FFCP PHASE1:Hg19::chr3:190231891..190231903,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3556 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5995 | |||
|TSSclassifier=strong | |||
|UniProt=C9J9W1,Q9NPH3 | |||
|association_with_transcript=0bp_to_ENST00000317757,ENST00000342550,ENST00000413869,ENST00000422940,ENST00000434491,ENST00000461629,uc003fsk.2,uc003fsl.2,uc003fsm.1,uc003fsn.1,uc003fso.1,uc003fsp.1,uc003fsq.2,uc010hzf.2,uc010hzg.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_IL1RAP_5end | |||
|id=chr3:190231891..190231903,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.40e-21!42;CL:0000860!3.39e-18!45;CL:0000766!7.27e-17!76;CL:0002009!2.81e-13!65;CL:0000557!4.00e-13!71;CL:0000763!9.94e-13!112;CL:0000049!9.94e-13!112;CL:0002194!3.17e-12!63;CL:0000576!3.17e-12!63;CL:0000040!3.17e-12!63;CL:0000559!3.17e-12!63;CL:0000839!1.44e-11!70;CL:0000738!2.36e-08!140;CL:0000037!8.52e-07!172;CL:0000566!8.52e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-35;33!CL:0002057;1.02e-35;33!CL:0000473;1.07e-23;39!CL:0000234;1.07e-23;39!CL:0000576;8.69e-19;48!CL:0000766;6.24e-14;69!CL:0000094;9.37e-11;8!CL:0000763;5.44e-08;100!CL:0000081;3.38e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.50e-36,42;CL:0002057,9.50e-36,42;CL:0000766,1.25e-32,72;CL:0000473,2.03e-29,48;CL:0000234,2.03e-29,48;CL:0002009,2.25e-27,61;CL:0000557,5.54e-26,67;CL:0002194,2.57e-25,59;CL:0000576,2.57e-25,59;CL:0000040,2.57e-25,59;CL:0000559,2.57e-25,59;CL:0000763,2.18e-24,108;CL:0000049,2.18e-24,108;CL:0000839,2.04e-23,66;CL:0000738,1.17e-17,136;CL:0000037,8.12e-15,168;CL:0002032,2.83e-14,161;CL:0000837,2.83e-14,161;CL:0000988,4.84e-13,177;CL:0002087,1.40e-12,115;CL:0002031,2.64e-12,120;CL:0000094,9.94e-11,8;CL:0000081,3.51e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.98e-26;42!CL:0000049;9.61e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.31e-13!102;UBERON:0003061!8.31e-13!102;UBERON:0002193!1.43e-10!112;UBERON:0002371!4.81e-10!80;UBERON:0002405!9.20e-09!115;UBERON:0001474!4.56e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.85e-07;15!UBERON:0000179;1.85e-07;15!UBERON:0000463;1.85e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.22e-26,98;UBERON:0003061,3.22e-26,98;UBERON:0002193,4.21e-23,108;UBERON:0002371,4.80e-21,76;UBERON:0001474,2.17e-18,82;UBERON:0002405,3.85e-17,93;UBERON:0004765,3.86e-17,90;UBERON:0001434,6.26e-14,100;UBERON:0000178,1.46e-07,15;UBERON:0000179,1.46e-07,15;UBERON:0000463,1.46e-07,15;UBERON:0003081,9.48e-07,203 | |||
|phase1_expression=0.908391896352783,0,0.845726424575827,0,0.446961094427288,0.872338524100369,0,0,0,0,0.697801167972428,0,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,2.36018566109342,3.45446458287491,5.57338043937874,0.919421224478927,3.0120591877825,1.84877005083394,0,0,0.587200878669695,3.87796785972314,3.00816671205213,3.25516306073778,0,0,0,10.4686731921287,12.4699061417307,10.1885305698883,7.90258725479328,13.9797081927421,13.6270803193846,16.1107739700404,20.4928565223281,16.3172738623124,15.8583013138845,18.0735711403471,12.1883837934908,9.78860165621544,9.5517152520246,8.31476892446813,19.2832852193669,14.4418062184242,18.5407766481722,11.5447955065351,15.9570926097305,12.3605177654481,12.4789972610291,11.3477044938228,6.22822248995575,13.3161792586074,14.0800387973454,13.2485195270121,6.05399502633369,18.7821594353658,11.7091083353127,0.211255286311942,0.850417199860174,1.67726916406701,2.02191536063691,1.80212271409808,2.4108838004562,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0,0.954053754535364,1.70763890732835,0.587237189370939,0,0,1.12101712596307,0.263384084775077,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0.589211814949674,0,0.541607727530031,0.128091319725675,0.390178042679635,0.164437904603676,0,0.289803085735052,0.14828656316206,0.535081656179426,1.04535523804977,0,0.766440987203842,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,1.4206635122641,0.821127996921047,1.41124720257313,0.802320587350522,1.15859523106239,0,0,0.639312809217652,0.361439152384566,0,0,0.795285947051099,0.486634870302636,0.189069634328136,0.221729397462564,0.263504357079378,0.261958150995425,0.728590576585084,0.741568885568859,7.7891374477124,5.74628133087582,5.85015026283007,0.238490624305342,0.571994910780128,0,0,0,0,0.56530794192401,0,0.275118041940067,0.208994966536811,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,38.2163210564583,46.533631697799,0.436094052142534,0,0.12663051166458,0.662045904066094,0.860509862246441,0,1.12135520028461,0,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0.151357427644931,0.576175924479999,0,0,1.1409436430889,0,0.117434498643765,0,0,0.61246251376468,0,0.206651562351531,0,0,0,0,0,0.250237039743928,0.277064115484183,0,0.30648779579902,0,0.907457465280168,0.717558542755448,0,1.27159140695737,0.600182192168805,0.206105058476878,0.772921620136887,0.930584281657949,0.506328996723799,0.584622030967192,0.504867548488229,0.276149695926898,0,0,0.10075209822764,0.169560592310488,0.57978255948989,1.36373060295417,4.30206893083506,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0.36497735907583,1.56449532329816,0.643240938192885,0,0.464367928031979,0,1.65629520055781,1.85443159085912,2.16909926895134,1.10293972732394,0.217879444092406,1.18635309555548,1.34831308160164,1.17732879075208,3.07797725557112,0,0,0,0,7.60530208930985,4.91413608338813,3.54473944008842,0,0.245976877086227,0.343135620597051,1.75600456653801,0,2.41269533787914,3.61094936118265,0,0,1.44331342025273,0,0.234817388471643,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,1.00789276919316,2.69372684760534,1.43293636324557,2.03443756959773,0.766765358330422,1.97065295158377,0,0.621984346622316,1.15295962733569,0.88369703398466,0.317489471460845,0.381988425558278,0,0,0.616964956219941,0.901029173531752,0.285826432630578,0,0,0.07333828582095,1.42198887333556,0,0,0.531876233169741,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,3.48613383440118,1.79951384127703,0,0,0,0.718874566474748,0,0,0,0,0.716243852959582,0.112085143993527,0.394061520403854,0.431255149719035,1.15508732651774,0.508189248444927,0,0,0,0,52.4304916763028,29.9161459204025,68.7929752303819,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,1.6541442089831,3.01999881146064,1.81436848265855,0.606255142892519,0,0.30239029332968,0.496215615637554,0.767309866440312,1.12264037773229,0.768834895534206,0.511707249066704,0.64341568457443,0,0,0,0.0821271560138091,0,0.116210378459959,0,1.20303882181971,0.552485933615378,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.976135183992909,3.60643540767028,0,0,2.87132768998086,1.95018073810956,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,3.30569830721956,4.03599141466723,13.5269475244259,0.6069466851333,0,2.51849877464512,0,0,0,0,0.37064843820784,0.286249773483982,0.372158369359667,0.316379424718726,0.38126038784765,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,1.46228093778771,0,0.136499911407986,0.282810863907425,0,0,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0.35667105148125,0,0,0,0,0.349934720244983,1.63577591633371,3.35151137767894,1.08890984861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| |||
|short_description=p2@IL1RAP | |||
}} |
Revision as of 23:18, 21 January 2014
Short description: | p2@IL1RAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IL1RAP_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000317757, ENST00000342550, ENST00000413869, ENST00000422940, ENST00000434491, ENST00000461629, uc003fsk.2, uc003fsl.2, uc003fsm.1, uc003fsn.1, uc003fso.1, uc003fsp.1, uc003fsq.2, uc010hzf.2, uc010hzg.1_5end |
EntrezGene: | IL1RAP |
HGNC: | 5995 |
UniProt: | C9J9W1Q9NPH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.50e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.50e-36 | 42 |
myeloid leukocyte | 1.25e-32 | 72 |
defensive cell | 2.03e-29 | 48 |
phagocyte | 2.03e-29 | 48 |
macrophage dendritic cell progenitor | 2.25e-27 | 61 |
granulocyte monocyte progenitor cell | 5.54e-26 | 67 |
monopoietic cell | 2.57e-25 | 59 |
monocyte | 2.57e-25 | 59 |
monoblast | 2.57e-25 | 59 |
promonocyte | 2.57e-25 | 59 |
myeloid cell | 2.18e-24 | 108 |
common myeloid progenitor | 2.18e-24 | 108 |
myeloid lineage restricted progenitor cell | 2.04e-23 | 66 |
leukocyte | 1.17e-17 | 136 |
hematopoietic stem cell | 8.12e-15 | 168 |
hematopoietic oligopotent progenitor cell | 2.83e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.83e-14 | 161 |
hematopoietic cell | 4.84e-13 | 177 |
nongranular leukocyte | 1.40e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 2.64e-12 | 120 |
granulocyte | 9.94e-11 | 8 |
blood cell | 3.51e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.22e-26 | 98 |
blood island | 3.22e-26 | 98 |
hemolymphoid system | 4.21e-23 | 108 |
bone marrow | 4.80e-21 | 76 |
bone element | 2.17e-18 | 82 |
immune system | 3.85e-17 | 93 |
skeletal element | 3.86e-17 | 90 |
skeletal system | 6.26e-14 | 100 |
blood | 1.46e-07 | 15 |
haemolymphatic fluid | 1.46e-07 | 15 |
organism substance | 1.46e-07 | 15 |
lateral plate mesoderm | 9.48e-07 | 203 |