON:0005154,2.74e-10,1;UBERON:0005295,2.74e-10,1;UBERON:0004813,2.74e-10,1;UBERON:0005297,2.74e-10,1;UBERON:0005294,2.74e-10,1;UBERON:0010141,2.74e-10,1;UBERON:0005891,2.74e-10,1;UBERON:0002384,1.22e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66198622559563,1.20326668482085,0.434021741431704,0,0,0,0.145398238779565,0,0.242584061187816,0.697287110717054,0,1.23882548358041,0.575384784644301,1.0246428261164,0.945928919554341,5.5159308917859,3.87290810150296,2.70852973188684,0.564727018627814,0,0.449446968890169,10.1007684482398,6.09765151444578,12.1474053901818,0.329851300186716,0,0,7.2552309657146,2.8369261234557,5.60540024096017,1.7587406567972,1.5644487552606,2.17188844705117,9.08099253950053,2.57794345191295,4.74693581161327,0,0.425208599930087,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,1.2942852049117,0.426910231213777,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:15847609..15847620,- | |||
}} |
Revision as of 14:02, 20 January 2014
Short description: | p@chr17:15847609..15847620, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:15847609..15847620, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.60e-75 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.60e-75 | 42 |
defensive cell | 1.38e-72 | 48 |
phagocyte | 1.38e-72 | 48 |
monopoietic cell | 1.59e-57 | 59 |
monocyte | 1.59e-57 | 59 |
monoblast | 1.59e-57 | 59 |
promonocyte | 1.59e-57 | 59 |
macrophage dendritic cell progenitor | 1.40e-55 | 61 |
myeloid lineage restricted progenitor cell | 3.17e-51 | 66 |
granulocyte monocyte progenitor cell | 1.97e-50 | 67 |
myeloid leukocyte | 8.72e-47 | 72 |
nongranular leukocyte | 1.67e-31 | 115 |
myeloid cell | 2.17e-30 | 108 |
common myeloid progenitor | 2.17e-30 | 108 |
hematopoietic lineage restricted progenitor cell | 4.36e-27 | 120 |
leukocyte | 3.21e-26 | 136 |
hematopoietic stem cell | 1.10e-20 | 168 |
hematopoietic cell | 1.75e-19 | 177 |
hematopoietic oligopotent progenitor cell | 1.77e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-19 | 161 |
androgen binding protein secreting cell | 2.74e-10 | 1 |
seminiferous tubule epithelial cell | 2.74e-10 | 1 |
Sertoli cell | 2.74e-10 | 1 |
mesenchymal cell | 3.63e-08 | 354 |
connective tissue cell | 6.06e-08 | 361 |
motile cell | 3.71e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.29e-44 | 76 |
bone element | 8.26e-41 | 82 |
hematopoietic system | 2.06e-37 | 98 |
blood island | 2.06e-37 | 98 |
skeletal element | 5.68e-37 | 90 |
immune system | 1.06e-35 | 93 |
hemolymphoid system | 1.03e-33 | 108 |
skeletal system | 5.01e-33 | 100 |
musculoskeletal system | 1.13e-18 | 167 |
lateral plate mesoderm | 1.71e-18 | 203 |
mesoderm | 8.25e-11 | 315 |
mesoderm-derived structure | 8.25e-11 | 315 |
presumptive mesoderm | 8.25e-11 | 315 |
mesothelium | 2.74e-10 | 1 |
seminiferous tubule of testis | 2.74e-10 | 1 |
epithelium of male gonad | 2.74e-10 | 1 |
epithelial cord | 2.74e-10 | 1 |
sex cord | 2.74e-10 | 1 |
seminiferous tubule epithelium | 2.74e-10 | 1 |
testis sex cord | 2.74e-10 | 1 |
genital ridge | 2.74e-10 | 1 |
primitive sex cord of indifferent gonad | 2.74e-10 | 1 |
coelomic epithelium | 2.74e-10 | 1 |
connective tissue | 1.22e-07 | 371 |