FFCP PHASE1:Hg19::chr3:130569381..130569392,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27032 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13211 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z3X9,G3XAH8,P98194,B4E2Q0,B4DSW3 | |||
|association_with_transcript=12bp_to_NM_001199180,NM_001199181,NM_001199182_5end | |||
|coexpression_cluster_id=C2719 | |||
|description=CAGE_peak_15_at_ATP2C1_5end | |||
|id=chr3:130569381..130569392,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.23e-29!112;CL:0000049!1.23e-29!112;CL:0000988!1.15e-28!182;CL:0000037!7.35e-28!172;CL:0000566!7.35e-28!172;CL:0002032!1.53e-25!165;CL:0000837!1.53e-25!165;CL:0002057!5.77e-21!42;CL:0000557!1.09e-19!71;CL:0000860!5.88e-19!45;CL:0000738!8.49e-19!140;CL:0000839!1.42e-18!70;CL:0000766!1.86e-18!76;CL:0002031!1.27e-16!124;CL:0002009!1.08e-15!65;CL:0002194!7.66e-14!63;CL:0000576!7.66e-14!63;CL:0000040!7.66e-14!63;CL:0000559!7.66e-14!63;CL:0002087!3.99e-12!119;CL:0002274!8.02e-08!5;CL:0000457!8.02e-08!5;CL:0002191!8.02e-08!5;CL:0000097!8.02e-08!5;CL:0000831!8.02e-08!5;CL:0002028!8.02e-08!5;CL:0000080!8.09e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.75e-28;33!CL:0002057;2.75e-28;33!CL:0000473;8.27e-20;39!CL:0000234;8.27e-20;39!CL:0000576;2.02e-14;48!CL:0001014;3.50e-12;2!CL:0001016;3.50e-12;2!CL:0000766;3.10e-11;69!CL:0002087;1.93e-07;104!CL:0000763;2.47e-07;100!CL:0000037;3.46e-07;1!CL:0001024;3.46e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.57e-31,42;CL:0002057,9.57e-31,42;CL:0000473,1.79e-26,48;CL:0000234,1.79e-26,48;CL:0000557,1.48e-25,67;CL:0002009,2.35e-25,61;CL:0000988,1.56e-22,177;CL:0000763,2.82e-22,108;CL:0000049,2.82e-22,108;CL:0002194,1.72e-20,59;CL:0000576,1.72e-20,59;CL:0000040,1.72e-20,59;CL:0000559,1.72e-20,59;CL:0000839,1.80e-20,66;CL:0000037,1.44e-18,168;CL:0000766,1.73e-18,72;CL:0002032,6.96e-18,161;CL:0000837,6.96e-18,161;CL:0002031,1.58e-17,120;CL:0000738,6.23e-15,136;CL:0002087,3.15e-13,115;CL:0001014,3.92e-12,2;CL:0001016,3.92e-12,2;CL:0001024,3.57e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;6.30e-22;42 | |||
|ontology_enrichment_disease=DOID:1240!4.59e-08!39;DOID:8692!2.61e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:9119;3.46e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,3.36e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.45e-21!102;UBERON:0003061!5.45e-21!102;UBERON:0002193!8.35e-18!112;UBERON:0002371!1.78e-17!80;UBERON:0001474!1.92e-15!86;UBERON:0004765!2.90e-12!101;UBERON:0001434!2.90e-12!101;UBERON:0002405!4.53e-12!115;UBERON:0001869!2.75e-07!32 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.31e-27,98;UBERON:0003061,1.31e-27,98;UBERON:0002371,9.22e-25,76;UBERON:0002193,1.32e-24,108;UBERON:0001474,1.17e-22,82;UBERON:0004765,2.76e-20,90;UBERON:0002405,1.69e-19,93;UBERON:0001434,7.56e-18,100;UBERON:0003081,8.90e-11,203;UBERON:0002204,4.93e-09,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,1.06730766284929,0.787107813136792,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,3.22960483268332,1.66198622559563,1.40381113229099,0.651032612147555,0,0,0,0.145398238779565,0,0,0.929716147622738,0,2.47765096716083,0.28769239232215,0.256160706529101,1.41889337933151,2.41321976515633,3.22742341791913,5.41705946377367,0,0,0.674170453335254,0.612167784741805,2.24650318953266,2.55734850319616,0,0,0.426224750532694,2.32167390902867,2.8369261234557,1.86846674698672,0.502497330513487,0,1.73751075764093,2.42159801053347,7.36555271975129,6.0127853613768,0,0,0,0,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28685314316103,3.92355994087075,2.37045676297569,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.468008530278475,0,0,0,0,0,0,0,1.97065295158377,0.352193736052904,0.621984346622316,0.576479813667846,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08006287447623,0,0,0,0,0,0,0,0,0.399158742865633,3.4470966623826,0.423347165447766,0,1.40398589056729,0,0.156679895773023,2.50634477090067,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0.835218521685727,0,0.270455678475983,3.3307196799782,0,0,0,0,2.00598091699461,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0.886642856860642,0,0,0,0,0.227884111694002,0,0,0,0.31900115973192,0,0,2.04386596391473,0.31396051279005,0.997270091400938,0,0,0,0.189753732724185,0,0,0,0,0.649165919226273,0,0,0,5.33738031625119,3.45979029050208,3.13265848516366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,3.14963448172101,1.5476039091159,0.303747783290123,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.124192805882767,0,0.249960815924213,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.132864840313363,0,0,0.737318726261158,0,0.19998739585493,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0.781078098613847,0.413373593002368,0,0,0,0,0,0.127762427639595,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.803892390468535,0,0,0.426467963801962,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@ATP2C1 | |||
}} |
Revision as of 21:21, 21 January 2014
Short description: | p15@ATP2C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_ATP2C1_5end |
Coexpression cluster: | C2719_CD14_CD34_immature_CD133_acute_Macrophage_pharyngeal |
Association with transcript: | 12bp_to_NM_001199180, NM_001199181, NM_001199182_5end |
EntrezGene: | ATP2C1 |
HGNC: | 13211 |
UniProt: | B7Z3X9G3XAH8P98194B4E2Q0B4DSW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.57e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.57e-31 | 42 |
defensive cell | 1.79e-26 | 48 |
phagocyte | 1.79e-26 | 48 |
granulocyte monocyte progenitor cell | 1.48e-25 | 67 |
macrophage dendritic cell progenitor | 2.35e-25 | 61 |
hematopoietic cell | 1.56e-22 | 177 |
myeloid cell | 2.82e-22 | 108 |
common myeloid progenitor | 2.82e-22 | 108 |
monopoietic cell | 1.72e-20 | 59 |
monocyte | 1.72e-20 | 59 |
monoblast | 1.72e-20 | 59 |
promonocyte | 1.72e-20 | 59 |
myeloid lineage restricted progenitor cell | 1.80e-20 | 66 |
hematopoietic stem cell | 1.44e-18 | 168 |
myeloid leukocyte | 1.73e-18 | 72 |
hematopoietic oligopotent progenitor cell | 6.96e-18 | 161 |
hematopoietic multipotent progenitor cell | 6.96e-18 | 161 |
hematopoietic lineage restricted progenitor cell | 1.58e-17 | 120 |
leukocyte | 6.23e-15 | 136 |
nongranular leukocyte | 3.15e-13 | 115 |
CD1a-positive Langerhans cell | 3.92e-12 | 2 |
immature CD1a-positive Langerhans cell | 3.92e-12 | 2 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.31e-27 | 98 |
blood island | 1.31e-27 | 98 |
bone marrow | 9.22e-25 | 76 |
hemolymphoid system | 1.32e-24 | 108 |
bone element | 1.17e-22 | 82 |
skeletal element | 2.76e-20 | 90 |
immune system | 1.69e-19 | 93 |
skeletal system | 7.56e-18 | 100 |
lateral plate mesoderm | 8.90e-11 | 203 |
musculoskeletal system | 4.93e-09 | 167 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 3.36e-07 | 1 |