FFCP PHASE1:Hg19::chr19:11660615..11660641,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2078 | |||
|description=CAGE_peak_at_chr19:11660615..11660641,+ | |||
|id=chr19:11660615..11660641,+ | |||
|ontology_enrichment_celltype=CL:0002615!2.32e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002616;1.23e-08;1!CL:0000511;2.55e-08;1!CL:0002625;2.55e-08;1!CL:0000216;2.55e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,1.18e-08,1;CL:0000511,2.29e-08,1;CL:0002625,2.29e-08,1;CL:0000216,2.29e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.66e-16;2!UBERON:0009143;8.14e-09;1!UBERON:0005754;1.23e-08;1!UBERON:0004874;1.23e-08;1!UBERON:0010227;2.55e-08;1!UBERON:0006242;2.55e-08;1!UBERON:0006603;3.32e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;2.55e-08;1!DOID:3571;2.55e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.46e-08,1;DOID:3571,3.53e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.52e-12!115;UBERON:0003135!8.15e-12!11;UBERON:0005904!1.57e-09!4;UBERON:0003101!2.16e-09!22;UBERON:0000079!2.16e-09!22;UBERON:0003688!4.78e-09!6;UBERON:0002358!4.78e-09!6;UBERON:0003684!4.78e-09!6;UBERON:0001178!4.78e-09!6;UBERON:0005156!1.15e-08!59;UBERON:0000990!1.15e-08!59;UBERON:0003133!3.10e-08!48;UBERON:0003886!5.80e-08!63;UBERON:0002323!8.64e-08!46;UBERON:0006947!1.40e-07!3;UBERON:0004054!1.40e-07!3;UBERON:0002553!1.49e-07!70;UBERON:0004458!4.52e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;6.91e-17;4!UBERON:0003135;1.76e-16;11!UBERON:0003101;2.20e-11;22!UBERON:0000079;2.20e-11;22!UBERON:0006947;8.45e-11;3!UBERON:0004054;8.45e-11;3!UBERON:0000059;1.22e-10;11!UBERON:0000160;9.32e-10;17!UBERON:0001301;8.14e-09;1!UBERON:0000473;9.51e-09;8!UBERON:0000989;1.23e-08;1!UBERON:0000998;1.23e-08;1!UBERON:0008811;1.23e-08;1!UBERON:0006868;1.23e-08;1!UBERON:0002079;2.55e-08;1!UBERON:0006834;2.55e-08;1!UBERON:0001136;2.55e-08;1!UBERON:0001343;2.55e-08;1!UBERON:0004910;2.55e-08;1!UBERON:0004813;2.55e-08;1!UBERON:0002323;4.84e-08;45!UBERON:0001155;8.73e-08;9!UBERON:0005409;1.37e-07;22!UBERON:0004921;3.42e-07;33!UBERON:0000058;4.74e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,6.56e-17,4;UBERON:0003135,1.62e-16,11;UBERON:0007023,4.19e-15,114;UBERON:0003101,1.86e-11,22;UBERON:0000079,1.86e-11,22;UBERON:0006947,8.67e-11,3;UBERON:0004054,8.67e-11,3;UBERON:0004876,8.91e-11,11;UBERON:0000059,9.14e-11,11;UBERON:0000160,7.72e-10,17;UBERON:0003886,2.05e-09,54;UBERON:0003064,6.78e-09,28;UBERON:0002323,6.89e-09,46;UBERON:0001301,8.15e-09,1;UBERON:0000473,9.27e-09,8;UBERON:0000989,1.10e-08,1;UBERON:0008811,1.10e-08,1;UBERON:0006258,1.10e-08,1;UBERON:0005876,1.10e-08,1;UBERON:0004874,1.10e-08,1;UBERON:0000998,1.27e-08,1;UBERON:0006868,1.27e-08,1;UBERON:0003133,1.49e-08,48;UBERON:0005156,1.56e-08,59;UBERON:0000990,1.56e-08,59;UBERON:0006834,1.98e-08,1;UBERON:0001136,2.29e-08,1;UBERON:0001343,2.29e-08,1;UBERON:0004910,2.29e-08,1;UBERON:0005154,2.29e-08,1;UBERON:0005295,2.29e-08,1;UBERON:0004813,2.29e-08,1;UBERON:0005297,2.29e-08,1;UBERON:0005294,2.29e-08,1;UBERON:0010141,2.29e-08,1;UBERON:0005891,2.29e-08,1;UBERON:0002079,2.64e-08,1;UBERON:0004458,2.82e-08,49;UBERON:0002553,3.55e-08,61;UBERON:0001155,7.41e-08,9;UBERON:0005409,9.60e-07,25 | |||
|phase1_expression=0.181678379270557,0,0.563817616383885,3.00219895059391,0.893922188854576,2.61701557230111,2.53299878168311,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0.194874010322397,0.252433774244115,0,0,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06375246633948,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,1.02341449813341,0.482561763430822,0,0.308419387605311,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,2.19172787076177,0.828851746593443,0,0,0,1.55519793830904,0,0,0,9.17383672423483,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38581137416707,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,3.00755719311353,1.83309043480088,0,0,0,0,0,0,0,0,0,0.789168805698781,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31980669659857,0,0,0,0,3.4916045935831,0.441280633457501,0,0,0,0.0633107959558787,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0,0,0.669514372325618,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,1.42939065274673,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12815492523886,0,0,0,0,0,0,0,0,0,0,0.548257766857182,2.97726707033577,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,1.88383422841234,0,0,1.82631744101899,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,2.54032230114557,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,1.31196068783506,0.437119121007915,0,4.90296643507811,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,5.53184496993148,0.535928260312357,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.430333232356058,0.332660356546013,0,0,0,0,0,1.71138021856013,0.813792356631477,0,0.805095174364105,0 | |||
|short_description=p@chr19:11660615..11660641,+ | |||
}} |
Revision as of 21:25, 20 January 2014
Short description: | p@chr19:11660615..11660641, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:11660615..11660641, + |
Coexpression cluster: | C2078_epididymis_testis_bladder_esophagus_Adipocyte_cervix_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 1.18e-08 | 1 |
androgen binding protein secreting cell | 2.29e-08 | 1 |
seminiferous tubule epithelial cell | 2.29e-08 | 1 |
Sertoli cell | 2.29e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.46e-08 | 1 |
liver cancer | 3.53e-08 | 1 |