FFCP PHASE1:Hg19::chr2:74128496..74128516,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=72 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=145 | |||
|TSSclassifier=strong | |||
|UniProt=P63267 | |||
|association_with_transcript=57bp_to_CR536515,CR541794_5end | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_5_at_ACTG2_5end | |||
|id=chr2:74128496..74128516,+ | |||
|ontology_enrichment_celltype=CL:0002622!6.11e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.27e-19;2!UBERON:0005754;6.73e-11;1!UBERON:0009143;1.65e-10;1!UBERON:0004874;1.65e-10;1!UBERON:0001045;3.15e-10;1!UBERON:0006242;3.15e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!3.83e-10!22;UBERON:0000079!3.83e-10!22;UBERON:0005156!1.66e-09!59;UBERON:0000990!1.66e-09!59;UBERON:0006947!3.56e-08!3;UBERON:0004054!3.56e-08!3;UBERON:0003937!4.27e-08!12;UBERON:0005399!4.27e-08!12;UBERON:0001046!6.14e-08!19;UBERON:0000162!9.31e-07!14;UBERON:0001353!9.31e-07!14;UBERON:0000163!9.31e-07!14;UBERON:0006866!9.31e-07!14;UBERON:0000164!9.31e-07!14;UBERON:0000931!9.31e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.12e-28;3!UBERON:0004054;3.12e-28;3!UBERON:0005409;2.25e-24;22!UBERON:0000160;4.98e-24;17!UBERON:0005904;2.40e-21;4!UBERON:0000059;1.28e-20;11!UBERON:0004921;4.43e-19;33!UBERON:0001155;1.89e-16;9!UBERON:0003135;1.27e-13;11!UBERON:0000998;6.73e-11;1!UBERON:0006868;6.73e-11;1!UBERON:0001000;1.19e-10;1!UBERON:0005352;1.19e-10;1!UBERON:0000989;1.65e-10;1!UBERON:0008811;1.65e-10;1!UBERON:0003101;2.85e-10;22!UBERON:0000079;2.85e-10;22!UBERON:0001154;3.15e-10;1!UBERON:0001301;3.15e-10;1!UBERON:0001153;3.15e-10;1!UBERON:0009854;3.15e-10;1!UBERON:0000058;7.14e-09;10!UBERON:0001555;1.42e-08;54!UBERON:0002108;3.33e-08;4!UBERON:0004907;3.78e-08;5!UBERON:0004175;3.67e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.94e-28,3;UBERON:0004054,3.94e-28,3;UBERON:0000160,4.73e-24,17;UBERON:0005409,1.80e-21,25;UBERON:0005904,2.86e-21,4;UBERON:0000059,1.09e-20,11;UBERON:0001155,1.64e-16,9;UBERON:0003135,1.31e-13,11;UBERON:0007023,2.63e-13,114;UBERON:0000998,6.73e-11,1;UBERON:0006868,6.73e-11,1;UBERON:0001000,1.19e-10,1;UBERON:0005352,1.19e-10,1;UBERON:0000989,1.43e-10,1;UBERON:0008811,1.43e-10,1;UBERON:0006258,1.43e-10,1;UBERON:0005876,1.43e-10,1;UBERON:0004874,1.43e-10,1;UBERON:0001154,2.50e-10,1;UBERON:0001153,2.50e-10,1;UBERON:0001045,2.50e-10,1;UBERON:0003101,2.71e-10,22;UBERON:0000079,2.71e-10,22;UBERON:0001301,3.96e-10,1;UBERON:0004907,3.40e-08,5;UBERON:0002108,3.65e-08,4;UBERON:0003064,4.51e-08,28;UBERON:0004876,4.62e-08,11;UBERON:0001046,6.67e-08,19;UBERON:0004921,1.50e-07,118;UBERON:0001007,4.78e-07,145;UBERON:0001555,4.78e-07,145;UBERON:0007026,4.78e-07,145 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0.415941723061614,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0.459257792658427,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0,0,0.608731130888112,0.92947049429925,1.12678241012897,0,0.196498082026242,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,1.38141957765574,0,0,0,0,0,0,0,5.03081368748361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00035336054936,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,1.14994833854341,7.33236173920351,0,0,0,0,0,0,0,0.19566461893209,0,3.55125962564451,2.41981432097328,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,1.04836000945218,0,0,0,0,2.42472541221049,0,0.225980740780532,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0.545545977607678,0,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0.548257766857182,2.97726707033577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49136876415977,0,0,2.73947616152849,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,8.46774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,1.09279780251979,0,7.84474629612498,0,0,0,0,0,0,0,0,0,0,0,4.3820183294791,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0.244482888365733,0.813792356631477,0,0,0 | |||
|short_description=p5@ACTG2 | |||
}} |
Revision as of 03:56, 21 January 2014
Short description: | p5@ACTG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACTG2_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 57bp_to_CR536515, CR541794_5end |
EntrezGene: | ACTG2 |
HGNC: | 145 |
UniProt: | P63267 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.94e-28 | 3 |
internal male genitalia | 3.94e-28 | 3 |
intestine | 4.73e-24 | 17 |
gastrointestinal system | 1.80e-21 | 25 |
duct of male reproductive system | 2.86e-21 | 4 |
large intestine | 1.09e-20 | 11 |
colon | 1.64e-16 | 9 |
male reproductive organ | 1.31e-13 | 11 |
adult organism | 2.63e-13 | 114 |
seminal vesicle | 6.73e-11 | 1 |
seminal fluid secreting gland | 6.73e-11 | 1 |
vas deferens | 1.19e-10 | 1 |
spermatic cord | 1.19e-10 | 1 |
penis | 1.43e-10 | 1 |
intromittent organ | 1.43e-10 | 1 |
lateral plate mesenchyme | 1.43e-10 | 1 |
undifferentiated genital tubercle | 1.43e-10 | 1 |
somatopleure | 1.43e-10 | 1 |
vermiform appendix | 2.50e-10 | 1 |
caecum | 2.50e-10 | 1 |
midgut | 2.50e-10 | 1 |
male organism | 2.71e-10 | 22 |
male reproductive system | 2.71e-10 | 22 |
epididymis | 3.96e-10 | 1 |
lower digestive tract | 3.40e-08 | 5 |
small intestine | 3.65e-08 | 4 |
intermediate mesoderm | 4.51e-08 | 28 |
urogenital ridge | 4.62e-08 | 11 |
hindgut | 6.67e-08 | 19 |
subdivision of digestive tract | 1.50e-07 | 118 |
digestive system | 4.78e-07 | 145 |
digestive tract | 4.78e-07 | 145 |
primitive gut | 4.78e-07 | 145 |