FFCP PHASE1:Hg19::chr19:45116868..45116882,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147710 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=40040 | |||
|TSSclassifier=strong | |||
|UniProt=A1L1A6 | |||
|association_with_transcript=-57bp_to_ENST00000402988,NM_001205280_5end | |||
|coexpression_cluster_id=C304 | |||
|description=CAGE_peak_2_at_IGSF23_5end | |||
|id=chr19:45116868..45116882,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.37e-31!12;CL:0000417!3.37e-31!12;CL:0000668!3.37e-31!12;CL:0000414!3.37e-31!12;CL:0000412!3.37e-31!12;CL:0000182!3.37e-31!12;CL:0000223!1.65e-11!59;CL:0002563!1.21e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.19e-37;12!CL:0000047;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.98e-37,12;CL:0000223,5.81e-10,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.75e-28;11!UBERON:0009497;1.27e-23;13!UBERON:0001041;3.07e-10;30!UBERON:0003104;6.75e-10;31!CL:0000223;7.01e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.08e-32!19;UBERON:0006925!5.08e-32!19;UBERON:0008836!5.08e-32!19;UBERON:0008835!1.77e-27!22;UBERON:0003894!1.77e-27!22;UBERON:0009854!3.16e-26!23;UBERON:0007499!5.04e-24!25;UBERON:0009497!5.04e-24!25;UBERON:0000015!5.04e-24!25;UBERON:0002423!5.04e-24!25;UBERON:0006235!5.04e-24!25;UBERON:0004161!5.04e-24!25;UBERON:0005057!4.76e-23!26;UBERON:0009856!4.76e-23!26;UBERON:0002365!4.07e-19!31;UBERON:0002330!4.07e-19!31;UBERON:0003929!1.44e-18!54;UBERON:0002368!8.87e-17!35;UBERON:0000160!2.09e-16!27;UBERON:0004921!6.24e-16!129;UBERON:0004185!6.24e-16!129;UBERON:0000949!9.52e-13!45;UBERON:0001007!1.01e-12!155;UBERON:0001555!1.01e-12!155;UBERON:0007026!1.01e-12!155;UBERON:0005409!1.58e-12!35;UBERON:0005172!1.60e-12!55;UBERON:0005173!1.60e-12!55;UBERON:0002530!1.44e-11!59;UBERON:0005911!1.66e-11!82;UBERON:0004119!2.12e-11!169;UBERON:0000925!2.12e-11!169;UBERON:0006595!2.12e-11!169;UBERON:0000059!3.00e-11!11;UBERON:0002417!3.95e-11!61;UBERON:0000916!3.95e-11!61;UBERON:0001242!1.21e-08!4;UBERON:0001262!1.21e-08!4;UBERON:0004786!1.21e-08!4;UBERON:0004808!1.21e-08!4;UBERON:0001277!1.21e-08!4;UBERON:0001052!1.70e-08!4;UBERON:0001155!3.92e-08!9;UBERON:0003350!4.43e-07!5;UBERON:0004907!5.82e-07!5;UBERON:0005177!6.85e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.25e-41;19!UBERON:0006925;8.25e-41;19!UBERON:0002423;7.21e-31;25!UBERON:0002365;5.05e-25;31!UBERON:0002330;5.05e-25;31!UBERON:0002368;1.28e-20;33!UBERON:0000949;1.68e-15;43!UBERON:0001007;2.23e-11;81!UBERON:0000160;3.11e-11;17!UBERON:0002108;7.88e-11;4!UBERON:0005172;4.04e-10;52!UBERON:0005173;4.04e-10;52!UBERON:0002417;4.56e-09;58!UBERON:0000916;4.56e-09;58!UBERON:0005409;7.67e-09;22!UBERON:0002530;4.45e-08;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.73e-41,19;UBERON:0006925,5.73e-41,19;UBERON:0008836,5.73e-41,19;UBERON:0008835,2.67e-35,22;UBERON:0003894,2.67e-35,22;UBERON:0009854,9.74e-34,23;UBERON:0007499,5.47e-31,25;UBERON:0009497,5.47e-31,25;UBERON:0000015,5.47e-31,25;UBERON:0002423,5.47e-31,25;UBERON:0006235,5.47e-31,25;UBERON:0004161,5.47e-31,25;UBERON:0009856,9.01e-30,26;UBERON:0002365,7.32e-25,31;UBERON:0002330,7.32e-25,31;UBERON:0002368,6.10e-22,35;UBERON:0003929,1.16e-17,54;UBERON:0000949,6.66e-17,45;UBERON:0005172,5.87e-14,54;UBERON:0005173,5.87e-14,54;UBERON:0004921,1.75e-13,118;UBERON:0002530,1.04e-12,59;UBERON:0002417,1.75e-12,60;UBERON:0000916,1.75e-12,60;UBERON:0005911,2.73e-11,82;UBERON:0000160,3.66e-11,17;UBERON:0002108,9.62e-11,4;UBERON:0001007,1.05e-10,145;UBERON:0001555,1.05e-10,145;UBERON:0007026,1.05e-10,145;UBERON:0004119,1.46e-09,160;UBERON:0000925,1.46e-09,160;UBERON:0006595,1.46e-09,160;UBERON:0011216,5.44e-09,223;UBERON:0001041,2.37e-08,87;UBERON:0005409,8.50e-08,25;UBERON:0005177,4.49e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,1.96565443335525,2.36315962672562,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29731237272711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,1.14994833854341,0.611030144933625,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,1.49688046383725,0.494495150286999,1.41547442093788,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,1.23478652972711,1.31135736302374,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@IGSF23 | |||
}} |
Revision as of 23:45, 20 January 2014
Short description: | p2@IGSF23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IGSF23_5end |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | -57bp_to_ENST00000402988, NM_001205280_5end |
EntrezGene: | IGSF23 |
HGNC: | 40040 |
UniProt: | A1L1A6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.98e-37 | 12 |
endodermal cell | 5.81e-10 | 58 |