FFCP PHASE1:Hg19::chr22:30722866..30722911,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83874 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23609 | |||
|TSSclassifier=strong | |||
|UniProt=B3KXT8 | |||
|association_with_transcript=0bp_to_ENST00000403477,ENST00000490449,uc003ahk.3,uc010gvu.2,uc011akt.1_5end | |||
|description=CAGE_peak_1_at_TBC1D10A_5end | |||
|id=chr22:30722866..30722911,- | |||
|ontology_enrichment_celltype=CL:0000738!2.70e-16!140;CL:0002031!6.86e-11!124;CL:0002087!4.13e-10!119;CL:0000791!1.17e-09!18;CL:0000789!1.17e-09!18;CL:0002420!1.17e-09!18;CL:0002419!1.17e-09!18;CL:0000790!1.17e-09!18;CL:0000766!7.96e-09!76;CL:0000557!1.07e-08!71;CL:0000084!3.04e-08!25;CL:0000827!3.04e-08!25;CL:0002057!3.53e-08!42;CL:0000625!1.12e-07!11;CL:0000839!8.38e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.62e-09;18!CL:0000789;1.62e-09;18!CL:0002419;1.62e-09;18!CL:0000084;4.04e-08;25!CL:0000625;1.21e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.20e-18,136;CL:0002031,2.57e-12,120;CL:0002087,1.72e-11,115;CL:0000766,1.71e-10,72;CL:0000557,2.01e-10,67;CL:0000791,1.16e-09,18;CL:0000789,1.16e-09,18;CL:0002420,1.16e-09,18;CL:0002419,1.16e-09,18;CL:0000790,1.16e-09,18;CL:0000839,2.82e-08,66;CL:0000084,3.03e-08,25;CL:0000827,3.03e-08,25;CL:0000860,3.52e-08,42;CL:0002057,3.52e-08,42;CL:0002009,4.11e-08,61;CL:0000625,1.12e-07,11;CL:0000473,1.29e-07,48;CL:0000234,1.29e-07,48;CL:0002194,1.74e-07,59;CL:0000576,1.74e-07,59;CL:0000040,1.74e-07,59;CL:0000559,1.74e-07,59;CL:0000037,6.61e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;1.62e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.08e-10!216;UBERON:0002390!1.01e-08!102;UBERON:0003061!1.01e-08!102;UBERON:0005631!6.97e-08!14;UBERON:0000158!6.97e-08!14;UBERON:0002193!8.96e-08!112;UBERON:0002371!5.34e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.30e-11,203;UBERON:0002390,4.69e-10,98;UBERON:0003061,4.69e-10,98;UBERON:0002193,6.15e-09,108;UBERON:0002371,2.39e-08,76;UBERON:0002405,6.02e-08,93;UBERON:0005631,6.95e-08,14;UBERON:0000158,6.95e-08,14;UBERON:0001474,1.53e-07,82;UBERON:0004765,6.87e-07,90 | |||
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| |||
|short_description=p1@TBC1D10A | |||
}} |
Revision as of 15:16, 21 January 2014
Short description: | p1@TBC1D10A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TBC1D10A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000403477, ENST00000490449, uc003ahk.3, uc010gvu.2, uc011akt.1_5end |
EntrezGene: | TBC1D10A |
HGNC: | 23609 |
UniProt: | B3KXT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.20e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 2.57e-12 | 120 |
nongranular leukocyte | 1.72e-11 | 115 |
myeloid leukocyte | 1.71e-10 | 72 |
granulocyte monocyte progenitor cell | 2.01e-10 | 67 |
mature alpha-beta T cell | 1.16e-09 | 18 |
alpha-beta T cell | 1.16e-09 | 18 |
immature T cell | 1.16e-09 | 18 |
mature T cell | 1.16e-09 | 18 |
immature alpha-beta T cell | 1.16e-09 | 18 |
myeloid lineage restricted progenitor cell | 2.82e-08 | 66 |
T cell | 3.03e-08 | 25 |
pro-T cell | 3.03e-08 | 25 |
classical monocyte | 3.52e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.52e-08 | 42 |
macrophage dendritic cell progenitor | 4.11e-08 | 61 |
CD8-positive, alpha-beta T cell | 1.12e-07 | 11 |
defensive cell | 1.29e-07 | 48 |
phagocyte | 1.29e-07 | 48 |
monopoietic cell | 1.74e-07 | 59 |
monocyte | 1.74e-07 | 59 |
monoblast | 1.74e-07 | 59 |
promonocyte | 1.74e-07 | 59 |
hematopoietic stem cell | 6.61e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.30e-11 | 203 |
hematopoietic system | 4.69e-10 | 98 |
blood island | 4.69e-10 | 98 |
hemolymphoid system | 6.15e-09 | 108 |
bone marrow | 2.39e-08 | 76 |
immune system | 6.02e-08 | 93 |
extraembryonic membrane | 6.95e-08 | 14 |
membranous layer | 6.95e-08 | 14 |
bone element | 1.53e-07 | 82 |
skeletal element | 6.87e-07 | 90 |