FFCP PHASE1:Hg19::chr2:70166499..70166536,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4084 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6761 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=235bp_to_BC051693_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_6_at_MXD1_5end | |||
|id=chr2:70166499..70166536,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.09e-27!76;CL:0002009!7.16e-25!65;CL:0002194!6.12e-24!63;CL:0000576!6.12e-24!63;CL:0000040!6.12e-24!63;CL:0000559!6.12e-24!63;CL:0000839!7.51e-24!70;CL:0000860!1.11e-23!45;CL:0000557!3.04e-23!71;CL:0002057!8.56e-23!42;CL:0000763!1.63e-18!112;CL:0000049!1.63e-18!112;CL:0000738!1.93e-17!140;CL:0002087!8.97e-15!119;CL:0002031!1.35e-14!124;CL:0000037!1.08e-13!172;CL:0000566!1.08e-13!172;CL:0002032!5.73e-13!165;CL:0000837!5.73e-13!165;CL:0000988!9.41e-12!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.22e-57;33!CL:0002057;6.22e-57;33!CL:0000473;3.16e-48;39!CL:0000234;3.16e-48;39!CL:0000576;2.53e-31;48!CL:0000766;1.55e-27;69!CL:0000094;2.66e-27;8!CL:0000081;1.36e-19;11!CL:0000763;7.57e-17;100!CL:0000775;5.47e-15;3!CL:0000771;1.40e-10;2!CL:0000738;7.53e-10;136!CL:0002087;5.74e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.54e-59,72;CL:0000473,1.50e-56,48;CL:0000234,1.50e-56,48;CL:0000860,2.31e-55,42;CL:0002057,2.31e-55,42;CL:0002194,5.40e-44,59;CL:0000576,5.40e-44,59;CL:0000040,5.40e-44,59;CL:0000559,5.40e-44,59;CL:0002009,2.25e-42,61;CL:0000839,9.56e-39,66;CL:0000557,4.38e-38,67;CL:0000763,2.11e-37,108;CL:0000049,2.11e-37,108;CL:0000738,3.60e-30,136;CL:0000094,2.33e-27,8;CL:0002032,2.47e-24,161;CL:0000837,2.47e-24,161;CL:0000037,5.21e-23,168;CL:0002087,1.69e-21,115;CL:0000988,1.85e-21,177;CL:0002031,2.39e-20,120;CL:0000081,1.24e-19,11;CL:0000775,4.88e-15,3;CL:0000771,1.40e-10,2;CL:0000134,3.95e-09,354;CL:0002320,8.46e-09,361;CL:0000219,1.23e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;8.43e-44;42!CL:0000049;1.15e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.05e-24!102;UBERON:0003061!5.05e-24!102;UBERON:0002193!2.64e-21!112;UBERON:0002371!5.06e-19!80;UBERON:0001474!2.81e-17!86;UBERON:0002405!2.14e-14!115;UBERON:0004765!1.49e-12!101;UBERON:0001434!1.49e-12!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.58e-10;15!UBERON:0000179;3.58e-10;15!UBERON:0000463;3.58e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.42e-39,98;UBERON:0003061,8.42e-39,98;UBERON:0002193,1.44e-34,108;UBERON:0002371,6.62e-33,76;UBERON:0001474,4.46e-30,82;UBERON:0004765,6.90e-27,90;UBERON:0002405,7.84e-26,93;UBERON:0001434,1.30e-23,100;UBERON:0003081,4.49e-15,203;UBERON:0002204,8.86e-12,167;UBERON:0000178,3.89e-10,15;UBERON:0000179,3.89e-10,15;UBERON:0000463,3.89e-10,15;UBERON:0002384,2.39e-08,371;UBERON:0000926,6.47e-08,315;UBERON:0004120,6.47e-08,315;UBERON:0006603,6.47e-08,315 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0,1.39334510984468,0,0,0,0.0774672005803016,0.142169232487422,0.587200878669695,0.553995408531877,0.601633342410425,1.73608696572681,0.447830948479849,0,0.257575567634187,2.18097358169347,0.755751887377619,0,1.62700325833979,0.822335776043652,2.47765096716083,10.0692337312753,2.56160706529101,0.945928919554341,7.92915065694223,3.87290810150296,4.06279459783025,3.76484679085209,2.18324920046277,2.02251136000576,14.6920268338033,3.85114832491312,12.1474053901818,2.96866170168044,1.99463657621632,0.426224750532694,10.7377418292576,0.56738522469114,0,4.52247597462138,4.17186334736161,1.95469960234605,4.84319602106695,1.10483290796269,1.58231193720442,0.422510572623884,0.850417199860174,0,0.673971786878971,0.901061357049038,0.16072558669708,0,0.39783335439818,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.790152254325231,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.520237390239513,0.164437904603676,0,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.534880391567015,0,0,0,0,0,0,0.289693037921647,0,0,0.189069634328136,0,0,0.196468613246569,0,0,0.324547393654683,0.348259474598534,0.26591592103773,0.715471872916026,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,9.22462922052443,15.511210565933,0,0.496971951695318,0.379891534993739,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0.277064115484183,0,0,0,0.226864366320042,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0.462942225792648,0.325808305310325,0,0,0.231860809950154,0,0.144366447761074,0,0.190254152234598,0,0,0.492434012174795,0.234004265139238,0.445893486866185,0,0,0.141775097242386,0.447792613514241,0.290633938513962,0,0,0.176096868026452,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0.871533458600294,0,0,1.50677127429638,8.43335757932127,0.239624855491583,0,0,0,0,0,0.336255431980582,0.591092280605782,0,0.513372145118994,0,0,0,0,0,44.9404214368309,47.865833472644,4.97298616123243,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0.128139149255701,0,0.64341568457443,0,0,0.177561725313127,0,0,0,0.120859449591622,0.40101294060657,0.644566922551274,0.34444334449382,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.412164046590889,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.991709492165869,0,0.127612712494584,0.708104465988849,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0.507447609232169,0.764637207142375,4.5571774973933,3.33524485640905,3.29089818468955,2.59389324477087,1.08006287447623,7.13812658664843,0.213648142254946,0,0,0.185803175125719,0.144269212976445,0.284567373393656,0.159426272728822,0,0,0.423347165447766,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,1.00299045849731,0,0.95497793895076,0.296964680832639,0,0.994147647766298,0.140669416410513,0.222617410045812,0.494411622680279,0.211125408127993,0.19924798825107,0,0.503865495708552,0,0.246169610922139,0.311039587661807,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0.241192877250816,0,0.442317039724898,0.295547618953547,0,0,0.83654246567162,0.384751292518985,0,0,0.359030577639089,0.325942115766024,1.27600463892768,0,1.06606955203727,0,0.156980256395025,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0.580537987734511,0.292357268344742,0.0821154570532092,1.74580229679155,0.176512253383001,0.225980740780532,0.137041924646751,0,0.0633107959558787,0.195551382734803,0,0,0.19980960958213,0.144090417154106,0,0,2.3048767678104,0.124252535565433,0.471388069233591,0,0.104602846312333,0.203996435272644,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0.599037001496973,0.429226048136571,0,0,0.360299883542404,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0.0846733320657845,0,0.272406812223151,0,0,0,0.2249738915515,0.7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| |||
|short_description=p6@MXD1 | |||
}} |
Revision as of 03:44, 21 January 2014
Short description: | p6@MXD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MXD1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 235bp_to_BC051693_5end |
EntrezGene: | MXD1 |
HGNC: | 6761 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.54e-59 | 72 |
defensive cell | 1.50e-56 | 48 |
phagocyte | 1.50e-56 | 48 |
classical monocyte | 2.31e-55 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.31e-55 | 42 |
monopoietic cell | 5.40e-44 | 59 |
monocyte | 5.40e-44 | 59 |
monoblast | 5.40e-44 | 59 |
promonocyte | 5.40e-44 | 59 |
macrophage dendritic cell progenitor | 2.25e-42 | 61 |
myeloid lineage restricted progenitor cell | 9.56e-39 | 66 |
granulocyte monocyte progenitor cell | 4.38e-38 | 67 |
myeloid cell | 2.11e-37 | 108 |
common myeloid progenitor | 2.11e-37 | 108 |
leukocyte | 3.60e-30 | 136 |
granulocyte | 2.33e-27 | 8 |
hematopoietic oligopotent progenitor cell | 2.47e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.47e-24 | 161 |
hematopoietic stem cell | 5.21e-23 | 168 |
nongranular leukocyte | 1.69e-21 | 115 |
hematopoietic cell | 1.85e-21 | 177 |
hematopoietic lineage restricted progenitor cell | 2.39e-20 | 120 |
blood cell | 1.24e-19 | 11 |
neutrophil | 4.88e-15 | 3 |
eosinophil | 1.40e-10 | 2 |
mesenchymal cell | 3.95e-09 | 354 |
connective tissue cell | 8.46e-09 | 361 |
motile cell | 1.23e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.42e-39 | 98 |
blood island | 8.42e-39 | 98 |
hemolymphoid system | 1.44e-34 | 108 |
bone marrow | 6.62e-33 | 76 |
bone element | 4.46e-30 | 82 |
skeletal element | 6.90e-27 | 90 |
immune system | 7.84e-26 | 93 |
skeletal system | 1.30e-23 | 100 |
lateral plate mesoderm | 4.49e-15 | 203 |
musculoskeletal system | 8.86e-12 | 167 |
blood | 3.89e-10 | 15 |
haemolymphatic fluid | 3.89e-10 | 15 |
organism substance | 3.89e-10 | 15 |
connective tissue | 2.39e-08 | 371 |
mesoderm | 6.47e-08 | 315 |
mesoderm-derived structure | 6.47e-08 | 315 |
presumptive mesoderm | 6.47e-08 | 315 |