FFCP PHASE1:Hg19::chr17:43510225..43510258,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=201176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31813 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_ENST00000527678_5end | |||
|description=CAGE_peak_3_at_ARHGAP27_5end | |||
|id=chr17:43510225..43510258,- | |||
|ontology_enrichment_celltype=CL:0000763!9.34e-30!112;CL:0000049!9.34e-30!112;CL:0000766!1.05e-28!76;CL:0000557!1.16e-25!71;CL:0002009!2.16e-24!65;CL:0002057!2.20e-24!42;CL:0002194!3.94e-23!63;CL:0000576!3.94e-23!63;CL:0000040!3.94e-23!63;CL:0000559!3.94e-23!63;CL:0000839!9.69e-23!70;CL:0000860!7.29e-21!45;CL:0000037!4.72e-14!172;CL:0000566!4.72e-14!172;CL:0002032!1.37e-12!165;CL:0000837!1.37e-12!165;CL:0000988!2.55e-12!182;CL:0000738!2.29e-11!140;CL:0000115!2.54e-10!35;CL:0002139!1.31e-08!24;CL:0002078!2.57e-08!44;CL:0002393!2.97e-07!9;CL:0002397!2.97e-07!9;CL:0002031!3.81e-07!124;CL:0002087!6.31e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.37e-21;33!CL:0002057;3.37e-21;33!CL:0000576;1.89e-20;48!CL:0000473;1.20e-18;39!CL:0000234;1.20e-18;39!CL:0000766;4.35e-17;69!CL:0000763;1.41e-12;100!CL:0000115;4.21e-12;36!CL:0002139;3.65e-10;24!CL:1000449;1.78e-08;15!CL:1000497;9.86e-08;17!CL:0002518;9.86e-08;17!CL:0000071;1.04e-07;18!CL:0002078;2.28e-07;45!CL:0000094;2.33e-07;8!CL:0002681;9.46e-07;12!CL:0002584;9.46e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.44e-40,72;CL:0000763,3.01e-39,108;CL:0000049,3.01e-39,108;CL:0000557,1.48e-36,67;CL:0002009,1.05e-34,61;CL:0002194,4.90e-33,59;CL:0000576,4.90e-33,59;CL:0000040,4.90e-33,59;CL:0000559,4.90e-33,59;CL:0000839,1.76e-32,66;CL:0000473,9.07e-31,48;CL:0000234,9.07e-31,48;CL:0000860,1.28e-30,42;CL:0002057,1.28e-30,42;CL:0000037,1.75e-18,168;CL:0000988,7.91e-17,177;CL:0002032,8.74e-17,161;CL:0000837,8.74e-17,161;CL:0000738,1.33e-15,136;CL:0000115,1.89e-13,36;CL:0002078,2.80e-11,45;CL:0002031,1.33e-10,120;CL:0002139,3.44e-10,24;CL:0002087,5.85e-10,115;CL:0002393,8.28e-09,9;CL:0002397,8.28e-09,9;CL:1000449,1.43e-08,15;CL:1000497,6.08e-08,17;CL:0002518,6.08e-08,17;CL:0000071,8.53e-08,18;CL:0002546,8.53e-08,18;CL:0000094,1.75e-07,8;CL:0000213,1.84e-07,58;CL:0000215,1.84e-07,58;CL:0002681,7.66e-07,12;CL:0002584,7.66e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002057;4.13e-22;42!CL:0000049;4.86e-11;108!CL:0002546;1.04e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.27e-25!112;UBERON:0002390!4.50e-23!102;UBERON:0003061!4.50e-23!102;UBERON:0003081!6.04e-20!216;UBERON:0002371!2.85e-19!80;UBERON:0001474!7.76e-16!86;UBERON:0002405!1.88e-15!115;UBERON:0004765!2.62e-11!101;UBERON:0001434!2.62e-11!101;UBERON:0007023!4.98e-07!115;UBERON:0000926!9.87e-07!448;UBERON:0004120!9.87e-07!448;UBERON:0006603!9.87e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.78e-08;15!UBERON:0004819;1.78e-08;15!UBERON:0001285;1.78e-08;15!UBERON:0007684;1.78e-08;15!UBERON:0000178;7.83e-08;15!UBERON:0000179;7.83e-08;15!UBERON:0000463;7.83e-08;15!UBERON:0004638;1.04e-07;18!UBERON:0001986;1.04e-07;18!UBERON:0004852;1.04e-07;18!UBERON:0000353;3.60e-07;15!UBERON:0001225;9.46e-07;12!UBERON:0008987;9.46e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.77e-36,108;UBERON:0002390,4.85e-34,98;UBERON:0003061,4.85e-34,98;UBERON:0002405,2.89e-29,93;UBERON:0002371,5.98e-29,76;UBERON:0001474,6.95e-25,82;UBERON:0003081,1.23e-22,203;UBERON:0004765,2.43e-21,90;UBERON:0001434,9.72e-17,100;UBERON:0000926,3.89e-09,315;UBERON:0004120,3.89e-09,315;UBERON:0006603,3.89e-09,315;UBERON:0004211,1.43e-08,15;UBERON:0009773,1.43e-08,15;UBERON:0001231,1.43e-08,15;UBERON:0001285,1.43e-08,15;UBERON:0007684,1.43e-08,15;UBERON:0004208,1.43e-08,15;UBERON:0006555,1.64e-08,16;UBERON:0004819,1.64e-08,16;UBERON:0004638,8.53e-08,18;UBERON:0001986,8.53e-08,18;UBERON:0004852,8.53e-08,18;UBERON:0000178,8.67e-08,15;UBERON:0000179,8.67e-08,15;UBERON:0000463,8.67e-08,15;UBERON:0000353,3.14e-07,15;UBERON:0001225,7.66e-07,12;UBERON:0008987,7.66e-07,12 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0.737201809504527,9.07141518364156,0.873765488520689,1.84636884759917,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,11.0141997517693,3.83829398097213,9.13415127564848,4.59710612239464,3.0120591877825,7.76483421350254,0,0,0.880801318004542,8.30993112797816,11.4310335057981,11.2845652772243,4.47830948479849,1.29557466407592,1.54545340580512,33.732391396859,15.87078963493,21.3473973845278,13.248455103624,6.57868620834921,6.19412741790207,7.19230980805376,3.58624989140741,2.83778675866302,4.82643953031266,6.45484683583826,5.41705946377367,14.8711448238658,5.73102915121476,3.82029923556644,13.4676912643197,7.38136762275015,5.75403413219137,20.4507806115764,13.7629923758926,13.2129672665135,4.35313857942876,2.26954089876456,3.11411124497787,8.54245461872927,5.21482918420201,3.25783267057675,7.87019353423379,2.57794345191295,2.21523671208619,10.5627643155971,8.71677629856678,9.85395633889367,13.7040929998724,8.10955221344134,8.83990726833941,17.9558028556987,8.95125047395906,12.969154917289,0,0.546138611262131,0,0.853460445133014,0,0,0,0,0,0,0,0,1.68152568894461,0.790152254325231,0,0,0,0.668745981562712,0,0,0,1.22551502573691,0.294605907474837,0.221533894583621,0,0.640456598628376,2.34106825607781,1.64437904603676,2.76350017785848,2.02862160014537,0,0,0,1.24640276967323,0,0,0,0.637130828648193,0.651083453856419,0,0.903450714466637,0.255973222308837,1.24930726552346,0.710331756132051,0.821127996921047,0.403213486449465,1.06976078313403,0.434473211648397,0,0,0.255725123687061,0,0,0,0,0,0.378139268656271,0,0.175669571386252,2.0956652079634,4.00724817121796,1.85392221392215,4.86821090482025,6.44280028007289,5.18536046023574,15.0249093312365,5.14795419702115,11.1437250398869,5.16782259153433,2.58070378531837,4.51282652089873,1.69592382577203,3.35599548967925,2.20094433552054,4.59788926380983,5.42675194255591,2.13459757612026,3.01248551488203,6.44526907374635,0.760272105718513,12.6912269925048,2.57364156242108,2.43042584364528,4.82218532734031,3.36794058939255,3.49095589498299,0,9.49265659568129,7.5112715011467,3.9534125230819,7.75560528296651,2.61656431285521,0.496971951695318,0,0,0,0,0.560677600142307,0,0.98667019366864,0.933633106199299,0.942974704487816,0.490385709340376,0,0,0,0,1.71141546463335,0,0,0.161872944368132,0,0,0,0.309977343527296,0,0,0,0.718618141816238,0,0,0,0,0,0.300476117813194,0.680593098960126,0.358779271377724,0,0,0.900273288253207,0,0.515281080091258,0.18611685633159,0,0,0,0,0,0,0,0,3.86521706326594,1.36373060295417,1.72082757233402,0.121973706129595,0.265059536642971,0.348581828608555,0.310983165046111,0.252320850875628,0,1.56449532329816,0,1.38134921352481,0,0,0.236613600079688,0,0,0,0,0.237270619111097,0,0,0,8.11971000087113,4.20725321410337,0,0,0,0.982827216677626,0,0,0.122988438543114,0,1.64625428112938,0,1.50793458617446,0.740707561268237,0,0,0,0.115930404975077,0.117408694235822,2.88732895522148,3.70388410061289,2.09279567458058,0,0.858486162094873,2.21595305478658,1.40402559083543,2.82399208348584,0.93733833986777,3.19166043577833,0.708875486211932,1.79117045405697,3.19697332365358,8.43441894163465,0,1.14462964217194,6.63449969730471,7.49423757768199,10.0993946741104,0.063497894292169,0,0,0,0,0,0,0.560655421726804,0,0.2933531432838,0.129271715757778,3.57656445851882,1.690605505112,0.26593811658487,0,0,0,0,0.142977993658148,0,0.823240336780769,1.30294473717494,0,0.791951872933429,0,0.871533458600294,0.299918973546171,2.43247561282381,3.01354254859276,0,0,0,0,0.144781306667579,1.2328579353023,0,0.224170287987055,1.18218456121156,0.431255149719035,1.15508732651774,0,0,0,0.335032530668698,0,11.9841123831549,17.9496875522415,20.3063601583657,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0,4.13536052245775,5.1771408196468,5.33637789017222,1.81876542867756,1.66435439510497,0.907170879989041,0.744323423456331,0.460385919864187,0.280660094433074,0.384417447767103,0.511707249066704,0.64341568457443,1.48418066444991,0.308419387605311,0,0.164254312027618,0.519254429183621,0,0.241718899183244,3.60911646545913,10.681394716564,0.114814448164607,0,0,4.96319574198153,1.38627606787947,9.41219723012226,7.30696123266303,2.53323909342902,5.68666920354483,4.08224892663638,1.94324324491925,9.25363516141736,1.08378575017541,2.50844886927427,3.56826782263054,4.98645605357235,3.58199607555485,0,0.261435451024901,0.512900250232778,0,0,1.54561517471583,0,0,1.72279661398852,0,0,0,0,0,0.413509717453592,0,0,0.340906509664404,0,4.13212288402445,4.80475168412765,2.93509238737543,4.8555734810664,0,0,0.6970372701606,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,1.21856744815642,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.92947049429925,0,0.430234056612155,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0,0,2.50177493086331,2.01090682660736,6.53345909167936,1.7887322147588,2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|short_description=p3@ARHGAP27 | |||
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Revision as of 15:51, 20 January 2014
Short description: | p3@ARHGAP27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARHGAP27_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000527678_5end |
EntrezGene: | ARHGAP27 |
HGNC: | 31813 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.77e-36 | 108 |
hematopoietic system | 4.85e-34 | 98 |
blood island | 4.85e-34 | 98 |
immune system | 2.89e-29 | 93 |
bone marrow | 5.98e-29 | 76 |
bone element | 6.95e-25 | 82 |
lateral plate mesoderm | 1.23e-22 | 203 |
skeletal element | 2.43e-21 | 90 |
skeletal system | 9.72e-17 | 100 |
mesoderm | 3.89e-09 | 315 |
mesoderm-derived structure | 3.89e-09 | 315 |
presumptive mesoderm | 3.89e-09 | 315 |
nephron epithelium | 1.43e-08 | 15 |
renal tubule | 1.43e-08 | 15 |
nephron tubule | 1.43e-08 | 15 |
nephron | 1.43e-08 | 15 |
uriniferous tubule | 1.43e-08 | 15 |
nephrogenic mesenchyme | 1.43e-08 | 15 |
excretory tube | 1.64e-08 | 16 |
kidney epithelium | 1.64e-08 | 16 |
blood vessel endothelium | 8.53e-08 | 18 |
endothelium | 8.53e-08 | 18 |
cardiovascular system endothelium | 8.53e-08 | 18 |
blood | 8.67e-08 | 15 |
haemolymphatic fluid | 8.67e-08 | 15 |
organism substance | 8.67e-08 | 15 |
parenchyma | 3.14e-07 | 15 |
cortex of kidney | 7.66e-07 | 12 |
renal parenchyma | 7.66e-07 | 12 |