FFCP PHASE1:Hg19::chr20:55841618..55841629,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=655 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1074 | |||
|TSSclassifier=strong | |||
|UniProt=P18075 | |||
|association_with_transcript=54bp_to_ENST00000395863_5end | |||
|coexpression_cluster_id=C4050 | |||
|description=CAGE_peak_6_at_BMP7_5end | |||
|id=chr20:55841618..55841629,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000313;3.00e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.69e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.10e-12;3!UBERON:0004140;3.00e-09;1!UBERON:0005425;3.00e-09;1!UBERON:0007123;2.14e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.32e-18;4!DOID:1612;2.32e-18;4!DOID:299;4.91e-11;25!DOID:0050619;1.21e-09;1!DOID:1357;1.21e-09;1!DOID:3151;3.00e-09;1!DOID:2152;3.00e-09;1!DOID:3149;3.00e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.19e-18,4;DOID:1612,2.19e-18,4;DOID:299,4.66e-11,25;DOID:0050619,1.21e-09,1;DOID:1357,1.21e-09,1;DOID:2152,1.69e-09,1;DOID:3151,3.53e-09,1;DOID:3149,3.53e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.64e-27!115;UBERON:0001049!1.07e-21!57;UBERON:0005068!1.07e-21!57;UBERON:0006241!1.07e-21!57;UBERON:0007135!1.07e-21!57;UBERON:0005743!2.37e-20!86;UBERON:0000073!1.57e-19!94;UBERON:0001016!1.57e-19!94;UBERON:0001017!4.19e-19!82;UBERON:0000955!6.00e-18!69;UBERON:0006238!6.00e-18!69;UBERON:0002780!7.82e-18!41;UBERON:0001890!7.82e-18!41;UBERON:0006240!7.82e-18!41;UBERON:0002616!1.16e-17!59;UBERON:0003080!3.10e-17!42;UBERON:0002020!6.01e-17!34;UBERON:0003528!6.01e-17!34;UBERON:0001893!6.46e-17!34;UBERON:0001869!2.15e-16!32;UBERON:0002346!3.52e-16!90;UBERON:0002791!7.49e-16!33;UBERON:0003075!3.39e-15!86;UBERON:0007284!3.39e-15!86;UBERON:0000153!2.27e-14!129;UBERON:0007811!2.27e-14!129;UBERON:0002619!3.47e-13!22;UBERON:0001950!5.44e-13!20;UBERON:0003056!5.63e-13!61;UBERON:0000956!1.36e-12!25;UBERON:0000203!1.36e-12!25;UBERON:0000033!2.38e-12!123;UBERON:0000924!3.33e-11!173;UBERON:0006601!3.33e-11!173;UBERON:0004121!2.04e-10!169;UBERON:0000200!8.12e-09!6;UBERON:0001871!1.02e-08!7;UBERON:0000468!3.16e-07!659;UBERON:0002298!5.51e-07!8;UBERON:0000062!6.33e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.21e-09;1!UBERON:0001825;1.21e-09;1!UBERON:0005795;3.00e-09;1!UBERON:0000941;3.00e-09;1!UBERON:0001301;3.00e-09;1!UBERON:0004911;3.00e-09;1!UBERON:0001785;3.00e-09;1!UBERON:0002464;3.00e-09;1!UBERON:0004904;3.00e-09;1!UBERON:0001021;3.00e-09;1!UBERON:0000310;1.15e-07;10!UBERON:0002046;2.14e-07;5!UBERON:0002050;2.14e-07;5!UBERON:0005423;2.14e-07;5!UBERON:0001443;5.22e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.21e-09,1;UBERON:0001825,1.21e-09,1;UBERON:0004911,1.69e-09,1;UBERON:0000941,2.77e-09,1;UBERON:0001785,2.77e-09,1;UBERON:0002464,2.77e-09,1;UBERON:0004904,2.77e-09,1;UBERON:0001021,2.77e-09,1;UBERON:0003902,2.77e-09,1;UBERON:0005425,2.77e-09,1;UBERON:0001301,3.00e-09,1;UBERON:0000310,1.13e-07,10;UBERON:0002046,2.76e-07,5;UBERON:0004117,2.76e-07,5;UBERON:0007689,2.76e-07,5;UBERON:0007123,2.76e-07,5;UBERON:0003091,2.76e-07,5;UBERON:0001443,5.12e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,2.09161441566814,0.853015394924529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.530119073285941,0.232387885739037,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0.769350375349168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,1.38871292465715,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.74214478529481,0,1.04171104434093,0,0,0.568967241427498,0,0.236387681767936,0,0,0,0,0.361789315876224,0,0,0,0.438770794307945,0,0.697118721393016,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24059214301822,0,0,0,0,0.296521128680622,0.988511511572023,1.56632924258183,0.943615861729479,0,0.702793337176017,0.547364367646998,0.19566461893209,0.242780379534093,0.394584402849391,0,0.30607276163049,0,0.150323419414493,0.518440956986236,0,0,0,0,0,0,0,0.195984794828755,0,1.39781334593624,0,0,0,0,0,0,0.90392296312213,0,0,0.379864775735272,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0.687219576995494,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,1.74677028465488,0,0,0,0.0824158583811665,0,0,0,0,0.272406812223151,0,0.137539436597234,0.415440338029185,0,0,0.425246896606173,1.34173875039706,0,0.944182586429966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66991963625398,0.886068179966986,0.244052529803926,0.625954653532499,0.573409195690071,0.443716206147409,1.24192805882767,0.276697269872462,0,0,0,0,0.468334905806882,2.8984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0,0,0.963438376446893,0,0,0.205116364240755,0,0.553258019713743,0.484426936895553,1.42769420259154,0.785181748008205,0,0.366857197043358,0,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0.472763092328763,0,0.413373593002368,0.507326481551255,0,0,0.496211178389294,2.98981115411355,0.127762427639595,0,0,0,0,0.887023701626388,0,0,0.271878931907327,0.394636641377094,0,0,0.078493092850514,0.471346769748006,0.280272163313789,0,0,0,5.00335809236594,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0.9164274741762,0,0,1.78968690876468,0,0,0,0,0,0.485710993059139,1.87151570769685,0.397901550322736,0,0.45178432815584,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.785233868459781,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,3.31320280605688,0.407948941145488,0.436350690340377,0,0,0,0,0,0,0,0.203977659483963,0,0,0.250707539292375,0.151557396436479,0,1.65833887891756,0.620597975171371,0.639701945702943,0.714193294391221,0.129177819672012,0.124149428591716,0,1.0820016907288,2.02117188958219,0.217716747896961,0.342233301085281,0.202056159043763,0.0717222053926763,0,0,0,0,1.16772762738563,0,0.122241444182866,1.22068853494722,0,0,0 | |||
|short_description=p6@BMP7 | |||
}} |
Revision as of 12:22, 21 January 2014
Short description: | p6@BMP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BMP7_5end |
Coexpression cluster: | C4050_MCF7_Burkitt_keratoacanthoma_colon_small_synovial_peripheral |
Association with transcript: | 54bp_to_ENST00000395863_5end |
EntrezGene: | BMP7 |
HGNC: | 1074 |
UniProt: | P18075 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.69e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.21e-09 | 1 |
paranasal sinus | 1.21e-09 | 1 |
epithelium of female gonad | 1.69e-09 | 1 |
cranial nerve II | 2.77e-09 | 1 |
cranial nerve | 2.77e-09 | 1 |
nerve trunk | 2.77e-09 | 1 |
nerve connecting eye with brain | 2.77e-09 | 1 |
nerve | 2.77e-09 | 1 |
retinal neural layer | 2.77e-09 | 1 |
presumptive neural retina | 2.77e-09 | 1 |
epididymis | 3.00e-09 | 1 |
breast | 1.13e-07 | 10 |
thyroid gland | 2.76e-07 | 5 |
pharyngeal pouch | 2.76e-07 | 5 |
thyroid diverticulum | 2.76e-07 | 5 |
pharyngeal pouch 2 | 2.76e-07 | 5 |
thyroid primordium | 2.76e-07 | 5 |
chest | 5.12e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.19e-18 | 4 |
breast cancer | 2.19e-18 | 4 |
adenocarcinoma | 4.66e-11 | 25 |
paranasal sinus cancer | 1.21e-09 | 1 |
maxillary sinus cancer | 1.21e-09 | 1 |
ovary epithelial cancer | 1.69e-09 | 1 |
skin squamous cell carcinoma | 3.53e-09 | 1 |
keratoacanthoma | 3.53e-09 | 1 |