FFCP PHASE1:Hg19::chr3:69812852..69812864,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4286 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WYR3,O75030 | |||
|association_with_transcript=-97bp_to_ENST00000328528,ENST00000457080,NM_006722,uc003doa.2_5end | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_17_at_MITF_5end | |||
|id=chr3:69812852..69812864,+ | |||
|ontology_enrichment_celltype=CL:1000497!3.77e-20!18;CL:0002518!3.77e-20!18;CL:1000507!3.23e-15!12;CL:1000494!3.23e-15!12;CL:1000449!1.84e-14!16;CL:0002681!2.93e-10!13;CL:0002584!2.93e-10!13 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.53e-09;3!CL:1000497;8.34e-07;17!CL:0002518;8.34e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.81e-09,3;CL:1000497,8.11e-07,17;CL:0002518,8.11e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003918;5.41e-11;10!UBERON:0007687;5.41e-11;10!UBERON:0003104;3.82e-08;31 | |||
|ontology_enrichment_disease=DOID:4468!6.47e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.21e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,9.40e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.48e-25!27;UBERON:0003918!1.48e-25!27;UBERON:0005095!1.48e-25!27;UBERON:0007687!1.48e-25!27;UBERON:0000489!4.88e-21!32;UBERON:0006554!6.95e-19!44;UBERON:0001008!2.23e-18!45;UBERON:0006555!5.40e-17!17;UBERON:0005103!5.40e-17!17;UBERON:0000083!5.40e-17!17;UBERON:0009201!5.40e-17!17;UBERON:0004819!5.40e-17!17;UBERON:0006553!5.40e-17!17;UBERON:0003074!5.40e-17!17;UBERON:0003060!5.40e-17!17;UBERON:0000080!5.90e-16!18;UBERON:0002120!5.90e-16!18;UBERON:0004875!5.90e-16!18;UBERON:0005721!5.90e-16!18;UBERON:0005754!5.90e-16!18;UBERON:0007297!5.90e-16!18;UBERON:0003103!9.93e-16!69;UBERON:0009773!3.23e-15!12;UBERON:0001231!3.23e-15!12;UBERON:0004810!3.23e-15!12;UBERON:0004211!1.84e-14!16;UBERON:0001285!1.84e-14!16;UBERON:0007684!1.84e-14!16;UBERON:0003220!1.84e-14!16;UBERON:0004208!1.84e-14!16;UBERON:0004876!3.43e-14!20;UBERON:0003887!1.95e-13!21;UBERON:0000058!4.31e-13!26;UBERON:0005172!1.51e-12!55;UBERON:0005173!1.51e-12!55;UBERON:0002417!5.66e-11!61;UBERON:0000916!5.66e-11!61;UBERON:0003064!2.91e-10!37;UBERON:0001225!2.93e-10!13;UBERON:0008987!2.93e-10!13;UBERON:0003127!1.91e-08!2;UBERON:0001851!3.29e-08!16;UBERON:0009569!6.53e-08!113;UBERON:0000353!1.09e-07!17;UBERON:0005177!1.51e-07!107;UBERON:0007023!1.89e-07!115;UBERON:0004175!9.04e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;7.62e-26;1!UBERON:0001389;7.62e-26;1!UBERON:0000026;7.62e-26;1!UBERON:0008784;7.62e-26;1!UBERON:0006058;7.62e-26;1!UBERON:0003663;7.62e-26;1!UBERON:0004256;7.62e-26;1!UBERON:0004708;7.62e-26;1!UBERON:0002101;7.62e-26;1!UBERON:0004709;7.62e-26;1!UBERON:0002529;7.62e-26;1!UBERON:0010538;7.62e-26;1!UBERON:0003661;7.62e-26;1!UBERON:0010890;7.62e-26;1!UBERON:0002471;7.62e-26;1!UBERON:0001383;7.62e-26;1!UBERON:0010758;7.62e-26;1!UBERON:0010707;7.62e-26;1!UBERON:0000978;7.62e-26;1!UBERON:0002103;7.62e-26;1!UBERON:0001665;7.62e-26;1!UBERON:0003823;7.62e-26;1!UBERON:0000154;7.62e-26;1!UBERON:0010709;7.62e-26;1!UBERON:0005090;1.21e-13;2!UBERON:0001630;1.21e-13;2!UBERON:0002113;5.07e-10;24!UBERON:0011143;5.07e-10;24!UBERON:0003124;1.53e-09;3!UBERON:0000920;1.53e-09;3!UBERON:0000489;2.10e-08;29!UBERON:0006554;3.82e-08;30!UBERON:0001008;3.82e-08;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,7.62e-26,1;UBERON:0001389,7.62e-26,1;UBERON:0000026,7.62e-26,1;UBERON:0008784,7.62e-26,1;UBERON:0006058,7.62e-26,1;UBERON:0003663,7.62e-26,1;UBERON:0004256,7.62e-26,1;UBERON:0004708,7.62e-26,1;UBERON:0002101,7.62e-26,1;UBERON:0004709,7.62e-26,1;UBERON:0002529,7.62e-26,1;UBERON:0010538,7.62e-26,1;UBERON:0003661,7.62e-26,1;UBERON:0010890,7.62e-26,1;UBERON:0002471,7.62e-26,1;UBERON:0001383,7.62e-26,1;UBERON:0004357,7.62e-26,1;UBERON:0004347,7.62e-26,1;UBERON:0005420,7.62e-26,1;UBERON:0005732,7.62e-26,1;UBERON:0010758,7.62e-26,1;UBERON:0010707,7.62e-26,1;UBERON:0000978,7.62e-26,1;UBERON:0002103,7.62e-26,1;UBERON:0001665,7.62e-26,1;UBERON:0003823,7.62e-26,1;UBERON:0000154,7.62e-26,1;UBERON:0010709,7.62e-26,1;UBERON:0005733,7.62e-26,1;UBERON:0005730,7.62e-26,1;UBERON:0006834,9.79e-26,1;UBERON:0005090,1.21e-13,2;UBERON:0001630,1.21e-13,2;UBERON:0000920,1.81e-09,3;UBERON:0002113,2.59e-09,26;UBERON:0003918,2.59e-09,26;UBERON:0011143,2.59e-09,26;UBERON:0005095,2.59e-09,26;UBERON:0007687,2.59e-09,26;UBERON:0000489,6.54e-08,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,1.56869953835371,0,0.211103257785751,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52519434720661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0.384751292518985,0,0.23056390438806,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,1.89898258075224,0.163232808159148,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313808538937,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0,0,0.630445658393585,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.96845315057814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0,0.078493092850514,0,0,0,6.69375532777726,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,0.435433495793923,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,1.1001729976458,0,0,0,0 | |||
|short_description=p17@MITF | |||
}} |
Revision as of 19:43, 21 January 2014
Short description: | p17@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_MITF_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | -97bp_to_ENST00000328528, ENST00000457080, NM_006722, uc003doa.2_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | Q8WYR3O75030 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
kidney cell | 8.11e-07 | 17 |
kidney epithelial cell | 8.11e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 9.40e-14 | 2 |