FFCP PHASE1:Hg19::chr18:47339882..47339910,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10449 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=83 | |||
|TSSclassifier=strong | |||
|UniProt=B3KNP8,P42765 | |||
|association_with_transcript=340bp_to_NM_006111,uc002ldw.3_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_ACAA2_5end | |||
|id=chr18:47339882..47339910,- | |||
|ontology_enrichment_celltype=CL:0000055!9.67e-11!180;CL:0000136!4.09e-09!15;CL:0000034!5.68e-08!444;CL:0000048!7.00e-08!430;CL:0000723!1.30e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.46e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.08e-09,15;CL:0000034,1.35e-07,441;CL:0000048,1.64e-07,427;CL:0000723,3.01e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.05e-08!167;UBERON:0007100!1.35e-07!27;UBERON:0000914!1.47e-07!83;UBERON:0002329!1.47e-07!83;UBERON:0003077!1.47e-07!83;UBERON:0003059!1.47e-07!83;UBERON:0007282!1.47e-07!83;UBERON:0009618!1.47e-07!83;UBERON:0007285!1.47e-07!83;UBERON:0002385!3.67e-07!63;UBERON:0001015!3.67e-07!63;UBERON:0000383!3.67e-07!63;UBERON:0001737!4.66e-07!9;UBERON:0004290!6.00e-07!70;UBERON:0001134!8.37e-07!61;UBERON:0002036!8.37e-07!61;UBERON:0003082!8.37e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.63e-07;9!UBERON:0001557;4.63e-07;9!UBERON:0007100;4.81e-07;25!UBERON:0002385;4.91e-07;31!UBERON:0001015;4.91e-07;31!UBERON:0000383;4.91e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.34e-08,167;UBERON:0007100,1.35e-07,27;UBERON:0002385,2.70e-07,64;UBERON:0001015,2.70e-07,64;UBERON:0000383,2.70e-07,64;UBERON:0002329,4.44e-07,71;UBERON:0003059,4.44e-07,71;UBERON:0007282,4.44e-07,71;UBERON:0004290,4.44e-07,71;UBERON:0009618,4.44e-07,71;UBERON:0001737,4.66e-07,9;UBERON:0001134,6.18e-07,62;UBERON:0002036,6.18e-07,62;UBERON:0003082,6.18e-07,62;UBERON:0003077,6.63e-07,72;UBERON:0007285,6.63e-07,72;UBERON:0007524,7.02e-07,73 | |||
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| |||
|short_description=p1@ACAA2 | |||
}} |
Revision as of 19:20, 20 January 2014
Short description: | p1@ACAA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACAA2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 340bp_to_NM_006111, uc002ldw.3_5end |
EntrezGene: | ACAA2 |
HGNC: | 83 |
UniProt: | B3KNP8P42765 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.08e-09 | 15 |
stem cell | 1.35e-07 | 441 |
multi fate stem cell | 1.64e-07 | 427 |
somatic stem cell | 3.01e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.34e-08 | 167 |
primary circulatory organ | 1.35e-07 | 27 |
muscle tissue | 2.70e-07 | 64 |
musculature | 2.70e-07 | 64 |
musculature of body | 2.70e-07 | 64 |
somite | 4.44e-07 | 71 |
presomitic mesoderm | 4.44e-07 | 71 |
presumptive segmental plate | 4.44e-07 | 71 |
dermomyotome | 4.44e-07 | 71 |
trunk paraxial mesoderm | 4.44e-07 | 71 |
larynx | 4.66e-07 | 9 |
skeletal muscle tissue | 6.18e-07 | 62 |
striated muscle tissue | 6.18e-07 | 62 |
myotome | 6.18e-07 | 62 |
paraxial mesoderm | 6.63e-07 | 72 |
presumptive paraxial mesoderm | 6.63e-07 | 72 |
dense mesenchyme tissue | 7.02e-07 | 73 |