FFCP PHASE1:Hg19::chr17:38256799..38256815,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9572 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7962 | |||
|TSSclassifier=strong | |||
|UniProt=F1D8S3,P20393 | |||
|association_with_transcript=157bp_to_NM_021724,uc002htz.1,uc010cwq.1_5end | |||
|coexpression_cluster_id=C2403 | |||
|description=CAGE_peak_3_at_NR1D1_5end | |||
|id=chr17:38256799..38256815,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-19!115;UBERON:0001049!6.17e-07!57;UBERON:0005068!6.17e-07!57;UBERON:0006241!6.17e-07!57;UBERON:0007135!6.17e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-20,114;UBERON:0001049,1.78e-07,56;UBERON:0005068,1.78e-07,56;UBERON:0006241,1.78e-07,56;UBERON:0007135,1.78e-07,56;UBERON:0000073,4.42e-07,53;UBERON:0002616,4.42e-07,53;UBERON:0002780,5.44e-07,41;UBERON:0001890,5.44e-07,41;UBERON:0003080,5.44e-07,41;UBERON:0006240,5.44e-07,41 | |||
|phase1_expression=0.54503513781167,1.2846031433459,1.9733616573436,1.0007329835313,0.893922188854576,0,2.53299878168311,1.26343974685366,0.522371256399677,0.245733936501509,0,0.655324116390517,0.527533956456907,0,0.331397375727916,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0,0,0,0.0821005894499457,0,3.93364276848904,3.45446458287491,2.78669021968937,1.83884244895785,1.8072355126695,2.58827807116751,0,0,0,2.21598163412751,5.21415563422368,1.95309783644267,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0.512321413058201,0,0.344745680736619,0,2.70852973188684,0.376484679085209,0.272906150057846,0,0,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0.521482918420201,0,6.65939452896706,0.368277635987565,0,2.5350634357433,4.25208599930087,2.09658645508376,0.561643155732475,0.750884464207532,0.32145117339416,11.4005097496499,11.3382506003481,5.29726045917438,0,0,0,0,0,0,0,0,0.569212969109448,1.76171156811282,0.382273228125229,0,0.560508562981536,0,3.93419540227666,9.43225830597995,17.4761274149583,0,0.32592226663359,0,1.94826728407911,0.222820913770347,7.9543595018206,8.4182879941776,4.87446954777028,0.512365278902701,0.780356085359269,0.164437904603676,0,0,1.92772532110679,0,2.09071047609954,0.113309342697566,6.89796888483458,2.74901956386104,1.77113784413652,0.637130828648193,0,2.85135613334512,1.20460095262218,0.76791966692651,1.24930726552346,0.236777252044017,0.821127996921047,3.22570789159572,5.88368430723716,2.89648807765598,2.43806866313962,0,0,1.0843174571537,2.50668955317945,4.34539556882471,1.5905718941022,8.27279279514481,0,0,0,12.1810540212873,3.27865759463288,3.33705998505986,0,0,0,0.238490624305342,0,0,0.198762407366705,0.860234595106124,1.73570250803797,1.13061588384802,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0.66944122552934,0.402829317109147,0.760272105718513,0.732186172644509,1.10298924103761,0.81014194788176,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,7.75560528296651,4.36094052142534,9.93943903390637,1.01304409331664,2.78059279707759,1.43418310374407,1.41867352879343,0,0,0.74000264525148,0.311211035399766,0.404132016209064,0,0,0,0.468642863667593,2.18512053781224,0,0.747243402759005,0,0,0,0.61246251376468,0.245668634623536,0.309977343527296,0,1.23633464639278,4.55080680969013,2.87447256726495,0,0.125118519871964,0.277064115484183,3.07284334616587,0.30648779579902,1.50238058906597,0.113432183160021,6.63741652048789,1.2813443329114,0.211931901159562,4.50136644126603,3.19462840639161,3.09168648054755,2.60563598864226,10.801685263441,2.63079913935236,3.28163906517349,0.368199594569197,0.969876340912871,12.0703261455649,3.82857973265033,1.52604533079439,1.93260853163297,0.545492241181669,1.14721838155602,0.243947412259191,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,9.66944449467364,2.3218396401599,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0.435758888184812,0,0.269662616320329,0,0,1.4763109092493,0,1.2347220339942,0,8.87285243752816,5.89696330006576,4.13552934676983,0,0.122988438543114,0.171567810298526,2.96325770603289,10.1161577931858,2.01057944823262,1.11106134190236,0,1.03993478527958,0,0.463721619900307,0.587043471179108,1.01056513432752,3.70388410061289,0.761016608938393,0,0,0,0,0,0.93733833986777,3.19166043577833,1.70130116690864,9.76187897461046,7.55648240136301,6.9008882249738,0,0.176096868026452,4.14656231081544,2.01767934783746,1.51490920111656,0.063497894292169,2.29193055334967,3.51652341630141,1.71072446022705,0.102827492703324,0,0.571652865261156,0,0,0,1.42198887333556,0,0.845302752556,1.32969058292435,2.08014873822732,0.257207374262142,0,0,0.714889968290738,1.62786481617433,0,0.65147236858747,0.355391948742546,0,1.50719688529793,0.871533458600294,0.799783929456456,0,3.01354254859276,0,0.239624855491583,0,12.8373214536647,0.723906533337896,1.2328579353023,0.537182889719687,0.112085143993527,3.94061520403854,5.60631694634745,2.69520376187472,0,0,0,0,0,0,0,2.07207756718018,0.12269149171914,0.500170521059677,0,2.49565033836969,2.85486382075459,2.99634588564476,4.09994952474496,1.50473049863859,6.82222512167955,2.0694614258501,0,0.184369168541703,1.30325421702124,0.783204629850962,0,1.44737618286021,4.96142661882819,2.77491650288955,7.27506171471023,0,1.20956117331872,1.48864684691266,10.2819522103002,0,2.56278298511402,0.511707249066704,4.18220194973379,2.96836132889982,1.69630663182921,0.710246901252508,3.03870477251094,2.07701771673448,2.67283870457906,0.120859449591622,1.80455823272956,6.99815515912812,1.60740227430449,0.910455840033585,0.786746489756545,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,1.54227252690289,0.270946437543853,0,0.254876273045038,0,0,0,0,0.512900250232778,0,0,6.69766575710195,0.183138929636687,0.247528499761764,1.14853107599234,3.25030123018261,0,1.06337790121334,0.308097234229289,0,0.137836572484531,0.107420244868274,0.145016693914229,0.340906509664404,0.623224249527161,1.81813406897076,0.576570202095319,0.638063562472921,1.9219978362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| |||
|short_description=p3@NR1D1 | |||
}} |
Revision as of 15:05, 20 January 2014
Short description: | p3@NR1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NR1D1_5end |
Coexpression cluster: | C2403_skeletal_cervix_eye_cerebellum_dura_testicular_mature |
Association with transcript: | 157bp_to_NM_021724, uc002htz.1, uc010cwq.1_5end |
EntrezGene: | NR1D1 |
HGNC: | 7962 |
UniProt: | F1D8S3P20393 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-20 | 114 |
neural tube | 1.78e-07 | 56 |
neural rod | 1.78e-07 | 56 |
future spinal cord | 1.78e-07 | 56 |
neural keel | 1.78e-07 | 56 |
regional part of nervous system | 4.42e-07 | 53 |
regional part of brain | 4.42e-07 | 53 |
regional part of forebrain | 5.44e-07 | 41 |
forebrain | 5.44e-07 | 41 |
anterior neural tube | 5.44e-07 | 41 |
future forebrain | 5.44e-07 | 41 |