FFCP PHASE1:Hg19::chr3:28333332..28333352,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152100 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28783 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000495428_5end | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_2_at_CMC1_5end | |||
|id=chr3:28333332..28333352,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.31e-22!140;CL:0000791!9.23e-21!18;CL:0000789!9.23e-21!18;CL:0002420!9.23e-21!18;CL:0002419!9.23e-21!18;CL:0000790!9.23e-21!18;CL:0000625!6.56e-19!11;CL:0002087!1.24e-15!119;CL:0000084!2.33e-15!25;CL:0000827!2.33e-15!25;CL:0000037!6.01e-15!172;CL:0000566!6.01e-15!172;CL:0000988!3.25e-13!182;CL:0002032!3.60e-12!165;CL:0000837!3.60e-12!165;CL:0002031!8.82e-12!124;CL:0000838!2.56e-11!52;CL:0000542!5.71e-11!53;CL:0000051!5.71e-11!53;CL:0000094!1.48e-09!8;CL:0000766!2.41e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000625;3.94e-33;11!CL:0000791;2.11e-26;18!CL:0000789;2.11e-26;18!CL:0002419;2.11e-26;18!CL:0000084;8.94e-21;25!CL:0000094;1.42e-12;8!CL:0000767;4.36e-10;3!CL:0000623;5.78e-10;3!CL:0000226;3.18e-09;3!CL:0000842;3.18e-09;3!CL:0002087;3.58e-09;104!CL:0000784;4.71e-09;3!CL:0000081;6.14e-09;11!CL:0002619;1.25e-08;3!CL:0000542;2.18e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.08e-33,11;CL:0000738,6.55e-29,136;CL:0000791,1.87e-26,18;CL:0000789,1.87e-26,18;CL:0002420,1.87e-26,18;CL:0002419,1.87e-26,18;CL:0000790,1.87e-26,18;CL:0000037,2.90e-21,168;CL:0000084,7.61e-21,25;CL:0000827,7.61e-21,25;CL:0002087,1.00e-20,115;CL:0000988,1.29e-19,177;CL:0002032,1.84e-16,161;CL:0000837,1.84e-16,161;CL:0002031,1.62e-15,120;CL:0000838,2.84e-14,52;CL:0000542,6.50e-14,53;CL:0000051,6.50e-14,53;CL:0000094,1.39e-12,8;CL:0000767,4.30e-10,3;CL:0000623,5.62e-10,3;CL:0000825,5.62e-10,3;CL:0000766,1.19e-09,72;CL:0000226,3.09e-09,3;CL:0000842,3.09e-09,3;CL:0000784,4.85e-09,3;CL:0000081,6.06e-09,11;CL:0002619,1.67e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.11e-26;18!CL:0000051;2.18e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.98e-17!115;UBERON:0000178!2.53e-14!15;UBERON:0000179!2.53e-14!15;UBERON:0000463!2.53e-14!15;UBERON:0002390!2.77e-11!102;UBERON:0003061!2.77e-11!102;UBERON:0002193!6.24e-11!112;UBERON:0004177!1.76e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.22e-26;15!UBERON:0000179;9.22e-26;15!UBERON:0000463;9.22e-26;15!UBERON:0002390;5.34e-14;32!UBERON:0002193;4.44e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.36e-26,15;UBERON:0000179,8.36e-26,15;UBERON:0000463,8.36e-26,15;UBERON:0002193,1.86e-17,108;UBERON:0002390,3.94e-17,98;UBERON:0003061,3.94e-17,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,22.8151280572364,57.9582391126791,16.5653251948201,0,0,0,0,0,0,7.75593571944628,1.20326668482085,4.12320654360118,1.11957737119962,7.12566065241755,1.28787783817093,1.01778767145695,0.377875943688809,0,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,1.72372840368309,1.93645405075148,0,1.12945403725563,0,0.224723484445085,1.22433556948361,0,0,0,0,0,1.16083695451434,0,0,1.25624332628372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,1.28019066769952,0,0,0,0,0.569212969109448,0,0,1.32171328579026,15.694239763483,0,0.196709770113833,0.786021525498329,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226618685395132,10.3469533272519,20.6176467289578,12.1449452169361,80.5970498239965,145.842693663838,176.784080267398,29.813873577399,39.2918896244064,53.7202124175087,77.8997159224815,165.04672738113,35.8860002940024,17.6510529217115,20.1305921397091,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0.649094787309367,0,0,3.81584998888547,6.29194401858141,4.45749001595478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68127715990291,39.9972443209912,12.937654491571,22.3316883126762,0,0,0,0,0,0.749007023947182,0,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.65041696654683,4.52999821719095,6.61710858381355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.659006605437454,0,0,0,0,22.3276948062155,22.9391162142713,6.83576624608995,12.388052323805,10.6954191002411,15.5633594686252,14.040817368191,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,1.10513566212459,0,0,0,0,0,0,0,0.986434056369336,14.3689855408164,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,2.4441205797345,0,0,0,0,0.802577647298789,0,0,0,0,0,4.83962864194656,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.446342914883745,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.315222829196793,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.879313402068495,1.32506888912221,0,0,0,0,5.65973286608782,3.45849471219265,3.72815149812476,7.44249032717926,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16916185303633,0.664324201566815,0.327130788511688,0,0,0,1.39991177098451,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0.535701835878287,0,0,0,0.443511850813194,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,1.31135736302374,0,0.245148321753905,0,0,0,0,0,13.0637645991996,5.28554681383333,0,0,0,0,0.730336388246517,0.917458566809082,0.143339583151451,0,0,0,1.5870805215462,0,0,0,0,0,0.253397002022874,0,0,0,0,0.530450887527676,0,0,0,0.426467963801962,0.23806443146374,0.258355639344024,0.372448285775147,0,0.25458863311266,0,0,0.342233301085281,1.75115337837928,0.215166616178029,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0,2.01273793591026,0 | |||
|short_description=p2@CMC1 | |||
}} |
Revision as of 17:57, 21 January 2014
Short description: | p2@CMC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CMC1_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 0bp_to_ENST00000495428_5end |
EntrezGene: | CMC1 |
HGNC: | 28783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.08e-33 | 11 |
leukocyte | 6.55e-29 | 136 |
mature alpha-beta T cell | 1.87e-26 | 18 |
alpha-beta T cell | 1.87e-26 | 18 |
immature T cell | 1.87e-26 | 18 |
mature T cell | 1.87e-26 | 18 |
immature alpha-beta T cell | 1.87e-26 | 18 |
hematopoietic stem cell | 2.90e-21 | 168 |
T cell | 7.61e-21 | 25 |
pro-T cell | 7.61e-21 | 25 |
nongranular leukocyte | 1.00e-20 | 115 |
hematopoietic cell | 1.29e-19 | 177 |
hematopoietic oligopotent progenitor cell | 1.84e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.84e-16 | 161 |
hematopoietic lineage restricted progenitor cell | 1.62e-15 | 120 |
lymphoid lineage restricted progenitor cell | 2.84e-14 | 52 |
lymphocyte | 6.50e-14 | 53 |
common lymphoid progenitor | 6.50e-14 | 53 |
granulocyte | 1.39e-12 | 8 |
basophil | 4.30e-10 | 3 |
natural killer cell | 5.62e-10 | 3 |
pro-NK cell | 5.62e-10 | 3 |
myeloid leukocyte | 1.19e-09 | 72 |
single nucleate cell | 3.09e-09 | 3 |
mononuclear cell | 3.09e-09 | 3 |
plasmacytoid dendritic cell | 4.85e-09 | 3 |
blood cell | 6.06e-09 | 11 |
adult endothelial progenitor cell | 1.67e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 8.36e-26 | 15 |
haemolymphatic fluid | 8.36e-26 | 15 |
organism substance | 8.36e-26 | 15 |
hemolymphoid system | 1.86e-17 | 108 |
hematopoietic system | 3.94e-17 | 98 |
blood island | 3.94e-17 | 98 |