FFCP PHASE1:Hg19::chr19:54376953..54376990,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91663 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7544 | |||
|TSSclassifier=strong | |||
|UniProt=Q96S97 | |||
|association_with_transcript=-5bp_to_AK027693_5end | |||
|coexpression_cluster_id=C482 | |||
|description=CAGE_peak_9_at_MYADM_5end | |||
|id=chr19:54376953..54376990,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.68e-16!42;CL:0000860!2.17e-13!45;CL:0000048!6.23e-11!430;CL:0000723!5.05e-10!436;CL:0000766!1.09e-09!76;CL:0000034!1.29e-09!444;CL:0000557!6.52e-09!71;CL:0000183!5.60e-08!59;CL:0000359!6.34e-08!32;CL:0000839!6.49e-08!70;CL:0000192!7.13e-08!42;CL:0000514!7.13e-08!42;CL:0002009!1.35e-07!65;CL:0000222!2.32e-07!119;CL:0000680!3.22e-07!57;CL:0000056!3.22e-07!57;CL:0000355!3.22e-07!57;CL:0000187!3.59e-07!54;CL:0002194!3.96e-07!63;CL:0000576!3.96e-07!63;CL:0000040!3.96e-07!63;CL:0000559!3.96e-07!63;CL:0000144!8.15e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.36e-22;33!CL:0002057;6.36e-22;33!CL:0000473;1.83e-14;39!CL:0000234;1.83e-14;39!CL:0000576;1.47e-09;48!CL:0000766;7.24e-09;69!CL:0000359;2.00e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.69e-18,42;CL:0002057,3.69e-18,42;CL:0000473,1.20e-14,48;CL:0000234,1.20e-14,48;CL:0000766,1.11e-13,72;CL:0000557,1.94e-12,67;CL:0000048,3.99e-12,427;CL:0000723,2.12e-11,433;CL:0000839,2.33e-11,66;CL:0000034,1.27e-10,441;CL:0002009,1.74e-10,61;CL:0002194,7.00e-10,59;CL:0000576,7.00e-10,59;CL:0000040,7.00e-10,59;CL:0000559,7.00e-10,59;CL:0000359,3.09e-08,32;CL:0000134,5.09e-08,354;CL:0002320,1.45e-07,361;CL:0000192,3.94e-07,43;CL:0000514,3.94e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002057;4.50e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.86e-18!216;UBERON:0000926!9.56e-14!448;UBERON:0004120!9.56e-14!448;UBERON:0006603!9.56e-14!448;UBERON:0002204!5.75e-13!167;UBERON:0003914!3.23e-12!118;UBERON:0001981!2.84e-11!60;UBERON:0007500!2.84e-11!60;UBERON:0004537!2.84e-11!60;UBERON:0006965!2.84e-11!60;UBERON:0004872!8.56e-11!84;UBERON:0001637!1.55e-10!42;UBERON:0003509!1.55e-10!42;UBERON:0004572!1.55e-10!42;UBERON:0000055!6.89e-10!69;UBERON:0004535!4.32e-09!110;UBERON:0001009!4.84e-09!113;UBERON:0002049!1.73e-08!79;UBERON:0007798!1.73e-08!79;UBERON:0005256!2.57e-08!143;UBERON:0004573!2.88e-08!33;UBERON:0004571!2.88e-08!33;UBERON:0002371!5.87e-08!80;UBERON:0004290!7.91e-08!70;UBERON:0002385!2.46e-07!63;UBERON:0001015!2.46e-07!63;UBERON:0000383!2.46e-07!63;UBERON:0001134!3.04e-07!61;UBERON:0002036!3.04e-07!61;UBERON:0003082!3.04e-07!61;UBERON:0000486!3.69e-07!82;UBERON:0000468!5.91e-07!659;UBERON:0000914!7.80e-07!83;UBERON:0002329!7.80e-07!83;UBERON:0003077!7.80e-07!83;UBERON:0003059!7.80e-07!83;UBERON:0007282!7.80e-07!83;UBERON:0009618!7.80e-07!83;UBERON:0007285!7.80e-07!83;UBERON:0001474!9.14e-07!86;UBERON:0000467!9.20e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.60e-08;42!UBERON:0003509;2.60e-08;42!UBERON:0004572;2.60e-08;42!UBERON:0004573;3.96e-08;33!UBERON:0004571;3.96e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.00e-23,315;UBERON:0004120,2.00e-23,315;UBERON:0006603,2.00e-23,315;UBERON:0003081,4.36e-21,203;UBERON:0002204,2.49e-13,167;UBERON:0001637,5.95e-12,42;UBERON:0003509,5.95e-12,42;UBERON:0004572,5.95e-12,42;UBERON:0003914,1.86e-11,117;UBERON:0007500,2.22e-11,59;UBERON:0001981,2.22e-11,59;UBERON:0004537,2.22e-11,59;UBERON:0006965,2.22e-11,59;UBERON:0002371,6.47e-11,76;UBERON:0004872,4.05e-10,83;UBERON:0001474,1.82e-09,82;UBERON:0000055,2.44e-09,68;UBERON:0004573,3.03e-09,33;UBERON:0004571,3.03e-09,33;UBERON:0007503,3.59e-08,78;UBERON:0001434,4.03e-08,100;UBERON:0001009,4.69e-08,112;UBERON:0004535,6.62e-08,109;UBERON:0002390,1.30e-07,98;UBERON:0003061,1.30e-07,98;UBERON:0002049,1.69e-07,78;UBERON:0007798,1.69e-07,78;UBERON:0004765,2.16e-07,90;UBERON:0002405,2.41e-07,93;UBERON:0005256,3.42e-07,122;UBERON:0002384,3.84e-07,371 | |||
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| |||
|short_description=p9@MYADM | |||
}} |
Revision as of 00:58, 21 January 2014
Short description: | p9@MYADM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MYADM_5end |
Coexpression cluster: | C482_CD14_Mast_Fibroblast_Smooth_Neutrophils_Basophils_Mesenchymal |
Association with transcript: | -5bp_to_AK027693_5end |
EntrezGene: | MYADM |
HGNC: | 7544 |
UniProt: | Q96S97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.69e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.69e-18 | 42 |
defensive cell | 1.20e-14 | 48 |
phagocyte | 1.20e-14 | 48 |
myeloid leukocyte | 1.11e-13 | 72 |
granulocyte monocyte progenitor cell | 1.94e-12 | 67 |
multi fate stem cell | 3.99e-12 | 427 |
somatic stem cell | 2.12e-11 | 433 |
myeloid lineage restricted progenitor cell | 2.33e-11 | 66 |
stem cell | 1.27e-10 | 441 |
macrophage dendritic cell progenitor | 1.74e-10 | 61 |
monopoietic cell | 7.00e-10 | 59 |
monocyte | 7.00e-10 | 59 |
monoblast | 7.00e-10 | 59 |
promonocyte | 7.00e-10 | 59 |
vascular associated smooth muscle cell | 3.09e-08 | 32 |
mesenchymal cell | 5.09e-08 | 354 |
connective tissue cell | 1.45e-07 | 361 |
smooth muscle cell | 3.94e-07 | 43 |
smooth muscle myoblast | 3.94e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.00e-23 | 315 |
mesoderm-derived structure | 2.00e-23 | 315 |
presumptive mesoderm | 2.00e-23 | 315 |
lateral plate mesoderm | 4.36e-21 | 203 |
musculoskeletal system | 2.49e-13 | 167 |
artery | 5.95e-12 | 42 |
arterial blood vessel | 5.95e-12 | 42 |
arterial system | 5.95e-12 | 42 |
epithelial tube | 1.86e-11 | 117 |
epithelial tube open at both ends | 2.22e-11 | 59 |
blood vessel | 2.22e-11 | 59 |
blood vasculature | 2.22e-11 | 59 |
vascular cord | 2.22e-11 | 59 |
bone marrow | 6.47e-11 | 76 |
splanchnic layer of lateral plate mesoderm | 4.05e-10 | 83 |
bone element | 1.82e-09 | 82 |
vessel | 2.44e-09 | 68 |
systemic artery | 3.03e-09 | 33 |
systemic arterial system | 3.03e-09 | 33 |
epithelial vesicle | 3.59e-08 | 78 |
skeletal system | 4.03e-08 | 100 |
circulatory system | 4.69e-08 | 112 |
cardiovascular system | 6.62e-08 | 109 |
hematopoietic system | 1.30e-07 | 98 |
blood island | 1.30e-07 | 98 |
vasculature | 1.69e-07 | 78 |
vascular system | 1.69e-07 | 78 |
skeletal element | 2.16e-07 | 90 |
immune system | 2.41e-07 | 93 |
trunk mesenchyme | 3.42e-07 | 122 |
connective tissue | 3.84e-07 | 371 |