FFCP PHASE1:Hg19::chr19:3061441..3061460,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=307 | |||
|TSSclassifier=strong | |||
|UniProt=Q08117 | |||
|association_with_transcript=-195bp_to_X73358_5end | |||
|description=CAGE_peak_11_at_AES_5end | |||
|id=chr19:3061441..3061460,- | |||
|ontology_enrichment_celltype=CL:0000055!9.10e-17!180;CL:0000192!4.07e-14!42;CL:0000514!4.07e-14!42;CL:0000393!2.10e-12!60;CL:0000211!2.10e-12!60;CL:0000183!3.39e-12!59;CL:0000359!1.26e-11!32;CL:0000187!2.29e-11!54;CL:0000680!4.30e-11!57;CL:0000056!4.30e-11!57;CL:0000355!4.30e-11!57;CL:0000057!3.97e-08!75;CL:0000222!3.36e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.85e-13;32!CL:0000192;8.96e-12;43!CL:0002539;1.30e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.80e-15,43;CL:0000514,1.80e-15,43;CL:0000359,2.17e-13,32;CL:0000393,2.66e-11,61;CL:0000211,2.66e-11,61;CL:0000187,4.59e-11,55;CL:0000680,1.44e-10,58;CL:0000056,1.44e-10,58;CL:0000355,1.44e-10,58;CL:0000222,1.17e-07,121;CL:0002539,1.99e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;8.96e-12;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.85e-13!83;UBERON:0002329!1.85e-13!83;UBERON:0003077!1.85e-13!83;UBERON:0003059!1.85e-13!83;UBERON:0007282!1.85e-13!83;UBERON:0009618!1.85e-13!83;UBERON:0007285!1.85e-13!83;UBERON:0001637!1.28e-12!42;UBERON:0003509!1.28e-12!42;UBERON:0004572!1.28e-12!42;UBERON:0000486!1.69e-12!82;UBERON:0004290!4.56e-12!70;UBERON:0000475!2.09e-11!365;UBERON:0002385!6.08e-11!63;UBERON:0001015!6.08e-11!63;UBERON:0000383!6.08e-11!63;UBERON:0001134!6.77e-11!61;UBERON:0002036!6.77e-11!61;UBERON:0003082!6.77e-11!61;UBERON:0004573!1.83e-10!33;UBERON:0004571!1.83e-10!33;UBERON:0002100!8.78e-09!216;UBERON:0001981!7.64e-08!60;UBERON:0007500!7.64e-08!60;UBERON:0004537!7.64e-08!60;UBERON:0006965!7.64e-08!60;UBERON:0002049!2.17e-07!79;UBERON:0007798!2.17e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.55e-12;33!UBERON:0004571;7.55e-12;33!UBERON:0001637;1.02e-10;42!UBERON:0003509;1.02e-10;42!UBERON:0004572;1.02e-10;42!UBERON:0004237;1.30e-07;10!UBERON:0004695;1.30e-07;10!UBERON:0002111;1.30e-07;10!UBERON:0004178;1.30e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.23e-15,42;UBERON:0003509,7.23e-15,42;UBERON:0004572,7.23e-15,42;UBERON:0004573,1.61e-12,33;UBERON:0004571,1.61e-12,33;UBERON:0000486,1.66e-11,83;UBERON:0002329,1.67e-11,71;UBERON:0003059,1.67e-11,71;UBERON:0007282,1.67e-11,71;UBERON:0004290,1.67e-11,71;UBERON:0009618,1.67e-11,71;UBERON:0007503,2.04e-11,78;UBERON:0003077,3.69e-11,72;UBERON:0007285,3.69e-11,72;UBERON:0007524,7.96e-11,73;UBERON:0002385,9.17e-11,64;UBERON:0001015,9.17e-11,64;UBERON:0000383,9.17e-11,64;UBERON:0001134,1.46e-10,62;UBERON:0002036,1.46e-10,62;UBERON:0003082,1.46e-10,62;UBERON:0007500,4.13e-09,59;UBERON:0001981,4.13e-09,59;UBERON:0004537,4.13e-09,59;UBERON:0006965,4.13e-09,59;UBERON:0002049,9.76e-09,78;UBERON:0007798,9.76e-09,78;UBERON:0000055,3.63e-08,68;UBERON:0005256,5.87e-08,122;UBERON:0002100,7.42e-08,199;UBERON:0004237,1.99e-07,10;UBERON:0004695,1.99e-07,10;UBERON:0002111,1.99e-07,10;UBERON:0004178,1.99e-07,10;UBERON:0000490,7.87e-07,148 | |||
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| |||
|short_description=p11@AES | |||
}} |
Revision as of 20:28, 20 January 2014
Short description: | p11@AES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_AES_5end |
Coexpression cluster: | NA |
Association with transcript: | -195bp_to_X73358_5end |
EntrezGene: | AES |
HGNC: | 307 |
UniProt: | Q08117 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.80e-15 | 43 |
smooth muscle myoblast | 1.80e-15 | 43 |
vascular associated smooth muscle cell | 2.17e-13 | 32 |
electrically responsive cell | 2.66e-11 | 61 |
electrically active cell | 2.66e-11 | 61 |
muscle cell | 4.59e-11 | 55 |
muscle precursor cell | 1.44e-10 | 58 |
myoblast | 1.44e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.44e-10 | 58 |
mesodermal cell | 1.17e-07 | 121 |
aortic smooth muscle cell | 1.99e-07 | 10 |