FFCP PHASE1:Hg19::chr19:45252008..45252024,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=602 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=998 | |||
|TSSclassifier=strong | |||
|UniProt=P20749 | |||
|association_with_transcript=30bp_to_NM_005178,uc010xxe.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_BCL3_5end | |||
|id=chr19:45252008..45252024,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.12e-32!140;CL:0000766!4.54e-25!76;CL:0002057!8.68e-25!42;CL:0002087!8.92e-24!119;CL:0002031!1.51e-22!124;CL:0000860!1.98e-21!45;CL:0000557!3.76e-21!71;CL:0002009!1.10e-20!65;CL:0002194!1.64e-19!63;CL:0000576!1.64e-19!63;CL:0000040!1.64e-19!63;CL:0000559!1.64e-19!63;CL:0000988!1.76e-18!182;CL:0000839!3.15e-18!70;CL:0000037!5.73e-18!172;CL:0000566!5.73e-18!172;CL:0002032!1.94e-16!165;CL:0000837!1.94e-16!165;CL:0000763!1.10e-11!112;CL:0000049!1.10e-11!112;CL:0000094!9.81e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-19;33!CL:0002057;1.04e-19;33!CL:0000473;5.79e-18;39!CL:0000234;5.79e-18;39!CL:0000576;7.75e-15;48!CL:0000766;1.21e-12;69!CL:0002087;4.39e-09;104!CL:0000738;4.44e-08;136!CL:0000094;6.23e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.79e-35,136;CL:0000766,2.13e-28,72;CL:0000473,3.39e-27,48;CL:0000234,3.39e-27,48;CL:0002087,4.00e-26,115;CL:0000860,1.59e-25,42;CL:0002057,1.59e-25,42;CL:0002031,5.77e-25,120;CL:0000557,3.67e-24,67;CL:0002009,6.32e-24,61;CL:0002194,1.16e-22,59;CL:0000576,1.16e-22,59;CL:0000040,1.16e-22,59;CL:0000559,1.16e-22,59;CL:0000839,2.82e-21,66;CL:0000988,7.38e-21,177;CL:0000037,5.37e-20,168;CL:0002032,2.98e-18,161;CL:0000837,2.98e-18,161;CL:0000763,1.64e-13,108;CL:0000049,1.64e-13,108;CL:0000094,6.71e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;9.39e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.16e-28!112;UBERON:0002390!1.21e-26!102;UBERON:0003061!1.21e-26!102;UBERON:0002405!5.14e-20!115;UBERON:0003081!2.32e-19!216;UBERON:0002371!5.67e-19!80;UBERON:0001474!6.25e-16!86;UBERON:0000926!4.08e-13!448;UBERON:0004120!4.08e-13!448;UBERON:0006603!4.08e-13!448;UBERON:0002204!3.28e-12!167;UBERON:0004765!5.96e-12!101;UBERON:0001434!5.96e-12!101;UBERON:0000178!6.30e-08!15;UBERON:0000179!6.30e-08!15;UBERON:0000463!6.30e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.21e-08;15!UBERON:0000179;4.21e-08;15!UBERON:0000463;4.21e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.29e-31,108;UBERON:0002390,1.43e-29,98;UBERON:0003061,1.43e-29,98;UBERON:0002405,1.40e-24,93;UBERON:0002371,1.64e-21,76;UBERON:0003081,2.89e-18,203;UBERON:0001474,4.12e-18,82;UBERON:0004765,2.68e-17,90;UBERON:0001434,3.63e-14,100;UBERON:0002204,4.07e-14,167;UBERON:0000926,1.89e-11,315;UBERON:0004120,1.89e-11,315;UBERON:0006603,1.89e-11,315;UBERON:0000178,3.95e-08,15;UBERON:0000179,3.95e-08,15;UBERON:0000463,3.95e-08,15 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,2.00146596706261,0,0,0,1.26343974685366,1.56711376919903,2.21160542851358,6.28021051175185,0.655324116390517,0.527533956456907,2.47532705920093,3.31397375727916,5.3786011716142,0.602694528023977,0.730310090387373,1.46379839637152,1.72369481307503,1.42800483870977,4.07491137921514,0.572471974262113,1.50561867580173,1.88313959392204,18.2628039737604,19.1294373418374,15.5847347001085,68.4453841717093,25.7165696725133,101.869009141978,2.75826367343678,4.819294700452,9.24385025416969,0.697204805222715,4.40724620711007,3.81680571135301,145.700792443884,165.850258057807,126.517337627342,9.62836539231675,4.85840499028469,7.21211589375722,26.1716829803216,28.3406957766607,35.4172729334212,84.8365984705749,48.5178107865754,45.5268365215802,71.6354056882155,65.3209801649207,48.0058926673828,59.641002767435,54.8661981046252,58.233389235567,83.5795987569165,52.3979808111064,38.8771628089996,97.334677773947,65.148592496447,76.7204550958849,52.4463567296879,56.8471424221651,50.2945205628579,147.426293223321,91.3490211752735,108.993893574226,44.2197650851868,40.1541847183555,34.5330263081135,88.9937268871052,63.3437533898611,69.3052628495537,13.5203383239643,27.0007460955605,17.1920089316868,24.03832706535,31.3869706038748,21.6979542041058,9.12040779971995,6.96208370196815,6.02791707423292,5.27988733383968,5.46138611262132,4.44754626931777,5.54749289336459,6.00593980554019,5.74752439954483,7.27149360063348,7.63243003628291,29.0298614245819,72.8174114819964,50.8423393406554,48.9033915742396,70.6240789356735,0.526768169550154,4.13090517239049,8.25322601773246,8.01845846098086,1.00311897234407,1.30368906653436,1.4203434172042,0,4.56782873229212,3.24066498222321,4.43067789167242,1.08321545506006,4.99556146930133,8.9740949816316,4.1109476150919,3.03985019564433,4.63684937176084,0.444859689486181,0.267540828089713,0,2.26618685395132,1.91610246800961,1.71813722741315,1.51811815211702,0.637130828648193,0,0.950452044448374,1.20460095262218,0.76791966692651,1.24930726552346,2.36777252044017,1.64225599384209,13.5076517960571,21.1277754668971,8.97911304073354,0,5.36560687762909,3.83587685530591,1.44575660953827,3.00802746381534,8.25625158076695,0.795285947051099,21.411934293316,2.9305793320861,0.665188192387692,0.527008714158756,6.15601654839249,5.46442932438813,5.19098219898201,2.59637914923747,6.61693001737215,5.7171923023112,29.8113280381677,34.8916895575878,21.9159925784443,0.79504962946682,0.860234595106124,2.08284300964557,1.13061588384802,2.51699661725944,1.6507082516404,2.08994966536811,2.06733407335463,1.42306505074684,1.67360306382335,4.43112248820062,1.52054421143703,2.68468263302986,1.47065232138347,1.62028389576352,1.69669483739752,2.69435247151404,2.81528701208306,1.53316637465883,0.949265659568129,1.09921046358244,652.313066308513,864.749989050766,2.18047026071267,2.98183171017191,1.01304409331664,1.98613771219828,0,1.06400514659507,2.24271040056923,1.06748995729705,2.71334303258876,2.17847724779836,6.06198024313596,2.28846664358842,1.96764655938411,1.15235184896,6.09235722767871,0.312160076830321,0,1.64393548606981,1.40921398372518,1.78060238804945,0.702254033511242,0.204154171254893,0.61417158655884,2.9964476540972,5.94001428641027,3.70900393917835,7.28129089550421,25.8702531053846,0.336672227908132,0.750711119231785,0.277064115484183,0,1.22595118319608,3.90618953157152,1.02088964844019,0,1.06778694409284,1.90738711043606,0,0.92747276314595,0.772921620136887,0.558350568994769,0,0.779496041289589,0,0.920498986422993,2.90962902273861,0.355009592516614,0.503760491138201,1.69560592310488,1.54608682530637,3.81844568827169,1.14721838155602,0.121973706129595,0,0.232387885739037,0.310983165046111,0,0,7.8224766164908,7.71889125831462,4.14404764057442,6.96551892047969,0.721879481669586,2.12952240071719,1.34867752062481,2.41011029883482,2.53676137284506,2.39667388501647,1.66089433377768,1.34831308160164,0.588664395376038,0.769494313892781,1.4763109092493,2.80483547606892,4.9388881359768,4.41026134156626,7.60530208930985,0,4.13552934676983,0,2.33678033231916,0.514703430895577,0.658501712451753,3.37205259772859,0.904760751704678,4.0738915869753,4.88712457965487,1.03993478527958,2.88662684050547,1.507095264676,0.821860859650752,9.23945265670872,21.2973335785241,10.2737242206683,3.1608175918371,0,7.38651018262192,4.91408956792399,12.3363864699644,0,1.34385702559088,1.84307626415102,2.32852159027406,2.61570544662566,2.30029607499127,0.492663237895943,1.84901711427775,63.649731471017,92.3808901402723,41.4075181638526,0,0.381988425558278,0,0,0.102827492703324,0,0.571652865261156,0.560655421726804,0.43596006883328,0.07333828582095,2.45616259939778,10.7296933755565,4.22651376278,0.797814349754612,1.04007436911366,1.28603687131071,1.41849132023278,0.266422179016099,2.14466990487221,8.68194568626309,1.64648067356154,1.95441710576241,1.06617584622764,5.543663110534,2.1100756394171,2.61460037580088,2.49932477955143,20.6760427090024,13.5609414686674,6.32501818449095,0.239624855491583,1.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| |||
|short_description=p2@BCL3 | |||
}} |
Revision as of 23:47, 20 January 2014
Short description: | p2@BCL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BCL3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 30bp_to_NM_005178, uc010xxe.1_5end |
EntrezGene: | BCL3 |
HGNC: | 998 |
UniProt: | P20749 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.79e-35 | 136 |
myeloid leukocyte | 2.13e-28 | 72 |
defensive cell | 3.39e-27 | 48 |
phagocyte | 3.39e-27 | 48 |
nongranular leukocyte | 4.00e-26 | 115 |
classical monocyte | 1.59e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.59e-25 | 42 |
hematopoietic lineage restricted progenitor cell | 5.77e-25 | 120 |
granulocyte monocyte progenitor cell | 3.67e-24 | 67 |
macrophage dendritic cell progenitor | 6.32e-24 | 61 |
monopoietic cell | 1.16e-22 | 59 |
monocyte | 1.16e-22 | 59 |
monoblast | 1.16e-22 | 59 |
promonocyte | 1.16e-22 | 59 |
myeloid lineage restricted progenitor cell | 2.82e-21 | 66 |
hematopoietic cell | 7.38e-21 | 177 |
hematopoietic stem cell | 5.37e-20 | 168 |
hematopoietic oligopotent progenitor cell | 2.98e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.98e-18 | 161 |
myeloid cell | 1.64e-13 | 108 |
common myeloid progenitor | 1.64e-13 | 108 |
granulocyte | 6.71e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.29e-31 | 108 |
hematopoietic system | 1.43e-29 | 98 |
blood island | 1.43e-29 | 98 |
immune system | 1.40e-24 | 93 |
bone marrow | 1.64e-21 | 76 |
lateral plate mesoderm | 2.89e-18 | 203 |
bone element | 4.12e-18 | 82 |
skeletal element | 2.68e-17 | 90 |
skeletal system | 3.63e-14 | 100 |
musculoskeletal system | 4.07e-14 | 167 |
mesoderm | 1.89e-11 | 315 |
mesoderm-derived structure | 1.89e-11 | 315 |
presumptive mesoderm | 1.89e-11 | 315 |
blood | 3.95e-08 | 15 |
haemolymphatic fluid | 3.95e-08 | 15 |
organism substance | 3.95e-08 | 15 |