FFCP PHASE1:Hg19::chr20:36758065..36758096,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7052 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11778 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=324bp_to_M98479_5end | |||
|description=CAGE_peak_4_at_TGM2_5end | |||
|id=chr20:36758065..36758096,- | |||
|ontology_enrichment_celltype=CL:0002139!4.40e-09!24;CL:0000359!2.88e-08!32;CL:0000192!5.82e-08!42;CL:0000514!5.82e-08!42;CL:0000222!6.54e-08!119;CL:0000071!4.88e-07!18;CL:0002546!4.88e-07!18;CL:0000115!6.25e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.29e-14;19!CL:0002139;1.17e-08;24!CL:0002577;7.48e-08;3!CL:0000115;1.32e-07;36!CL:0002541;1.44e-07;3!CL:0000359;2.49e-07;32!CL:0002595;5.29e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.86e-14,19;CL:0002139,1.12e-08,24;CL:0000115,4.90e-08,36;CL:0002577,7.57e-08,3;CL:0002541,1.27e-07,3;CL:0000222,1.44e-07,121;CL:0000359,1.82e-07,32;CL:0002595,5.22e-07,5;CL:0002078,8.39e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!4.69e-20!118;UBERON:0002049!4.03e-18!79;UBERON:0007798!4.03e-18!79;UBERON:0004872!3.97e-17!84;UBERON:0000055!1.08e-16!69;UBERON:0001009!2.16e-15!113;UBERON:0000477!1.16e-14!286;UBERON:0004111!2.12e-14!241;UBERON:0004535!2.15e-14!110;UBERON:0001981!2.78e-14!60;UBERON:0007500!2.78e-14!60;UBERON:0004537!2.78e-14!60;UBERON:0006965!2.78e-14!60;UBERON:0000490!5.99e-13!138;UBERON:0000119!1.02e-12!312;UBERON:0000483!3.43e-12!309;UBERON:0005256!9.15e-12!143;UBERON:0005631!1.29e-11!14;UBERON:0000158!1.29e-11!14;UBERON:0000468!3.62e-11!659;UBERON:0000467!7.79e-11!625;UBERON:0002100!7.83e-11!216;UBERON:0000480!1.06e-10!626;UBERON:0000025!1.57e-10!194;UBERON:0001637!3.35e-09!42;UBERON:0003509!3.35e-09!42;UBERON:0004572!3.35e-09!42;UBERON:0000481!4.90e-09!347;UBERON:0000923!1.07e-07!604;UBERON:0005291!1.07e-07!604;UBERON:0006598!1.07e-07!604;UBERON:0002532!1.07e-07!604;UBERON:0003124!1.32e-07!7;UBERON:0002050!1.39e-07!605;UBERON:0005423!1.39e-07!605;UBERON:0004923!1.52e-07!57;UBERON:0000478!2.63e-07!24;UBERON:0004573!4.36e-07!33;UBERON:0004571!4.36e-07!33;UBERON:0001986!4.88e-07!18;UBERON:0004638!4.88e-07!18;UBERON:0004852!4.88e-07!18;UBERON:0000926!6.70e-07!448;UBERON:0004120!6.70e-07!448;UBERON:0006603!6.70e-07!448;UBERON:0000922!8.20e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.52e-12;24!UBERON:0005631;1.97e-10;10!UBERON:0000158;1.97e-10;10!UBERON:0001987;1.07e-09;4!UBERON:0004573;5.42e-09;33!UBERON:0004571;5.42e-09;33!UBERON:0000055;2.39e-08;65!UBERON:0002049;3.26e-08;75!UBERON:0007798;3.26e-08;75!UBERON:0000077;3.41e-08;27!UBERON:0001637;5.98e-08;42!UBERON:0003509;5.98e-08;42!UBERON:0004572;5.98e-08;42!UBERON:0003124;1.44e-07;3!UBERON:0000920;1.44e-07;3!UBERON:0007500;1.47e-07;56!UBERON:0001981;1.47e-07;56!UBERON:0004537;1.47e-07;56!UBERON:0003914;1.72e-07;74!UBERON:0003513;1.92e-07;7!UBERON:0003834;5.29e-07;5!UBERON:0001533;5.29e-07;5!UBERON:0003937;8.34e-07;12!UBERON:0005399;8.34e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,9.62e-19,117;UBERON:0005631,7.77e-18,14;UBERON:0000158,7.77e-18,14;UBERON:0004872,7.84e-17,83;UBERON:0003124,1.22e-15,7;UBERON:0002049,3.43e-15,78;UBERON:0007798,3.43e-15,78;UBERON:0000055,1.38e-14,68;UBERON:0004535,6.51e-13,109;UBERON:0000478,1.34e-12,24;UBERON:0007500,1.37e-12,59;UBERON:0001981,1.37e-12,59;UBERON:0004537,1.37e-12,59;UBERON:0006965,1.37e-12,59;UBERON:0001009,2.60e-12,112;UBERON:0002100,6.47e-12,199;UBERON:0001637,7.23e-12,42;UBERON:0003509,7.23e-12,42;UBERON:0004572,7.23e-12,42;UBERON:0004111,1.95e-11,240;UBERON:0005256,2.42e-11,122;UBERON:0000490,5.16e-11,148;UBERON:0003104,2.36e-10,160;UBERON:0009142,2.36e-10,160;UBERON:0004573,6.14e-10,33;UBERON:0004571,6.14e-10,33;UBERON:0006554,8.33e-10,47;UBERON:0001987,1.07e-09,4;UBERON:0004340,1.07e-09,4;UBERON:0001008,1.68e-09,48;UBERON:0000025,7.23e-09,192;UBERON:0000483,1.32e-08,306;UBERON:0000926,1.97e-08,315;UBERON:0004120,1.97e-08,315;UBERON:0006603,1.97e-08,315;UBERON:0000119,2.22e-08,309;UBERON:0003064,6.27e-08,28;UBERON:0003081,7.63e-08,203;UBERON:0000920,1.27e-07,3;UBERON:0000077,1.73e-07,29;UBERON:0003513,1.84e-07,7;UBERON:0009569,2.05e-07,112;UBERON:0003834,5.22e-07,5;UBERON:0001533,5.22e-07,5;UBERON:0003937,9.26e-07,12;UBERON:0005399,9.26e-07,12 | |||
|phase1_expression=1.99846217197612,1.07050261945492,0.563817616383885,2.00146596706261,0,0,22.796989035148,0,0,0,0,4.15038607047327,4.48403862988371,0.123766352960047,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0.408001382488506,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.289693037921647,0.795285947051099,0.973269740605272,0.945348171640679,1.77383517970051,1.66886092816939,0.327447688744282,0,0,0.324547393654683,0.174129737299267,0.664789802594326,0,0,0,0,0,0.347140501607594,0,1.25849830862972,3.02629846134074,0.835979866147242,1.03366703667732,0,0.66944122552934,2.41697590265488,0.760272105718513,0.976248230192678,1.47065232138347,1.62028389576352,1.25019619597712,0.898117490504679,0.450445921933289,1.53316637465883,3.79706263827252,0.549605231791222,0,0,0,0,2.02608818663328,0.264818361626438,0,2.12801029319014,1.12135520028461,1.06748995729705,2.96001058100592,0,0,0,0,0,0,0.624320153660641,0,0.448346041655403,0,0,0,0.408308342509787,0,0.309977343527296,0,0.741800787835671,0.910161361938026,0.718618141816238,0,0,0,0,0.30648779579902,0.901428353439581,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.276149695926898,0.323292113637624,0,0.10075209822764,0,0,0.818238361772504,0.286804595389004,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,0.928735856063958,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0.38474715694639,3.69077727312324,0,0.4115740113314,0,6.33775174109154,8.84544495009863,0.590789906681404,0,0.122988438543114,1.88724591328378,0.768251997860379,0,0,0,0,0,4.3299402607582,0.115930404975077,0.117408694235822,1.73239737313289,1.38895653772983,2.28304982681518,0,0,0.246217006087397,0,0.743155811443641,0,0.503946384596579,1.13420077793909,0,0,1.15014803749563,0,0,0,0.144119953416961,0,0,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0.87192013766656,0.1466765716419,1.29271715757778,0,0,10.3715865468099,8.32059495290929,0,0,0,2.14466990487221,1.62786481617433,0,0,1.42156779497018,0.791951872933429,0,0.871533458600294,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,1.00034104211935,0,0.415941723061614,0.535286966391485,0,0.468565659970853,0.300946099727719,9.09630016223939,0,0,0.184369168541703,0.434418072340414,0,0,0,0,0,17.2782715724368,33.2870879020994,7.86214762657169,1.24053903909388,0.153461973288062,0,0.384417447767103,0.511707249066704,0.321707842287215,0,0.154209693802656,0.887808626565635,0.164254312027618,0,0,0.966875596732978,3.40860999515584,0,1.14814448164607,0.364182336013434,3.01586154406675,2.25599806453706,0.231046011313244,0.784349769176855,1.46139224653261,0.211103257785751,1.13733384070897,1.02056223165909,0.431831832204279,0,0.270946437543853,1.00337954770971,0,4.15538004464362,0,0,0,0,0.656029291399411,0.976135183992909,5.46117361732928,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0,0,0.991709492165869,0.192190067365106,0,0.30347334256665,4.18360994367557,1.88887408098384,1.3940745403212,0,0.532306030317022,1.73986598415015,5.00375391580584,0.429374660225974,0,0.632758849437452,0.190630193923825,0.511795582622668,0,0,0,0.719489830333259,0,0.589062011728432,1.2130948894399,3.17020642346017,0,0,1.46228093778771,2.11300293513511,1.63799893689583,1.55545975149084,0,0.551365343546124,5.97095077717098,8.33056681982149,0,0,1.21746226177622,0.30982349809975,0.845086807596724,0.860468113224309,0.785992328104969,1.426684205925,0,0,0,0.379473173765715,0,0,0,0,4.5189024372854,0.86101074534246,0,0.443430153536676,0,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,1.4098700508785,0,0.879049075631364,0,0,0.568272293612826,0.71623345421307,0.296964680832639,0.614321404198464,0,0.140669416410513,2.78271762557265,0,0,0.19924798825107,0,0,0,0,0.311039587661807,1.88723537409386,0,0,1.7755813014648,0,0,0,0.649376687132959,0,0,0,2.17499872630438,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,3.30886111566327,0.341826167541004,0,0,0,3.82801391678303,8.70177137317692,8.52855641629816,0,0,0,0,0,0,0,0.158936578980379,0.421996129056054,0.652931232636591,0,0,0,0.973033209536731,2.4441205797345,0,0,0,0,0,0,0,0,1.21390189767046,0,0,0,0.821425535170343,0,0,0.664653872707185,0,0,0,0.284609546029793,0.138674673013139,0,0,0,1.04836000945218,0.171986032471617,0,0,0.0821154570532092,0.775912131907355,0,0,0.274083849293502,0,0,0,0.400794101257669,3.62870091056899,0,0,0,0,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.687481272035051,0,0.399358000997982,0.858452096273142,0.669514372325618,0.335917362433631,0.720599767084807,0,0,0,0.0674035438541849,0,0,0,0,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| |||
|short_description=p4@TGM2 | |||
}} |
Revision as of 11:10, 21 January 2014
Short description: | p4@TGM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TGM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 324bp_to_M98479_5end |
EntrezGene: | TGM2 |
HGNC: | 11778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.86e-14 | 19 |
endothelial cell of vascular tree | 1.12e-08 | 24 |
endothelial cell | 4.90e-08 | 36 |
placental epithelial cell | 7.57e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.27e-07 | 3 |
mesodermal cell | 1.44e-07 | 121 |
vascular associated smooth muscle cell | 1.82e-07 | 32 |
smooth muscle cell of the subclavian artery | 5.22e-07 | 5 |
meso-epithelial cell | 8.39e-07 | 45 |