FFCP PHASE1:Hg19::chr3:149087431..149087444,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4071 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11853 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-476bp_to_X75684_5end | |||
|description=CAGE_peak_5_at_TM4SF1_5end | |||
|id=chr3:149087431..149087444,- | |||
|ontology_enrichment_celltype=CL:0000222!2.23e-12!119;CL:0000066!8.58e-09!254;CL:0000359!3.59e-08!32;CL:0002078!3.59e-08!44;CL:0000220!1.17e-07!246;CL:0000183!2.18e-07!59;CL:0002321!2.20e-07!248;CL:0002139!2.45e-07!24;CL:0002494!7.16e-07!16;CL:0000192!8.54e-07!42;CL:0000514!8.54e-07!42;CL:0000187!8.56e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002494;2.69e-09;16!CL:0002144;1.66e-08;3!CL:0002595;1.95e-08;5!CL:0000359;2.28e-07;32!CL:0000569;6.79e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.49e-09,121;CL:0002494,2.54e-09,16;CL:0002595,1.51e-08,5;CL:0002144,1.55e-08,3;CL:0000359,2.91e-07,32;CL:0000569,6.98e-07,4;CL:0000011,6.98e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000011;6.79e-07;4 | |||
|ontology_enrichment_disease=DOID:305!9.64e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.34e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.53e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0003914!2.08e-15!118;UBERON:0003104!6.36e-14!238;UBERON:0009142!6.36e-14!238;UBERON:0000055!1.03e-13!69;UBERON:0002049!2.01e-13!79;UBERON:0007798!2.01e-13!79;UBERON:0004872!2.96e-13!84;UBERON:0001009!1.27e-12!113;UBERON:0004535!3.42e-12!110;UBERON:0001981!3.63e-11!60;UBERON:0007500!3.63e-11!60;UBERON:0004537!3.63e-11!60;UBERON:0006965!3.63e-11!60;UBERON:0000477!4.83e-11!286;UBERON:0000926!7.57e-11!448;UBERON:0004120!7.57e-11!448;UBERON:0006603!7.57e-11!448;UBERON:0000481!3.68e-10!347;UBERON:0007100!5.24e-10!27;UBERON:0000948!9.28e-10!24;UBERON:0005498!9.28e-10!24;UBERON:0004140!9.28e-10!24;UBERON:0009881!9.28e-10!24;UBERON:0004141!9.28e-10!24;UBERON:0003084!9.28e-10!24;UBERON:0007005!9.28e-10!24;UBERON:0004139!9.28e-10!24;UBERON:0004291!9.28e-10!24;UBERON:0001048!2.18e-09!168;UBERON:0003103!4.11e-09!69;UBERON:0000490!1.34e-08!138;UBERON:0001637!2.04e-08!42;UBERON:0003509!2.04e-08!42;UBERON:0004572!2.04e-08!42;UBERON:0001737!3.03e-08!9;UBERON:0002100!3.65e-08!216;UBERON:0004111!5.63e-08!241;UBERON:0005256!1.00e-07!143;UBERON:0000467!1.56e-07!625;UBERON:0000480!1.99e-07!626;UBERON:0004573!2.16e-07!33;UBERON:0004571!2.16e-07!33;UBERON:0000119!4.24e-07!312;UBERON:0008947!4.58e-07!38;UBERON:0003258!4.58e-07!38;UBERON:0000483!7.73e-07!309;UBERON:0001041!9.53e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.60e-16;9!UBERON:0001557;4.60e-16;9!UBERON:0000948;6.97e-10;22!UBERON:0003513;3.16e-09;7!UBERON:0010523;1.66e-08;3!UBERON:0001915;1.66e-08;3!UBERON:0001982;1.66e-08;3!UBERON:0007100;1.94e-08;25!UBERON:0003834;1.95e-08;5!UBERON:0001533;1.95e-08;5!UBERON:0000992;7.50e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.46e-16,9;UBERON:0004535,6.60e-13,109;UBERON:0004872,1.13e-12,83;UBERON:0001009,2.37e-12,112;UBERON:0000055,3.79e-12,68;UBERON:0002049,4.51e-11,78;UBERON:0007798,4.51e-11,78;UBERON:0003914,1.07e-10,117;UBERON:0000948,1.21e-10,24;UBERON:0005498,1.21e-10,24;UBERON:0004140,1.21e-10,24;UBERON:0009881,1.21e-10,24;UBERON:0004141,1.21e-10,24;UBERON:0003084,1.21e-10,24;UBERON:0007005,1.21e-10,24;UBERON:0004139,1.21e-10,24;UBERON:0004291,1.21e-10,24;UBERON:0007500,1.58e-09,59;UBERON:0001981,1.58e-09,59;UBERON:0004537,1.58e-09,59;UBERON:0006965,1.58e-09,59;UBERON:0003513,2.48e-09,7;UBERON:0007100,3.46e-09,27;UBERON:0001557,7.54e-09,19;UBERON:0003834,1.51e-08,5;UBERON:0001533,1.51e-08,5;UBERON:0010523,1.55e-08,3;UBERON:0001915,1.55e-08,3;UBERON:0001982,1.55e-08,3;UBERON:0001637,2.82e-07,42;UBERON:0003509,2.82e-07,42;UBERON:0004572,2.82e-07,42;UBERON:0004573,4.57e-07,33;UBERON:0004571,4.57e-07,33;UBERON:0001048,5.63e-07,160;UBERON:0000992,7.64e-07,13 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0,0,0,2.65117900582333,0,0.602694528023977,0,0.487932798790507,0.246242116153576,0.408001382488506,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,2.1686349143074,0,1.15877215168659,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.347140501607594,0,0,0.550236083880135,0.208994966536811,2.06733407335463,1.06729878806013,1.00416183829401,4.02829317109147,2.28081631715554,1.46437234528902,2.94130464276695,0,0.892997282840798,0.898117490504679,0.563057402416611,0,0,0,0,0,0.436094052142534,0,0,0,2.0078563452417,0,0,1.06748995729705,0.24666754841716,0.622422070799533,2.69421344139376,3.92308567472301,3.48122083583342,0,0,0.624320153660641,0,0,1.40921398372518,0.485618833104395,0.140450806702248,0,0.245668634623536,0,0,0,0,0.718618141816238,0.505008341862199,0.125118519871964,0,0,0,0.300476117813194,0.567160915800105,0.538168907066586,0,0,0.300091096084402,0.309157587715317,0.257640540045629,0,0,0.779496041289589,0,0,0.646584227275248,0.355009592516614,1.41052937518696,0.169560592310488,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,1.41968160047813,1.51726221070292,1.44606617930089,1.7647035637183,2.39667388501647,0.71181185733329,2.56179485504312,1.96221465125346,1.15424147083917,5.90524363699719,0,0,0,0,0,0,0,0.368965315629341,0,0.219500570817251,0,0,0.0925884451585296,0,1.03993478527958,0,0,0.117408694235822,0.288732895522148,0.925971025153221,1.71228737011138,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,0,0.2933531432838,0,0,0.845302752556,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0.325736184293735,0.355391948742546,0,1.50719688529793,0,1.09970290300263,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,2.44138521329762,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0.368738337083406,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0.519254429183621,1.04589340613963,0,0,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,2.27466768141793,4.08224892663638,0.215915916102139,0,0,0.501689773854853,0.509752546090077,0,0.447749509444357,0,0,0.769350375349168,0.328014645699706,0.325378394664303,0.206082023295445,0,0,0,0.650060246036521,0,0,1.54048617114644,0.767518373630648,1.51620229732984,0.322260734604821,0,0.255679882248303,0,0.165284915360978,0.192190067365106,0.255225424989168,0,0,1.5740617341532,1.3940745403212,0.924100740528266,0.532306030317022,0,0.74129687641568,0.715624433709956,0.372158369359667,0.316379424718726,0.762520775695299,0,0,0,2.35484592059769,0.179872457583315,0,0,0.606547444719948,1.58510321173008,2.52755073743389,0,1.94970791705028,2.11300293513511,0.409499734223957,0.141405431953713,1.13008116620243,0,1.32687795048244,7.0152141640602,1.15755106853338,0,0.202910376962704,0,3.94373843545138,0.143411352204052,0,0,0,0.633322905892992,1.31717957183961,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0.222617410045812,0,0,0.398495976502139,0,0,0,0,0.311039587661807,1.43789361835723,2.14825409610731,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0.349839999984783,0,0.227586896570999,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0.21787692703798,0.41827123283581,0.0769502585037971,0,0,0,0,0,0,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,1.26598838716816,0.489698424477443,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0,0,0,1.69946265673865,0,0,0,0.063186579628488,0,0,0.664653872707185,1.323967823502,0,0,0,0.277349346026277,0,0.587954384486266,0.34823682632161,0.17472666824203,1.0319161948297,1.64485763191445,0.730893170861856,1.64230914106418,0.0969890164884194,0,0,0.411125773940253,0.19871461170299,0,0,0.400794101257669,0,0,0.144090417154106,0,0,0.576219191952599,0.124252535565433,0.235694034616795,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0,0.279282401272254,0.458320848023367,2.15361907373044,0,0.429226048136571,0.89268582976749,0,0,0,0.472699093843342,0.576911008668165,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0.316801009558219,1.07572403599707,0,0.714695326373367,1.32418394073086,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0.342173675768659,0.704815022316672,0.320362237703084,0.157204305099666,0.828478110694391,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,1.88212655758537,0,0,0.149254802886874,0,0,14.3946284009068,8.804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| |||
|short_description=p5@TM4SF1 | |||
}} |
Revision as of 21:55, 21 January 2014
Short description: | p5@TM4SF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TM4SF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -476bp_to_X75684_5end |
EntrezGene: | TM4SF1 |
HGNC: | 11853 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.49e-09 | 121 |
cardiocyte | 2.54e-09 | 16 |
smooth muscle cell of the subclavian artery | 1.51e-08 | 5 |
capillary endothelial cell | 1.55e-08 | 3 |
vascular associated smooth muscle cell | 2.91e-07 | 32 |
cardiac mesenchymal cell | 6.98e-07 | 4 |
migratory trunk neural crest cell | 6.98e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.53e-11 | 14 |