FFCP PHASE1:Hg19::chr3:100211412..100211501,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55076 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25480 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NWC5 | |||
|association_with_transcript=0bp_to_ENST00000323523,ENST00000403410,NM_018004,uc003dtz.1_5end | |||
|coexpression_cluster_id=C4255 | |||
|description=CAGE_peak_1_at_TMEM45A_5end | |||
|id=chr3:100211412..100211501,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.90e-23!180;CL:0000057!3.16e-14!75;CL:0000680!7.31e-12!57;CL:0000056!7.31e-12!57;CL:0000355!7.31e-12!57;CL:0000187!3.66e-11!54;CL:0000183!7.81e-11!59;CL:0000393!1.01e-09!60;CL:0000211!1.01e-09!60;CL:0000192!1.18e-09!42;CL:0000514!1.18e-09!42;CL:0000359!2.86e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.57e-11;19!CL:0000134;3.53e-10;55!CL:0000048;1.03e-08;58!CL:0000723;1.48e-08;61!CL:0000359;7.94e-08;32!CL:0000192;2.02e-07;43!CL:0000034;6.75e-07;69!CL:0000187;6.97e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.28e-15,76;CL:0000680,3.32e-12,58;CL:0000056,3.32e-12,58;CL:0000355,3.32e-12,58;CL:0000187,1.70e-11,55;CL:0000349,8.31e-11,19;CL:0000393,3.95e-10,61;CL:0000211,3.95e-10,61;CL:0000192,5.68e-10,43;CL:0000514,5.68e-10,43;CL:0000359,2.48e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000514;2.02e-07;43!CL:0000355;7.94e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.48e-15!83;UBERON:0002329!7.48e-15!83;UBERON:0003077!7.48e-15!83;UBERON:0003059!7.48e-15!83;UBERON:0007282!7.48e-15!83;UBERON:0009618!7.48e-15!83;UBERON:0007285!7.48e-15!83;UBERON:0005256!7.96e-15!143;UBERON:0000475!1.43e-13!365;UBERON:0002100!1.54e-13!216;UBERON:0000486!2.32e-13!82;UBERON:0004290!1.22e-12!70;UBERON:0000468!2.42e-12!659;UBERON:0003104!9.58e-12!238;UBERON:0009142!9.58e-12!238;UBERON:0001134!1.87e-11!61;UBERON:0002036!1.87e-11!61;UBERON:0003082!1.87e-11!61;UBERON:0000481!6.26e-11!347;UBERON:0002385!7.19e-11!63;UBERON:0001015!7.19e-11!63;UBERON:0000383!7.19e-11!63;UBERON:0003102!5.13e-09!95;UBERON:0000478!5.19e-09!24;UBERON:0005631!9.29e-09!14;UBERON:0000158!9.29e-09!14;UBERON:0000490!1.07e-08!138;UBERON:0004923!1.55e-08!57;UBERON:0000480!5.10e-08!626;UBERON:0000467!7.39e-08!625;UBERON:0004872!8.26e-08!84;UBERON:0002199!3.01e-07!45;UBERON:0002416!3.01e-07!45;UBERON:0000477!3.36e-07!286;UBERON:0000119!5.11e-07!312;UBERON:0003914!6.43e-07!118;UBERON:0000483!8.24e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.18e-09;24!UBERON:0005631;1.31e-07;10!UBERON:0000158;1.31e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.31e-14,160;UBERON:0009142,1.31e-14,160;UBERON:0005256,2.12e-14,122;UBERON:0000486,1.34e-13,83;UBERON:0007524,6.41e-13,73;UBERON:0002329,7.26e-13,71;UBERON:0003059,7.26e-13,71;UBERON:0007282,7.26e-13,71;UBERON:0004290,7.26e-13,71;UBERON:0009618,7.26e-13,71;UBERON:0003077,1.88e-12,72;UBERON:0007285,1.88e-12,72;UBERON:0001134,1.15e-11,62;UBERON:0002036,1.15e-11,62;UBERON:0003082,1.15e-11,62;UBERON:0007503,1.90e-11,78;UBERON:0002385,4.46e-11,64;UBERON:0001015,4.46e-11,64;UBERON:0000383,4.46e-11,64;UBERON:0002100,1.15e-10,199;UBERON:0000490,8.28e-10,148;UBERON:0003102,9.07e-10,99;UBERON:0000478,4.43e-09,24;UBERON:0005631,7.96e-09,14;UBERON:0000158,7.96e-09,14;UBERON:0004923,1.03e-08,66;UBERON:0002199,9.62e-08,46;UBERON:0002416,9.62e-08,46;UBERON:0004872,2.29e-07,83 | |||
|phase1_expression=37.6074245090052,36.8252901092491,43.6958652697511,30.0219895059391,56.7640589922655,73.276436024431,17.7309914717817,32.8494334181952,34.2153172941788,14.006834380586,12.5604210235037,57.2316394981051,47.2142891028932,16.3371585907262,27.505982185417,14.1188280754873,18.6835303687433,19.7183724404591,16.5897151588772,4.55547914884115,9.58803248847989,7.52291331547411,2.28988789704845,0.547497700291537,3.89182182743889,3.2857764471619,3.03772180964799,4.25038219093868,0,0,3.2511385896376,3.67768489791571,5.12050061923025,5.9160641626686,0,0.426507697462265,1.17440175733939,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0,0.449446968890169,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,2.10707267820062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.38978524163,15.4261197731836,18.0286212199378,28.9151321907653,24.0642197105227,27.955378159439,32.6067238290951,54.0164706035926,3.30871860074237,7.09534071880205,6.4119393555982,5.50112117090393,3.64295288292542,2.22470665670658,0,0,1.06366368415092,0,0,0,1.59009925893364,5.16140757063675,0.694281003215189,5.08777147731609,3.77549492588915,1.6507082516404,2.50793959844173,1.03366703667732,2.49036383880697,4.01664735317604,3.22263453687318,3.80136052859256,3.41686880567437,0.367663080345869,4.86085168729056,2.23249320710199,2.2452937262617,1.68917220724983,0,3.79706263827252,3.48083313467774,0,0,7.84969293856562,72.5579049475165,22.0337090296369,30.5865207678535,38.436107180341,21.6347713140998,28.0338800071154,9.60740961567345,16.7733932923669,16.4941848761876,8.48677234039035,10.2980998961479,27.3956944037326,23.62321290368,7.49828581868149,8.42832207441865,5.13424639390004,9.41526687476347,10.9214083738701,13.7592002712912,15.0282363171406,15.311562844117,10.072414019565,16.4287992069467,15.4440371446667,15.083282685992,10.0117749813183,17.2468354035897,10.100166837244,8.25782231154963,10.528436388399,16.6811495934718,20.2281945227353,16.375948420819,12.7044045139224,10.404598869954,26.0540014358652,25.0079643368283,21.606558918077,18.4464027336806,18.8077594233309,36.29278698466,23.6286865137773,17.2463499135322,12.1168211637175,23.9329736469978,42.8362050569852,20.5905563659636,12.2917559837721,15.0908927156334,6.57086900755209,11.7280831854059,6.88331028933609,6.34263271873896,6.89154795271723,13.3623034299946,12.1283434367983,11.8590799911545,8.39447925874409,43.8058690523485,23.7999147131368,13.8134921352481,28.7908115379827,41.869009936836,15.2615772051399,13.6553598963262,14.2196507631254,12.2426309732957,12.854887201452,14.4735077657769,11.460661193614,12.1657308377715,11.1576675514453,1.4763109092493,14.0241773803446,20.1671265552386,20.5812195939759,46.8993628840774,51.1070152672366,57.8974108547776,0,1.47586126251736,10.122500807613,11.3042793970884,4.49607013030478,8.44443368257699,2.59247646443883,7.16778271682714,4.15973914111831,4.3299402607582,8.69478037313076,20.6639301855046,12.4155145074523,8.33373922637899,12.1762657430143,0,0,0.738651018262192,2.57404691653161,0.743155811443641,17.8094284574876,29.2288903066016,8.93183112627035,14.8667147686728,5.81267877027924,14.9519244874432,7.38994856843915,3.96217953059517,1.86595303986695,3.45887888200707,2.65109110195398,2.92090313743978,2.29193055334967,0,5.13217338068116,4.73006466435288,1.50171528921959,1.71495859578347,9.75540433804638,13.950722202665,8.58057944105115,26.3714300145867,42.9187735022259,9.298330278116,31.3806977570147,39.5228260263191,10.0310875962235,18.4403871630262,9.85762062359568,21.7326550360384,43.9523500367069,21.4042487563,9.44634934451832,17.0588135396422,7.12756685640086,16.5791657382772,12.2014684204041,7.69792032101839,0,1.00451418286425,0,27.3172335260404,22.9723871668228,5.70547620162874,22.5858838401424,16.6435821265811,12.3552064635528,0,0,0.215627574859517,0.128343036279748,2.7950408664471,0,0,1.00509759200609,0,0,0,0,25.397138785862,17.005797716029,11.9356610427884,39.3064928293225,38.1838036025926,38.3216868532461,39.4766568525443,30.0946099727719,15.9185252839189,12.4167685551006,17.2698655619213,16.5932251687533,15.8997014476592,11.356467132839,17.8434580381645,0,0,0,15.4595061437592,48.2662774580442,45.358543999452,38.952925827548,35.7566397761185,32.8372310486696,45.7456762842852,28.6556059477354,38.122379311035,31.1677939534481,7.86469438393543,14.2049380250502,8.45909706942234,11.9428518712233,9.06440951987682,2.65890789101569,31.2790093673124,5.70902131402557,12.5147748499421,15.8419316165844,21.3732796383861,2.25599806453706,4.00479752942957,4.70609861506113,4.38417673959782,2.21658420675039,2.27466768141793,2.04112446331819,4.53423423814493,1.54227252690289,5.96082162596476,7.02365683396795,1.01950509218015,1.66215201785745,1.56712328305525,0.877039506583738,0.784306353074702,0.769350375349168,3.93617574839647,2.27764876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| |||
|short_description=p1@TMEM45A | |||
}} |
Revision as of 20:11, 21 January 2014
Short description: | p1@TMEM45A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM45A_5end |
Coexpression cluster: | C4255_Adipocyte_amniotic_Smooth_Chondrocyte_chorionic_Ewing_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000323523, ENST00000403410, NM_018004, uc003dtz.1_5end |
EntrezGene: | TMEM45A |
HGNC: | 25480 |
UniProt: | Q9NWC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.28e-15 | 76 |
muscle precursor cell | 3.32e-12 | 58 |
myoblast | 3.32e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.32e-12 | 58 |
muscle cell | 1.70e-11 | 55 |
extraembryonic cell | 8.31e-11 | 19 |
electrically responsive cell | 3.95e-10 | 61 |
electrically active cell | 3.95e-10 | 61 |
smooth muscle cell | 5.68e-10 | 43 |
smooth muscle myoblast | 5.68e-10 | 43 |
vascular associated smooth muscle cell | 2.48e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.31e-14 | 160 |
entire embryonic mesenchyme | 1.31e-14 | 160 |
trunk mesenchyme | 2.12e-14 | 122 |
multilaminar epithelium | 1.34e-13 | 83 |
dense mesenchyme tissue | 6.41e-13 | 73 |
somite | 7.26e-13 | 71 |
presomitic mesoderm | 7.26e-13 | 71 |
presumptive segmental plate | 7.26e-13 | 71 |
dermomyotome | 7.26e-13 | 71 |
trunk paraxial mesoderm | 7.26e-13 | 71 |
paraxial mesoderm | 1.88e-12 | 72 |
presumptive paraxial mesoderm | 1.88e-12 | 72 |
skeletal muscle tissue | 1.15e-11 | 62 |
striated muscle tissue | 1.15e-11 | 62 |
myotome | 1.15e-11 | 62 |
epithelial vesicle | 1.90e-11 | 78 |
muscle tissue | 4.46e-11 | 64 |
musculature | 4.46e-11 | 64 |
musculature of body | 4.46e-11 | 64 |
trunk | 1.15e-10 | 199 |
unilaminar epithelium | 8.28e-10 | 148 |
surface structure | 9.07e-10 | 99 |
extraembryonic structure | 4.43e-09 | 24 |
extraembryonic membrane | 7.96e-09 | 14 |
membranous layer | 7.96e-09 | 14 |
organ component layer | 1.03e-08 | 66 |
integument | 9.62e-08 | 46 |
integumental system | 9.62e-08 | 46 |
splanchnic layer of lateral plate mesoderm | 2.29e-07 | 83 |