FFCP PHASE1:Hg19::chr4:170533339..170533351,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4750 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7744 | |||
|TSSclassifier=weak | |||
|UniProt=Q96PY6 | |||
|association_with_transcript=262bp_to_uc003isb.1,uc003isc.1_5end | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_3_at_NEK1_5end | |||
|id=chr4:170533339..170533351,- | |||
|ontology_enrichment_celltype=CL:0000738!2.31e-24!140;CL:0000037!3.32e-21!172;CL:0000566!3.32e-21!172;CL:0002032!1.37e-19!165;CL:0000837!1.37e-19!165;CL:0000988!4.70e-19!182;CL:0002031!5.10e-19!124;CL:0000838!1.36e-17!52;CL:0000542!4.25e-17!53;CL:0000051!4.25e-17!53;CL:0002087!1.72e-15!119;CL:0000624!1.07e-11!6;CL:0000094!6.05e-11!8;CL:0000791!2.52e-10!18;CL:0000789!2.52e-10!18;CL:0002420!2.52e-10!18;CL:0002419!2.52e-10!18;CL:0000790!2.52e-10!18;CL:0002393!2.17e-08!9;CL:0002397!2.17e-08!9;CL:0000084!7.25e-08!25;CL:0000827!7.25e-08!25;CL:0000945!1.31e-07!24;CL:0000826!1.31e-07!24;CL:0000081!1.49e-07!11;CL:0000766!5.74e-07!76;CL:0000623!6.51e-07!3;CL:0000825!6.51e-07!3;CL:0000236!9.34e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000624;7.45e-33;6!CL:0000791;7.78e-24;18!CL:0000789;7.78e-24;18!CL:0002419;7.78e-24;18!CL:0000094;1.53e-23;8!CL:0000623;3.93e-18;3!CL:0000898;4.34e-17;3!CL:0000081;5.47e-17;11!CL:0000226;7.70e-17;3!CL:0000842;7.70e-17;3!CL:0000767;8.59e-17;3!CL:0000084;1.00e-16;25!CL:0000542;5.49e-13;53!CL:0000815;8.58e-12;2!CL:0000792;8.58e-12;2!CL:0000771;8.58e-12;2!CL:0002677;8.58e-12;2!CL:0002393;2.19e-08;6!CL:0002397;2.19e-08;6!CL:0000895;5.26e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,6.49e-33,6;CL:0000738,1.08e-25,136;CL:0000791,7.08e-24,18;CL:0000789,7.08e-24,18;CL:0002420,7.08e-24,18;CL:0002419,7.08e-24,18;CL:0000790,7.08e-24,18;CL:0000094,1.53e-23,8;CL:0000838,2.45e-21,52;CL:0000542,7.14e-21,53;CL:0000051,7.14e-21,53;CL:0000037,1.01e-19,168;CL:0000988,1.99e-18,177;CL:0000623,4.16e-18,3;CL:0000825,4.16e-18,3;CL:0000898,3.68e-17,3;CL:0000081,5.47e-17,11;CL:0000226,7.92e-17,3;CL:0000842,7.92e-17,3;CL:0000767,8.36e-17,3;CL:0000084,9.36e-17,25;CL:0000827,9.36e-17,25;CL:0002087,1.59e-16,115;CL:0002032,6.60e-16,161;CL:0000837,6.60e-16,161;CL:0002031,2.04e-12,120;CL:0000815,7.28e-12,2;CL:0000792,7.28e-12,2;CL:0002677,7.28e-12,2;CL:0000771,8.12e-12,2;CL:0000810,5.26e-07,1;CL:0000895,5.26e-07,1;CL:0002436,5.26e-07,1;CL:0002427,5.26e-07,1;CL:0002428,5.26e-07,1;CL:0002429,5.26e-07,1;CL:0002433,5.26e-07,1;CL:0002431,5.26e-07,1;CL:0002432,5.26e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;7.78e-24;18!CL:0000051;5.49e-13;53!CL:0002427;5.26e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90046415273356,8.06041736004147,1.54816123316076,0,0,0,0.542270404062111,0.142169232487422,0,2.21598163412751,1.60435557976113,2.17010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.449446968890169,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0,0,0,0,0.285012743741249,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0,0,0.574752439954483,0,0,16.507176104174,12.3319809767897,13.379562984383,0,3.36305137788922,0,7.47497126432566,8.64623678048162,14.5977064289652,0.334372990781356,7.82213439920617,1.89379122293893,0,0.445641827540694,2.65145316727353,2.43687284041983,2.43723477388514,0.25618263945135,0.520237390239513,0.328875809207352,0,0,6.96946846861684,3.21048993707656,1.04535523804977,0.226618685395132,10.7301738208538,7.90343124610049,9.36172860472161,0,0,0,0.150575119077773,0,0,0,0,28.8297642811367,15.7789715512269,12.8893719455691,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44024217006613,0.621984346622316,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,24.6288450252409,14.4470475155877,15.4011643535698,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78950473144085,4.96142661882819,3.30855429190677,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0.144269212976445,0.213425530045242,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0.994147647766298,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0.189559738885464,0.450970258243478,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0,0,0,0.617792886840502,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0.449947783103001,1.5476039091159,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0.303298235083296,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.339848664884159,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@NEK1 | |||
}} |
Revision as of 03:57, 22 January 2014
Short description: | p3@NEK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NEK1_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 262bp_to_uc003isb.1, uc003isc.1_5end |
EntrezGene: | NEK1 |
HGNC: | 7744 |
UniProt: | Q96PY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data